Os07g0463600

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0463600| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001188263.1 GI:297725656 GeneID:9266155| ...")
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Gene Name

Os07g0463600

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001188263.1 GI:297725656 GeneID:9266155

Length

3705 bp

Definition

Oryza sativa Japonica Group Os07g0463600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16975290..16978994

Sequence Coding Region

16975290..16975589,16978212..16978994

Expression

GEO Profiles:Os07g0463600

Genome Context

<gbrowseImage1> name=NC_008400:16975290..16978994 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16975290..16978994 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcacgagcagctactgcaagccagcacggagctcatgaaccacagcctgggctacatcaggtccatggccctgggctgtgctgccaagctcggcgtcgccgacgccatccaccacgccggcggccgcgccaccatggacgacctgcgcgccgcgctgtccctccacccgagcaagctcccgtacttcctgcgccgcgtcatgcgcgtgctggtcgcctcgggcgtcttcgcgcatgacgaggaggaggacgacgatgatatctaccgcgtcacgcccgtgtcgtccctgctcgtcaccgccaccggcggcaacggcgggaggagcctgctgccgttcgtgctcctccagctctcgccgccgatctacgtgacgccggccacgagcatggccgagtggctcacgagcggcgaggaggagacgccgttcgagatgacgcacggcgcggggctgtggaccgtctgcagccgagacccggagctcggcgagctgttcaacgacgccatggcggccgactcggccttcatcatggacgtggccatccgtggcgcgggccgccaggtgttcgacaagatcacctctcttgtggacgtcgcaggtggcaccggcacggcggcgagggtggtggccgccgcgttcccgcatatcaagtgcaccgtgctggaccttcctcacgtgatcgattccattccggcggaccatcgcggccgcgatgttgttaagtttgttgcaggagatatgatggatttcatcccccgagctgatgcactcctgctcaagtttgtcctacacgattggagtgatgaggactgcatgaagatactaaaacgatgcaaggaggcaattccttccagagaagcaggagggaaggtcattgtcatagatgttgtggttggatcctccacccaagcaatgtgccatggaacccaactgttgtttgatctgcttatttcgactacattaccaggcatgcagagaggtgagaaagaatggtgcaaggtattcaaggaggcaggattcactgactacaagataagccctgtgttaggtattcgatccattatcgaagtctttccatag</cdnaseq>

Protein Sequence

<aaseq>MEHEQLLQASTELMNHSLGYIRSMALGCAAKLGVADAIHHAGGR ATMDDLRAALSLHPSKLPYFLRRVMRVLVASGVFAHDEEEDDDDIYRVTPVSSLLVTA TGGNGGRSLLPFVLLQLSPPIYVTPATSMAEWLTSGEEETPFEMTHGAGLWTVCSRDP ELGELFNDAMAADSAFIMDVAIRGAGRQVFDKITSLVDVAGGTGTAARVVAAAFPHIK CTVLDLPHVIDSIPADHRGRDVVKFVAGDMMDFIPRADALLLKFVLHDWSDEDCMKIL KRCKEAIPSREAGGKVIVIDVVVGSSTQAMCHGTQLLFDLLISTTLPGMQRGEKEWCK VFKEAGFTDYKISPVLGIRSIIEVFP</aaseq>

