Os09g0462700

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0462700| Description = Similar to RNA Binding Protein 47| Version = NM_001069938.1 GI:115479618 GeneID:4347299| Length = 4234 bp| Definiti...")
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Gene Name

Os09g0462700

Description

Similar to RNA Binding Protein 47

Version

NM_001069938.1 GI:115479618 GeneID:4347299

Length

4234 bp

Definition

Oryza sativa Japonica Group Os09g0462700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18152516..18156749

Sequence Coding Region

18152517..18152835,18152927..18153027,18154336..18154789,18155729..18155787,18155869..18155999
,18156099..18156195,18156298..18156462

Expression

GEO Profiles:Os09g0462700

Genome Context

<gbrowseImage1> name=NC_008402:18152516..18156749 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18152516..18156749 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcttccctcctctcgcctccaaatcctctcttcctcttcacacacaggcgttgccgcagagacagcgagcgagcgagagagcgcgaggcggaggtgagtgacgaccatgcaggcggtggtggcgaacggcggcggcggggacgtggtgcagaagccgcagcaggtggtggcggcgccgccgccgccccaggcggcgctgccgccgccgcctcattgggtggccatgccgttcgcgcccccgggggcggcggccatggtaatgcagcaccagatggcgccggcgccgccccagttcgccccgcacttcgtgccgttccacgcggcggcgggcaggaggagaacaagaccatctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggctacaccggcgaggttgtagcaataaaggttattcgtaataagcaaactggacaatcggagggttatggatttgtagagttctacagtcatgctgctgctgagaaagtacttgaaggatttgctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcatttagcatgggggacagacgttcagatattgcttcagatcattccatatttgtaggcgaccttgcttctgatgtcaatgataccacattactagagactttctccaaaaggtactcctctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggttttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtgtattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggtacttctggacctactggttcagctgctcgatcagatggagatttgacaaacacaactgtatttgtcggtgggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaaatttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagtttgttcagaggaagaatgcggaagatgcattgcaaggactgaacggaagcaccattgggaaacagaccgtgcgtctttcgtggggacgcaatccagcaaacaagcagttgaggagtgacaatggcagtcagtggaacaacgggatgtactacgcagcctcgccgttttacagtggatacggctaccctgcaccgttccctgctgatccgggcatgtacgctgctgcttatggcgcctacccgttctacggaaaccaacaacaagtgagctaa</cdnaseq>

Protein Sequence

<aaseq>SSLLSPPNPLFLFTHRRCRRDSERAREREAEVSDDHAGGGGERR RRGRGAEAAAGGGGAAAAPGGAAAAASLGGHAVRAPGGGGHGNAAPDGAGAAPVRPAL RAVPRGGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGF VEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASD VNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCS TRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYG EISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDN GSQWNNGMYYAASPFYSGYGYPAPFPADPGMYAAAYGAYPFYGNQQQVS</aaseq>

