BGIOSGA010410

From RiceWiki
Revision as of 15:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA010410

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010410, complete gene.

LocusTag

OS03G0569000

Ensembl Transcript ID

BGIOSGA010410-TA

Ensembl Protein ID

BGIOSGA010410-PA

Length

5163

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23124501..23129663

Sequence Coding Region

23129488..23129663,23128438..23128707,23127215..23127334,23124501..23127114

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23124501..23129663 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23124501..23129663 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCCGGACAGACTGCCATTTGGACTTGGTTTTGATAGAGTACAAGCATCAGGGGGATATAGATGCTCTGAGCAGTATGAATGGCAACGTTTGGCCCTTCGTCAAAGAGAAGCAGCAAGGGAGAAACCCCACTGTGGTGCAACCCTGAATTACCCTTTGCTTTCACATCGCAGAGACAGGATAGAAGATTCTGTTGCTGCTACAGAAATTCCACATCAGTTTAGAGGACATGATTTGCTGCATAGTCATGGCAAAACTTTGAATGATAGAAGTTGTAGCCATTCTTTTAGGGAGGAAGAAACTAAGGATCTTGTGTCCTCCTCACATGATGATGCTGAAACTGAGAAGAATTTTGCTATATGGGACCAACCTCTTGATCGAACTGGACTCCTGGAGTCAAAGCGACACAGGCGCAGCTCCTCCCCTAGATATTGTATGAAGAGTTATCCCTTTGGAAATAAGATTGATGGATATCATGGTGAAGGTCGTGCTTGTCCTCGCGATTCATCAAAATGGGGCAACCATAGTCTTTCTCCTGATCATGCTCCGACAAGTTGTCTAAGGACTGAGGGAGAAGTTCCTTCCCTCAATCGTGTGTCTGAGTATGCAAAAGGTGCAGATGGACATATGTGTACAACAGAAAGACTTGGGGACTTCTTTTCATCTAATCAGGGGAGTTGCACACAAAATAGAAGTTATCAAGAAGTTCAACGTCTGCCAACTGAAGTTAACTTCCCAAATGCCCATTTCTCAGCGATAGATAAAGCAAGGCATCGATCTTACATGGAAAAGTTCCAGACTTGCAAGAAGCATCAGGGCACCTGTTCAAAAGATTTGATGTTTAATATTTCTGATCACTCCTTGGTTGGTCGAACATGTCATAGGTTTGAAGTAGGGAGAGCTCACACCAGTAAGGCATTTGATGAATTTCATGCATTCCATCATGAGCAACTTCACCAATCTCCACGTGATAATTTTAGGGACCAATTGGGTAGCAGTCGAAATTTCAGGAATGTTCATAAAGGAAAGATGTCAAGAAGGCAATGCACAAAACATGATCTCAAGAAAAAGAATTCCAATGTTGCTTTTCATAGTACGTATGGGAGAAACAGTGACCGGAAAAGGCATGGCAATCATCTGGATGGACATAGAGCTAAGAGGAATATGCCGTCTGAAAATCAGTCTAAAGAATCCTGCTATCCGAACATGAAGGATTGGCAATCATATTCTCATGGTGATGTACGCCAGAGTGGTGATAATCAGGAGGGAAATACCAAAAAAATCAAGAAAGGAGGTCAAAATGGAGAAAAAGGGAACTATCATCGAAACAACAATATTCCAACTGTTGTATGTAGTGGCTCAAAGTCTAATGAGAATTCAGGTTTGTTAAGTCCTAAGTGTAGAAGTAAAACCATTATGTCATCAAATGGACCAAAACAAAGTGAAGGAAGTGAGAACATTAAGTTAGAGTCTGATAAGAAGCCTAGTTTGGTTGTTTGCACAAAAAAAACAGAAGACATGAAGAGTGATGAGGTTTCGAATGGTAAACTACAAGATGCTCCAGTCACCTATGTGGAGAATGGTGTGAAAGAATCAGATAATGCTTCTCCGTCTGAACTACTTCGTGATTGTTTGATTATATGGAGAAGATTGAAGAAAGATAATTGTGCTGAAGCTGAAAATGTAAAAAAAACCAATACAAATCGGACAGTGCAAACAAGCAAGGTATCTGTGAGCGAAAGATTGAGAAATGGAAGACCTAGCTCAGGATTTGATGATGAAAACAGCAGCACATCAGGGAGTGCTTCTGTTAGCTCAGAAAGCGATGATGAAAGTAATAGTCCATCTGAGGACTCCAAACAATGTAGAGGTGTAATGTCATCCAGTGAAGCACAAAAGTGTAGCAAAGGAAGAACTGAGAGAGAGTCAGAGCAACCCTTCAAATCCCTTAGTGGCGACAATCGCATGAAAAGCCCACAAAATACAATAGCTGAGAAAGGACTAATGTTTTATCAGGATGTTCCACCAGAAACAAATCCTAGTGAAGTTATGCAGCAGAAAGAACAAGATGACCTTTCATGTTGTTGGAATGGCTGTTCTGATACTAGCACGAAACCAGTTGCTGATTCTCATCCGGAAAGTAGTGTGCATCAGAAGTTTTCTCAGCAGGGAGCAATTGAAGGTCATTCCAACGCAAGGAGCAGACATGAATTGGTTGTTGGCTGTGACATTGAAAATACACTGGAAGCTGATGGTGCCAAATCAGGTGAGCAATCAACTGTTCCGGAATTGCTGGACAAAAAAGCTGCTGTTCTTTGCTCAATGGATGATGATAGTGTGAAGGTAGTAAATGTGTCAGCGTGTTCAAATCAGGACAGTGACACTACTCCGTGCGGTGTGACAAAATTGGATAAAGGAACTGCAAACAAGTTCCTAGAGAAGCCTGTCAATCTTTCCACAGGAAGTAACTTTAGAGTCATCCAATGGGGCGCCGTGGATTGCAACATTGTGAGAATCAAACAAGAGAATTCACAACATGCAGACTCTGAACAGGATACACATCATAAAGAGAGTGGGGAACCATCACAAGCTCTCAAAGTGGCATCAAACCAACAAATACCCCATCAGTTTGATTCTGACAGAGATAATCCTTGTACTACTAGACAAGCTGATTGGGATTCATGTTCCTCGATACCAGACTTAAATTGCTTGCCTAATATGAATACAGATGATGAGCTAGAGCCAGTTGAGAATGTGACTTTTCAGGTAAATGGGGATGGTACAAATCCCCAGAATAATATCAAGAGTCTTTCAGCTTCCTCTTGTAAGCCCACTCTGCAGAAAGAACAGTCTAAGCGACCTGAGCCAATTGAACTTACTGGAGGAATTTGCGAAAGGAAAGATGGAAATAGGTTCCAGTCACCTAATTCACATAGTGGACCATCTCAGCAAAGCATAGTTGAAGAAAGTAGCATGTCCATTGATGTATTCAAGTGTAACCTCTGTGAATTCATAAAAAATATCATAAAGCCATTGTGGGAAGATGGGCTGTTATCCCGGGAAGTCCACAAAATTATAGTGAGGAAGGCTGTGGAAAAAGTGACCACCGTGTTGGGCTCAAAGGTCCCTCTGACAGAGATAGATGCTGTAGATTTTGTAGAAGAATCTCAGAATTAA</cdnaseq>

