Os07g0461700

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0461700| Description = FAR1 domain containing protein| Version = NM_001188261.1 GI:297725652 GeneID:9269168| Length = 2041 bp| Definition ...")
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Gene Name

Os07g0461700

Description

FAR1 domain containing protein

Version

NM_001188261.1 GI:297725652 GeneID:9269168

Length

2041 bp

Definition

Oryza sativa Japonica Group Os07g0461700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16867332..16869372

Sequence Coding Region

16867332..16867753,16867862..16869221,16869343..16869372

Expression

GEO Profiles:Os07g0461700

Genome Context

<gbrowseImage1> name=NC_008400:16867332..16869372 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16867332..16869372 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaggctacaagtgtgggtgagagatgctgaagttctgaggacagcactgcttgaagctggaatagtcacaggacccacaagtattttgcaagttgatgctggggatggatttgaaatagaaccagtaaatcgaactggaggatctgaaatggaggctgaaacaagtgtgaatgagcaggctacaagtgtgggtgagaaggatatagatgctgaagttctgagggcagcactgcttaaagctggaatagtggcaggacccacgagtattttgcaagttgatgctggggatggacttgaaatagaaccagcaactacaactgaaggatctgaaatggagggtgtccaatcacaacctgtggtaccatttgttggtatggagttcttttcagacaaagaggcacgcgtgtactacaatagtaaggagcagaatgcaaaatcaagtattggaagcagatccaggaagtgcaacagcatacggaaaactgattgtaaggcgagaatggtggtcgttaaaagggctgaaaagtgggtggtgacaatagtagacttagatcacaatcatcctcctttgagccccaattctctaaggttcctagaatcacaccgtaacgtgtcggatgaagactatgagctaatagaattactgcacaacaacaacatccccactagaagaatcatgtctgtcctgtctgatttgtatggtaccatgcgtaacataccattcacaaagaaagatgttagcaatctgaggacatcgatgagaaaacggactactgcaaacggagacatggctgaaaccatcaagtacttccaggaattgcaagcagaagatccatcgtttttctatagcatggaactggactcggataatacggttggtagcttattttgggtggatggtgcctcaaaagaagcatacaagaaatttggtgattgtatcgtcttcgacacaacatactgcacaaataagtataacctcccatttgctccgataatcggggtaagcaaccatggccagactgtcctatttgggtgtgtattcctgaaaaatgaaaagattgaaacttttgaatgggtgtttgaaacattcttgaaagcaatggatggaaaagagccacaatgcatcatgactgatcaggacaaaacaatggagattgcaattgcaaaagtgctgccaagaactattcataggcgctgtatgtggcatgtgcataggaatgctagtactaaccttggtgtgctgttaaacggcaaggaagggtttgaaacagacttgaagtcatgcattgataattctttgaacgaagaagaatttgatgcaagttgggatgcaatgattgatagacatgagttgtgtgggaacaagtatatgcaacacctctatgataacaggaaaaagtgggtcccctgttttttcatggattacttcttcccattcatgagcacctcccaaaggagtgagagcatgaacaaattattcaaagattttgtccacccagctgatttaatcaggaatttcatcttccaatatgagaaacttgcccaatcttgtcttgacagggatgacaatcagcggtttataacagtccaaacagacccaaaaatgtggtctggctatccaatggaagaacaagactcaaagttctatacacgtgcaatgtttgaggagtttcaagaaatgctatacagagctaccaaatacaaaacaataaatgggccggaacctggatcatattttgtgcagctaattttggatgatgacaacaagaaattcttgaaaaatatatgtgtgatcgctggacactaa</cdnaseq>