Gene Sequence

<dnaseqindica>2..320#412..512#1821..2274#3214..3272#3354..3484#3584..3680#3783..3947#ctcttccctcctctcgcctccaaatcctctcttcctcttcacacacaggcgttgccgcagagacagcgagcgagcgagagagcgcgaggcggaggtgagtgacgaccatgcaggcggtggtggcgaacggcggcggcggggacgtggtgcagaagccgcagcaggtggtggcggcgccgccgccgccccaggcggcgctgccgccgccgcctcattgggtggccatgccgttcgcgcccccgggggcggcggccatggtaatgcagcaccagatggcgccggcgccgccccagttcgccccgcacttcgtgccgttccacgcggtcggcccgccgccgccgccgcagccgcgggcggcgccgccgcccgtggccgtggcgatgggctccccggcgccgcacgcgcagggcggcggcggcgggcaggaggagaacaagaccatctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggctacaccggcgaggtgagtgagattgagagcacgccacgccttttacccaaaaaaagtacagatcttggccacggccttgccatccccaacccaaacctacgaaaaaaatcgtttcttttcgtcacctgactcatctttcctcgtcttgatgtgacaagccagtggaacgaatgtgtacgtgcttatccatctctacattaactaaaaaaatgtcattttgatgtgctgctaagtttcctttccaaaatgtgatccatttcttgggttgcgcgaggtaggagagagagagagagggggggggggggggggatcttaaaaacaagctaggtgcggtgcagtgagagcagcagagatgggtacaaatgattgggtcacagtgctgaaaaagggaaatggcttagcagtttgtagcaaccgctgggcaaacggaaggcatggatctgcgagctggaactgggacttgcagtgcagtggcctcgtttcgtttcatcagattggctgcgccgatatgcccgtccttccttcctgtactggcgatgggaaatgttcgtttgttcgtatgttcggcctgatgtgccaggttggtgggtagcgtcatccttggtgtgtacggtgtaccattgccgtccatctgttgcatctctcattggtcgactaattttaggcttgtgctgtgtttaggagatggacggtttgaaggtttcttgtttctttttctttcatataatgatatagggaatgttttctttacgtacgcggatactaaggagctgatggccacataaatagttccacaacttttggtgaaccggtgtttatataaggaaggtgtaatactctttttcattatctaaaaagatgttggtggacacaaacaaaacgagaaaataatagtgataaatgatgtttccaaacaccagattgattctaattaggactttacagtttgtactgaagatgtgacctctcctttagttgttttttatggagtttctgtttgtagcggtacactagcttttcctgttcccttctatgctagtttttaggaggctgaacatacaaaaagttcgttcataaggtttcataatttgctacattcattgtattcaatgacaatatggagcatcatgctcctcttagtatattgaagaaattaaaagtcttatgcttttatagcattttttagcatgtcaatcagttggatgagtatacaggttagtgtgcctaattaaccggaaagtgtcatttgatgcaattctacgccttctgttcttattttgacattgcaagttcaagctcataggtttgaatatgtttcaggttgtagcaataaaggttattcgtaataagcaaactggacaatcggagggttatggatttgtagagttctacagtcatgctgctgctgagaaagtacttgaaggatttgctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcatttagcatgggggacagacgttcagatattgcttcagatcattccatatttgtaggcgaccttgcttctgatgtcaatgataccacattactagagactttctccaaaaggtactcctctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggttttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtgtattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggttcaatcacaagtatctaattcagttcttttttggggtcaacactagtacattcataccaagcattatttgtttaatagatccttaatttcaacgctagtacccctaaatttgcgagtctttctgtccattaatgtagtatagcagaagatagtatggactctctttttttttttgaagatatggactctataaatttgctgtcatgtactatggtttcctgtcactgttcactctctaattttgttagcattttccccttccttttaaatttctcttgtactctttttcaaaaagaaaaatgtatatttatttaattattttcattcagactttagttgtattatcttgaattgttcatcaatcttgcagcatcccatattttacttttgctcatatctccctaattttttttaggaatatagtatccttctccatgcttctgagtacatcatttgagttagtaattgatggtctttggtgtttgatgtcattattgtgtatatcatttttgcaatcttccggtttcatctataaggtcctacaatgcctttccaacaaaatgctactttccctgcattttcccttcagaagaacaatgaacaacacaattttagtcttttcacaccttggaaatatttttatattattttacctaattgtaattttggatgaacatcggacatgcttgatatctgttaattgtcgcagatattttcagatttaacctcgtgctcgattcatatattattctttttagaatacagggattggttttgaaaatctgagataatttaatataccaaacctgagaatgatagtgcattattgccttatagagtgaacagtggatgggataaaacttgctttgacaatcttatacaggtgttcctattaagacacttaattcctattttctaactatgtttctcggtataggtacttctggacctactggttcagctgctcgatcagatggagatttgacaaacacaactgtgagtacagatgtatttacccataaagtcttatgtgtatacgaatttttccttctataaccgtccagtaacttattgtaggtatttgtcggtgggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaaatttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagtttgttcagaggtaatttcaacccatatttgttttctaagggtaaatttcctctgttcctgtcccattgacaagatctgattaacattgtcaatgtgttcctttttccaggaagaatgcggaagatgcattgcaaggactgaacggaagcaccattgggaaacagaccgtgcgtctttcgtggggacgcaatccagcaaacaagcaggtacaatcttcccccttgctacatttccaccagaggaactgtaaaattgtgcagtaaacataggcaaaaggacctgagactccatttcttgaccatgtacagttgaggagtgacaatggcagtcagtggaacaacgggatgtactacgcagcctcgccgttttacagtggatacggctaccctgcaccgttccctgctgatccgggcatgtacgctgctgcttatggcgcctacccgttctacggaaaccaacaacaagtgagctaagaggtcacttgtgcttcacctcaaactggagctaggcacgcaagcattagcagtagctcttgctagaagaaaaaaagaacaaggtagacgacggtttcctaggtcagctagatgcagtcactggttatgtaaagtacattactacacgaactagctagcgccactaagccgccctattgactggccatggtctgctgaactcttcttccagaaaagaagttttgacctggagctgcaccttattgaagtagaacaataaactattcaaatacctactgtgcgctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0462700, RefSeq:Os09g0462700