Os07g0462200

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0462200| Description = Protein of unknown function DUF1218 family protein| Version = NM_001066115.1 GI:115471962 GeneID:4343166| Length = 3...")
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Gene Name

Os07g0462200

Description

Protein of unknown function DUF1218 family protein

Version

NM_001066115.1 GI:115471962 GeneID:4343166

Length

3971 bp

Definition

Oryza sativa Japonica Group Os07g0462200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16886855..16890825

Sequence Coding Region

16887089..16887350,16890313..16890516,16890618..16890709

Expression

GEO Profiles:Os07g0462200

Genome Context

<gbrowseImage1> name=NC_008400:16886855..16890825 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16886855..16890825 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccatcatcgtgctcgcctccgtcctcctcctcgacgtcatcgccttcggcctcgccgtcgccgccgagcagcgccgcagcaaggcgacggtgacgcccgactcggagaagctgtacgactactgcgtctacgactccgacatcgccaccggctacggcgtcggcgcgctcctcctcctcgccgccgcgcaggccgtcgtcatgctcgccagcaagtgtttctgctgcggccgcggcctcaagcccggcggatcccgcgcctgcgccctcatcctcttcctcttcgcatggttgaccttcctcattgctgaggcatgcttgatggccggatccatccggaatgcgtaccacacccggtacagggggatgttcgttggcgagtccgtctcctgcgagactgtgcgcaaaggtgtctttgctgctggtgcggccttcaccttcttcacagccatcctcagcgaattctactacgttagctactccaagtcccgcgatgctgctgggggtgccccgtacggtggctccaacattggcatgggcacttacagctaa</cdnaseq>

Protein Sequence

<aaseq>MASIIVLASVLLLDVIAFGLAVAAEQRRSKATVTPDSEKLYDYC VYDSDIATGYGVGALLLLAAAQAVVMLASKCFCCGRGLKPGGSRACALILFLFAWLTF LIAEACLMAGSIRNAYHTRYRGMFVGESVSCETVRKGVFAAGAAFTFFTAILSEFYYV SYSKSRDAAGGAPYGGSNIGMGTYS</aaseq>