Gene Sequence

<dnaseqindica>3406..3705#1..783#atggagcacgagcagctactgcaagccagcacggagctcatgaaccacagcctgggctacatcaggtccatggccctgggctgtgctgccaagctcggcgtcgccgacgccatccaccacgccggcggccgcgccaccatggacgacctgcgcgccgcgctgtccctccacccgagcaagctcccgtacttcctgcgccgcgtcatgcgcgtgctggtcgcctcgggcgtcttcgcgcatgacgaggaggaggacgacgatgatatctaccgcgtcacgcccgtgtcgtccctgctcgtcaccgccaccggcggcaacggcgggaggagcctgctgccgttcgtgctcctccagctctcgccgccgatctacgtgacgccggccacgagcatggccgagtggctcacgagcggcgaggaggagacgccgttcgagatgacgcacggcgcggggctgtggaccgtctgcagccgagacccggagctcggcgagctgttcaacgacgccatggcggccgactcggccttcatcatggacgtggccatccgtggcgcgggccgccaggtgttcgacaagatcacctctcttgtggacgtcgcaggtggcaccggcacggcggcgagggtggtggccgccgcgttcccgcatatcaagtgcaccgtgctggaccttcctcacgtgatcgattccattccggcggaccatcgcggccgcgatgttgttaagtttgttgcaggagatatgatggatttcatcccccgagctgatgcactcctgctcaaggtgagttatatgaaatgtgctccctccgtttttaataacgatgctaataaacttttgaattaatataaatgtgatcattcgtcttatttaagatttagtgtaaatatgttttaattaaatgtagtacaaatgtataaaaatataagtcgggtttaaagtatctttaatataaaataaatcacaacaaagtaaataatatttacatacttttctatgtaatatgaatagtcaaatgtcatgtttaaaacattgacagtgatacatatttaaaaatggcgggattatataatgaattgccaaccacacaatacaactgtgaaaaggatttgctagaccacaaatgagttttttttttctagccttttaatttgtgacactatttgtggtttggacaccgaagtgttctctccatggacatttttcggtccttaatatttacagatgtatactatataagagataccataaaattaagacatgtgtcaaaaaagtaacatggcatgcatgcttggatgttcctaaatgacggttaaacatttatagagtggtgaagcaggagatctaaatcattgatccttgggcaaatagctaatacggtccctgaagttttgcttcgggctcagtttagtcttttaggtttcaaatcgttcaaattaacaagtcctccaaattaatcatgtaggtcaacatagtccttggacccacaaaaagtcccacatgaccatgccaagtcatcctcgtatgcaatggtatgaatgaaatgactattctacccttatataccatatagaaaagaaagaaaaaaaagaagataaaatggttcacacgtgtatgatcgttttataattgtcactcatgattgctcagccaagcactgttcgcataaattcctttgtcggccacccatctgcaacaatgctgagcctaggctagcttgttatattttttgtcttttatttcttttctatatggtatataagagtggaatgctcatatcattcctaccgctgcatgcgagaatgacttggcatgctcacgtggcattttttaggtccaagaactatattaacccaaatgattaatttggtggacttgtttggacgatttaaaacatcgaggactaaactgagcccgaagttaaacttcagggaccgtattggctattcacccttgatcctccggtaaaggtatgtacgatgacaactaatagcacggcaattagtagcaggctcaagttgttaactactcccttaatttcaggttataagacgttttgactttggtcaaagtcaaactgctctaagtttcactaactttatagaaaaaagtcataatatcaggggggaaaaaaagcccctgggggtccctggtctagggggaaagaaagcccttcctgtgtggcgcatacggtgggcccagtccccccgaatgggccacgcccttggaaagagagcggcagctttcttcccctcccctcgggctcgaggtgccccgtcacacccctcgggcccgaggggttggatcgccccaaggcccatgtgggggcttgagcgggcgggagcgccgtccgccaggcgcatttatgagcggcgttgcaaccgcccccgccgtgttttatgcggcgtggctcagcatgcgccacagatcgctcgacgtgcgcctgcggccgctttttgaccggtctgtgacccgccgatggacggatgggacaggcggcagtccacccacgtcccggtttgtgtcagacggcgtgggggcaggtatgccttgtcccatcatgcacaggggtgggtcctgcaggttggtccgcccaatgtgtgtgtgcccacgaagtcgccaaacatttaatagggaatgatgggggatgtctcccgtgtcagccgtaaagtttcggtatgggccacccaaggttagccgcatggatcgcttccggcccaaggcacaagacgctttttatgtaggcaatgtgggcccctatcccgcggggagagcgtaggggcaatgcatgtggtatccccttcgtctataaaaggaggaccgtgccctacgagtaaagggacatctcttagaaaaccagattctggaaagaggctggccaagccctagcttgtactccgaggatcttaaatctttgtaaccatacgaaggtcatcacacagacaggagtagggtattacgcttgatagcggcccgaacttgtataaaccctctctctcactctctcgccttccaccttgtgagcttgattcccggagattcacctcgctcgcgcgagaacacgttcctcaatattgcacccggtcccccggccgagctcacaaaggggggtctcacagcctcccgctagagaggatcaccctccgccagagggagtagataatacaaaaattggctcggtgcatttattgagagtattttgtttactcaattgttgtatgaggatagtctctaaatagaaatgcctttgaacatgcctaatggtcatataatccaaccggttttgcgttgaaaagcgctcaaaagtatgtgtattgacatcttctgatgtacagggtatatatcaaattaactagcttagttaccacatttttagatggtaattaacaacattcttgattgcagtttgtcctacacgattggagtgatgaggactgcatgaagatactaaaacgatgcaaggaggcaattccttccagagaagcaggagggaaggtcattgtcatagatgttgtggttggatcctccacccaagcaatgtgccatggaacccaactgttgtttgatctgcttatttcgactacattaccaggcatgcagagaggtgagaaagaatggtgcaaggtattcaaggaggcaggattcactgactacaagataagccctgtgttaggtattcgatccattatcgaagtctttccatag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0463600, RefSeq:Os07g0463600