Protein Sequence

<aaseq>MSRLQVWVRDAEVLRTALLEAGIVTGPTSILQVDAGDGFEIEPV NRTGGSEMEAETSVNEQATSVGEKDIDAEVLRAALLKAGIVAGPTSILQVDAGDGLEI EPATTTEGSEMEGVQSQPVVPFVGMEFFSDKEARVYYNSKEQNAKSSIGSRSRKCNSI RKTDCKARMVVVKRAEKWVVTIVDLDHNHPPLSPNSLRFLESHRNVSDEDYELIELLH NNNIPTRRIMSVLSDLYGTMRNIPFTKKDVSNLRTSMRKRTTANGDMAETIKYFQELQ AEDPSFFYSMELDSDNTVGSLFWVDGASKEAYKKFGDCIVFDTTYCTNKYNLPFAPII GVSNHGQTVLFGCVFLKNEKIETFEWVFETFLKAMDGKEPQCIMTDQDKTMEIAIAKV LPRTIHRRCMWHVHRNASTNLGVLLNGKEGFETDLKSCIDNSLNEEEFDASWDAMIDR HELCGNKYMQHLYDNRKKWVPCFFMDYFFPFMSTSQRSESMNKLFKDFVHPADLIRNF IFQYEKLAQSCLDRDDNQRFITVQTDPKMWSGYPMEEQDSKFYTRAMFEEFQEMLYRA TKYKTINGPEPGSYFVQLILDDDNKKFLKNICVIAGH</aaseq>

Gene Sequence

<dnaseqindica>1..422#531..1890#2012..2041#atgagcaggctacaagtgtgggtgagagatgctgaagttctgaggacagcactgcttgaagctggaatagtcacaggacccacaagtattttgcaagttgatgctggggatggatttgaaatagaaccagtaaatcgaactggaggatctgaaatggaggctgaaacaagtgtgaatgagcaggctacaagtgtgggtgagaaggatatagatgctgaagttctgagggcagcactgcttaaagctggaatagtggcaggacccacgagtattttgcaagttgatgctggggatggacttgaaatagaaccagcaactacaactgaaggatctgaaatggagggtgtccaatcacaacctgtggtaccatttgttggtatggagttcttttcagacaaagaggcacgcgtgtactacaataggtatgcaaaaaattgaggtttcggtagaaaggtttcgagttgcaaaagaagcaatgtcaccaaagattacaacagatatgagttcgcttgctattctgaacgcacaagtaaggagcagaatgcaaaatcaagtattggaagcagatccaggaagtgcaacagcatacggaaaactgattgtaaggcgagaatggtggtcgttaaaagggctgaaaagtgggtggtgacaatagtagacttagatcacaatcatcctcctttgagccccaattctctaaggttcctagaatcacaccgtaacgtgtcggatgaagactatgagctaatagaattactgcacaacaacaacatccccactagaagaatcatgtctgtcctgtctgatttgtatggtaccatgcgtaacataccattcacaaagaaagatgttagcaatctgaggacatcgatgagaaaacggactactgcaaacggagacatggctgaaaccatcaagtacttccaggaattgcaagcagaagatccatcgtttttctatagcatggaactggactcggataatacggttggtagcttattttgggtggatggtgcctcaaaagaagcatacaagaaatttggtgattgtatcgtcttcgacacaacatactgcacaaataagtataacctcccatttgctccgataatcggggtaagcaaccatggccagactgtcctatttgggtgtgtattcctgaaaaatgaaaagattgaaacttttgaatgggtgtttgaaacattcttgaaagcaatggatggaaaagagccacaatgcatcatgactgatcaggacaaaacaatggagattgcaattgcaaaagtgctgccaagaactattcataggcgctgtatgtggcatgtgcataggaatgctagtactaaccttggtgtgctgttaaacggcaaggaagggtttgaaacagacttgaagtcatgcattgataattctttgaacgaagaagaatttgatgcaagttgggatgcaatgattgatagacatgagttgtgtgggaacaagtatatgcaacacctctatgataacaggaaaaagtgggtcccctgttttttcatggattacttcttcccattcatgagcacctcccaaaggagtgagagcatgaacaaattattcaaagattttgtccacccagctgatttaatcaggaatttcatcttccaatatgagaaacttgcccaatcttgtcttgacagggatgacaatcagcggtttataacagtccaaacagacccaaaaatgtggtctggctatccaatggaagaacaagactcaaagttctatacacgtgcaatgtttgaggagtttcaagaaatgctatacagagctaccaaatacaaaacaataaatgggccggaacctggatcatattttgtgcagctaattttggatgatgacaacaagaaattcttggttcattatgacataaacaatgaaatctacagttgtgcctgcaaaaaatttcaaagggataagatactgtgtggacatgttttaaaagtgatgacacaattgaatgtgtatgtggcaccagaaaaatatatgtgtgatcgctggacactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0461700, RefSeq:Os07g0461700