Protein Sequence

<aaseq>MGPDRLPFGLGFDRVQASGGYRCSEQYEWQRLALRQREAAREKPHCGATLNYPLLSHRRDRIEDSVAATEIPHQFRGHDLLHSHGKTLNDRSCSHSFREEETKDLVSSSHDDAETEKNFAIWDQPLDRTGLLESKRHRRSSSPRYCMKSYPFGNKIDGYHGEGRACPRDSSKWGNHSLSPDHAPTSCLRTEGEVPSLNRVSEYAKGADGHMCTTERLGDFFSSNQGSCTQNRSYQEVQRLPTEVNFPNAHFSAIDKARHRSYMEKFQTCKKHQGTCSKDLMFNISDHSLVGRTCHRFEVGRAHTSKAFDEFHAFHHEQLHQSPRDNFRDQLGSSRNFRNVHKGKMSRRQCTKHDLKKKNSNVAFHSTYGRNSDRKRHGNHLDGHRAKRNMPSENQSKESCYPNMKDWQSYSHGDVRQSGDNQEGNTKKIKKGGQNGEKGNYHRNNNIPTVVCSGSKSNENSGLLSPKCRSKTIMSSNGPKQSEGSENIKLESDKKPSLVVCTKKTEDMKSDEVSNGKLQDAPVTYVENGVKESDNASPSELLRDCLIIWRRLKKDNCAEAENVKKTNTNRTVQTSKVSVSERLRNGRPSSGFDDENSSTSGSASVSSESDDESNSPSEDSKQCRGVMSSSEAQKCSKGRTERESEQPFKSLSGDNRMKSPQNTIAEKGLMFYQDVPPETNPSEVMQQKEQDDLSCCWNGCSDTSTKPVADSHPESSVHQKFSQQGAIEGHSNARSRHELVVGCDIENTLEADGAKSGEQSTVPELLDKKAAVLCSMDDDSVKVVNVSACSNQDSDTTPCGVTKLDKGTANKFLEKPVNLSTGSNFRVIQWGAVDCNIVRIKQENSQHADSEQDTHHKESGEPSQALKVASNQQIPHQFDSDRDNPCTTRQADWDSCSSIPDLNCLPNMNTDDELEPVENVTFQVNGDGTNPQNNIKSLSASSCKPTLQKEQSKRPEPIELTGGICERKDGNRFQSPNSHSGPSQQSIVEESSMSIDVFKCNLCEFIKNIIKPLWEDGLLSREVHKIIVRKAVEKVTTVLGSKVPLTEIDAVDFVEESQN</aaseq>