Gene Sequence

<dnaseqindica>3476..3737#310..513#117..208#acgctcaccagccgcagcggcgcgcccctctctctctcctctccttttaactactactccccacgaggagcagccgcgaacaccacacaccacctcacgcagcagcagcggcagcaatggcgtccatcatcgtgctcgcctccgtcctcctcctcgacgtcatcgccttcggcctcgccgtcgccgccgagcagcgccgcagcaaggcaagccccccccccccctcccactcacccccttcctttctcctaccggcctctggaggagccgtctgctgacgtacgtacgggggttgctttttttgcaggcgacggtgacgcccgactcggagaagctgtacgactactgcgtctacgactccgacatcgccaccggctacggcgtcggcgcgctcctcctcctcgccgccgcgcaggccgtcgtcatgctcgccagcaagtgtttctgctgcggccgcggcctcaagcccggcggatcccgcgcctgcgccctcatcctcttcctcttcgcatggtaaatcaccatcactccgcttgctactactcgatcgaatgcttcaccacattaaccaaacaacattacgaatgctttgcctcttttttctttctactcatattttgggatctcgcgcctcttcgttgcttgcttctggatctgggttgctggtagtttaatctccgcggtaatttttagctagatctaccacttgtggtttgagcacagaacgcgcagcttcagttcagatccggttgttggtgggcaattaatggaggatgggatctagtggtttgagcagatctactgcaacaaatgcttgcacataagcatttagtgaggggaggatctagaggacaattattggatggtttatttatgctggattggctattaatttagagctcataaccattttgcttcagtggaccgggcctattgagctgttctgctcattcactacctaatcagttagtataattttagtctgaaaaaactgagcatcagttcgggcagctgttattcagaagcaaagaggttcttccttcagatctattaggtttactatctctttcatgctaaccaaaaatatattttaagcacatgactgctgcctcattccgctgattgttggtgaagggtcaaattgaattgtggcacactcaaagtggtgatttgttgtccacttataaggaaattagtactactatttttttcagctcgcacaagaggcagctttcactttatgggggcttttaactatttgccacttttagatttggcaaataactactccctccatactcataaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagttgttgagtttgaaaatataaaaattatatgaatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaaaaagaagtcaaagttgtgttttggagaccgtgtcgctgtcctaaacaacttcttttacgagtacagagggagtatttgccacccctatctcaatgacatgtgggtccacatgtgtctatgacatgtgggtccagtggcaaaaagttaattgccacatctaaatgtggcaaatggttaaatattcctcactttatggcagctcctctgtcacaaaagctaaacagttaaaactccaagagtgggggagacttgttcacttttcttaggcttgttttagttcccaactttttcttcaaacttctaactattccatcacatcaaaactttcctacacacacaaacttccaatttttccttcacatctttccaatttcaatcaaacttccaattttgacgtgaactaaagctgtgcttttgcatttcattagtctcacggaagctctatatacaattgaacaattcttttctgggattttaaggtagtacctcccattcaagaatttatcctttcaaagttgcaatagtttacttgaataagtggtagatctactggacttctacatgagtggcctgcatatgtttaattgctactcctacattagtggctgcatatgtccaactgctacatgagtcactgcatatgtccaactgcctcaaatttacttgccccacaaagcgcaaagtgcttgtcactggttgctttgtactactactaggtacttcctccgtttcacaatgtaagactttctagcattgctcacattcatatagatgttaatgaatctaaacactatatatgtctagattcattaatatctatatgaatctaggtaatgctagaaagtcttacattatgaaatgggggagtaggatttaacagttgaactagtgttcctacagtaggtgcacacttgaactaaatattttttattttttaatttaacattacgcagacgttgataacaactattttgggtgtgttcggaatccccctttcccaactcacccctctctttttccgcacgcacgcttttcaaactgctaaacggtgtgtttttttttaaaaaaaaagtttctatacgaaagttgcttaaaaaaatcatattgatccatttttgaaaaaaaaagctaatagttaattaatcacgtgctaatggactgctgcgttttccgtgcggagagtttagttccaaactcccccctccagcgaacacagcctgtcttgttccgtgggtggtacctgtgttattaattagctcattgactttaaataaagtaatgagaccatgttacctggcctgacacagctcactatactagttttgtgggatcatagggagtagtatttaatagtagccatgcacttgtgattatctttttacaaattataattgatttgtgttgtttctttaatgaattgttaaattaattaacttggttatatggtcttccttgaaatcaacaattgggatatcccaaaaaagttctgaagtcaacatcaattgaaagcttgctttcttggtgtccttggctagccaaaccttcatgtagtgtacacctgtcatagtctacagccaaatgtcatcaaatctaattcccttcatcttcctgctctgacgatgcttgttgtgtccatcactacatatacttaatccagaactgcatatccatcatattctaggtgttccaatatgaacagatgtttcaacacctatggtttaaagatatactgatatgcaactgtgcatccgttcaacagtttttgttatgttcccttttcccggtgcttcttcatgttctaatctattggtttttgattgaccaaagtacatagggtaaatggtttagctttgtttctcatttctgcatttatttgaatttaactactactgcctgaatctgtaatatggaaaaattagggtatacgccaattaataagtcaaatcaaatgtacttgccataaaatgattactcaataagatgttttctgatcgttggcaggttgaccttcctcattgctgaggcatgcttgatggccggatccatccggaatgcgtaccacacccggtacagggggatgttcgttggcgagtccgtctcctgcgagactgtgcgcaaaggtgtctttgctgctggtgcggccttcaccttcttcacagccatcctcagcgaattctactacgttagctactccaagtcccgcgatgctgctgggggtgccccgtacggtggctccaacattggcatgggcacttacagctaaaaggagcttgctgaacaggatgatccggtccttgagcttgttggattcaaggtggagcatgtgatcgtggagtgcattgttcttgttaacacattaccttagttacggtgtaattggttggggtttactatcccgttaggttgtatgagattacttggttgggttgtacactattcggattattggattggattctgaacatggaatacacgtatcctagtatgatgatgcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0462200, RefSeq:Os07g0462200