Gene Sequence

<dnaseqindica>1..176#957..1226#2330..2449#2550..5163#ATGGGTCCGGACAGACTGCCATTTGGACTTGGTTTTGATAGAGTACAAGCATCAGGGGGATATAGATGCTCTGAGCAGTATGAATGGCAACGTTTGGCCCTTCGTCAAAGAGAAGCAGCAAGGGAGAAACCCCACTGTGGTGCAACCCTGAATTACCCTTTGCTTTCACATCGCAGGTTAGCATCATTTGCATCAATTTATGGAGAAAATTGCATATCTACCATCGCATAAGATTGGATTCGCTGGAATACCATCACTTAAATTGGCTTCGCTAGAATACCATTCTCAATCAAGACATTCGCCAAAATACCATCATGGACGGAAATACCCTTGGCCCTTCTTCCTCCCTCCAATGCTAGAAGAGCTTGCCGGTGGCCCGTCTTCATCTTCCATCCTGGCCGCCACGCCAGGGCTCGGGGAGGACGCAGCGGTGTGGAAGTTGTAGGAGATCCACGCGCGCGGGGGAGCTGGAGGAGGCCATCGTCGCCGTTCCCTCGTTGCGTCGGAGTTGAAGGAGCCCACCACCGGCCGCTCCTCATCTTGCCCATTGGCTGCCGCGCACTTTGCCACTGCTGCTGTTCCCTCATTGCGTTGGATTTGAAGGATGCCGGGGGCATCATGTGCGGATTTGGAGATGGCTAGCCATCGTGACAAGGCTCGAGGGTGCTGGCGCAGTGGCCGGGATGGAAGGCGGAAACGACGGGAGGGCTGCCGGCAAGCTCTTCCAGCATTGGAGGGAGGAAGAATAAGGGCCAAGGCTATTTCTGTCCAGGATGGTATTTTGGCAAATATGCCCTGGTTGAGAATGATATTCTAGTGAAGCCAATTTAAGTGATGGTATTCTAGCGAATCCAATCTTATGTGATGGTACATATGCAATTTTCTCCAATTTATGGTCGTCATGTTGTTAGTTTCTCTATCCAGTAGTAGTTTCACTAATGCAATTTATGATGCAGAGACAGGATAGAAGATTCTGTTGCTGCTACAGAAATTCCACATCAGTTTAGAGGACATGATTTGCTGCATAGTCATGGCAAAACTTTGAATGATAGAAGTTGTAGCCATTCTTTTAGGGAGGAAGAAACTAAGGATCTTGTGTCCTCCTCACATGATGATGCTGAAACTGAGAAGAATTTTGCTATATGGGACCAACCTCTTGATCGAACTGGACTCCTGGAGTCAAAGCGACACAGGCGCAGCTCCTCCCCTAGATATTGTATGAAGAGGTGTGTATATGTTACCAAACTATTGACATTCATAAATTTGGTTAATCCTGTAGGAATAAGTCTTGGCTGGTTGGTCTTGGTCTTGTGGTGCCTTTTCCTGCTTTTCAGCTTTCTAGGACAGCATCTCTACTTTCAGTTTGAATGCTCTAGGACAGTTAGGACAGCAGTTTGTTGAGATGCTCTAGGACAGTTTGTTGGGATGCTCTGCTCTAGGACAGTTTGTTGGGATGCTCTAGGACAGCACCCTCTTAGACTAGCATGGCTGCATGGCTGCTACAAGCAGCTATAAATATGTATCCAATCCTCTTTGGGAGGACATGGCTTTTGTGTTTAGTGAATGAAGAAAAACCAGAAAATTGCCCCATCTCGAGTGCCATCCTCTTCTCAATGAGAGTAACCATTGAAATTCTAACAAATCCTGCCATATTTTTTGTTGAGTCGATAAAATTATAGCAAAAAATATAGATTTAAGAGAGATGATCGTATTTAGGAATTAGAATATCCATCCCTACCACTTTGAAGTATGACCTGACAAGAGGGCTCAACTTGTAGCCTCACAAAGCATCACGCAGCATGTTTCACCAATGGAAGCAAAACATGAGTTGCATACGTTGCCACTTACTGTCCAAGCGACTGACTATCTCCTGCCAAGGTGCTACCACTGGCTAGATTGCCCCGTGACATGCAAGCCATTTTCTAGGGTCATGACTGTAACTGTTATTGATCTTGCCACTGCAAGCCTGCTTTGAAGAAAGACTTTTGGAGCTTTGTTCTTTTCTGCTTCCATTTGTGTAAAGACATGAGGCTGCAGGTGGGGCCCTCTTGTTATGTTATCACTGCTAGCGATGGAGATTGTAAAGTCTAAAATTTGTAGTTTTGCGGTAGAGAAGTACTCTAGTTTTGCAATATAGTTTCTCTAAATCTAGTTTTGCCATAATTATATGTGATTTTGTGAAATTTACTCTTTTATTTCCCACTTTGATGTTCTCGCATGTTGTATTGGTCAATATTCTGCATTTTATGATCTGTGCATTCCTTAAAGATTTCCTTCCTAACAAAATAAATATGTGCACCATGTTATGATCTATCTTCTGTTATTACAGTTATCCCTTTGGAAATAAGATTGATGGATATCATGGTGAAGGTCGTGCTTGTCCTCGCGATTCATCAAAATGGGGCAACCATAGTCTTTCTCCTGATCATGCTCCGACAAGTTGTCTAAGGTAATATTTTTTAGGTGCAGATCTAGATTTTTCGGTGGCAGCATGCACCTGTTTATGTGTATTACTATTATCTGATTCAATTGTTTGTTCCTTAATCTAGGACTGAGGGAGAAGTTCCTTCCCTCAATCGTGTGTCTGAGTATGCAAAAGGTGCAGATGGACATATGTGTACAACAGAAAGACTTGGGGACTTCTTTTCATCTAATCAGGGGAGTTGCACACAAAATAGAAGTTATCAAGAAGTTCAACGTCTGCCAACTGAAGTTAACTTCCCAAATGCCCATTTCTCAGCGATAGATAAAGCAAGGCATCGATCTTACATGGAAAAGTTCCAGACTTGCAAGAAGCATCAGGGCACCTGTTCAAAAGATTTGATGTTTAATATTTCTGATCACTCCTTGGTTGGTCGAACATGTCATAGGTTTGAAGTAGGGAGAGCTCACACCAGTAAGGCATTTGATGAATTTCATGCATTCCATCATGAGCAACTTCACCAATCTCCACGTGATAATTTTAGGGACCAATTGGGTAGCAGTCGAAATTTCAGGAATGTTCATAAAGGAAAGATGTCAAGAAGGCAATGCACAAAACATGATCTCAAGAAAAAGAATTCCAATGTTGCTTTTCATAGTACGTATGGGAGAAACAGTGACCGGAAAAGGCATGGCAATCATCTGGATGGACATAGAGCTAAGAGGAATATGCCGTCTGAAAATCAGTCTAAAGAATCCTGCTATCCGAACATGAAGGATTGGCAATCATATTCTCATGGTGATGTACGCCAGAGTGGTGATAATCAGGAGGGAAATACCAAAAAAATCAAGAAAGGAGGTCAAAATGGAGAAAAAGGGAACTATCATCGAAACAACAATATTCCAACTGTTGTATGTAGTGGCTCAAAGTCTAATGAGAATTCAGGTTTGTTAAGTCCTAAGTGTAGAAGTAAAACCATTATGTCATCAAATGGACCAAAACAAAGTGAAGGAAGTGAGAACATTAAGTTAGAGTCTGATAAGAAGCCTAGTTTGGTTGTTTGCACAAAAAAAACAGAAGACATGAAGAGTGATGAGGTTTCGAATGGTAAACTACAAGATGCTCCAGTCACCTATGTGGAGAATGGTGTGAAAGAATCAGATAATGCTTCTCCGTCTGAACTACTTCGTGATTGTTTGATTATATGGAGAAGATTGAAGAAAGATAATTGTGCTGAAGCTGAAAATGTAAAAAAAACCAATACAAATCGGACAGTGCAAACAAGCAAGGTATCTGTGAGCGAAAGATTGAGAAATGGAAGACCTAGCTCAGGATTTGATGATGAAAACAGCAGCACATCAGGGAGTGCTTCTGTTAGCTCAGAAAGCGATGATGAAAGTAATAGTCCATCTGAGGACTCCAAACAATGTAGAGGTGTAATGTCATCCAGTGAAGCACAAAAGTGTAGCAAAGGAAGAACTGAGAGAGAGTCAGAGCAACCCTTCAAATCCCTTAGTGGCGACAATCGCATGAAAAGCCCACAAAATACAATAGCTGAGAAAGGACTAATGTTTTATCAGGATGTTCCACCAGAAACAAATCCTAGTGAAGTTATGCAGCAGAAAGAACAAGATGACCTTTCATGTTGTTGGAATGGCTGTTCTGATACTAGCACGAAACCAGTTGCTGATTCTCATCCGGAAAGTAGTGTGCATCAGAAGTTTTCTCAGCAGGGAGCAATTGAAGGTCATTCCAACGCAAGGAGCAGACATGAATTGGTTGTTGGCTGTGACATTGAAAATACACTGGAAGCTGATGGTGCCAAATCAGGTGAGCAATCAACTGTTCCGGAATTGCTGGACAAAAAAGCTGCTGTTCTTTGCTCAATGGATGATGATAGTGTGAAGGTAGTAAATGTGTCAGCGTGTTCAAATCAGGACAGTGACACTACTCCGTGCGGTGTGACAAAATTGGATAAAGGAACTGCAAACAAGTTCCTAGAGAAGCCTGTCAATCTTTCCACAGGAAGTAACTTTAGAGTCATCCAATGGGGCGCCGTGGATTGCAACATTGTGAGAATCAAACAAGAGAATTCACAACATGCAGACTCTGAACAGGATACACATCATAAAGAGAGTGGGGAACCATCACAAGCTCTCAAAGTGGCATCAAACCAACAAATACCCCATCAGTTTGATTCTGACAGAGATAATCCTTGTACTACTAGACAAGCTGATTGGGATTCATGTTCCTCGATACCAGACTTAAATTGCTTGCCTAATATGAATACAGATGATGAGCTAGAGCCAGTTGAGAATGTGACTTTTCAGGTAAATGGGGATGGTACAAATCCCCAGAATAATATCAAGAGTCTTTCAGCTTCCTCTTGTAAGCCCACTCTGCAGAAAGAACAGTCTAAGCGACCTGAGCCAATTGAACTTACTGGAGGAATTTGCGAAAGGAAAGATGGAAATAGGTTCCAGTCACCTAATTCACATAGTGGACCATCTCAGCAAAGCATAGTTGAAGAAAGTAGCATGTCCATTGATGTATTCAAGTGTAACCTCTGTGAATTCATAAAAAATATCATAAAGCCATTGTGGGAAGATGGGCTGTTATCCCGGGAAGTCCACAAAATTATAGTGAGGAAGGCTGTGGAAAAAGTGACCACCGTGTTGGGCTCAAAGGTCCCTCTGACAGAGATAGATGCTGTAGATTTTGTAGAAGAATCTCAGAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010410