Os09g0463300

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0463300| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001069940.1 GI:115479622 GeneID:4347301| ...")
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Gene Name

Os09g0463300

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001069940.1 GI:115479622 GeneID:4347301

Length

3387 bp

Definition

Oryza sativa Japonica Group Os09g0463300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18188125..18191511

Sequence Coding Region

18188234..18188362,18188462..18188578,18188700..18189149,18189269..18189636,18189770..18189869
,18190447..18190506,18190622..18190705,18190835..18190960,18191080..18191388

Expression

GEO Profiles:Os09g0463300

Genome Context

<gbrowseImage1> name=NC_008402:18188125..18191511 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18188125..18191511 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggagaaggatcagaggaagggcgccatgccggtgaagaagggatcatcggccaacgcggtcaccaaaggcatcacgaacagaatccaagcgaggagagagcggaagctcgcactgcagcaagatgtggacaagctgaagaagaagctgaggcacgaggagaacgtccaccgagccctcgagagggcgttcacgaggccgctcggcgctctgcctcgcctgccgccgtatctgccatctcaaacactggcgcttctcgcggaggtggcggtgctggaagaagaggtcgtcaggctcgaggagcaggtggtcaatttccggcaaggactctaccaggaggccataatcttctcctcggccaagaacacgagcctccccggcggcgagggatgcgtgccggcgcagctcatgccgtcgagcccggtgccgaactcagaggtctctccggcaaattgtcattctcctcctactcgaccttcaatgaacggggtcgccggtgcaaagcaaacgccgagaaagccttctccttcggcggcggtggcgcaagacgaccgctccggcgccgggaaagagaaccagtcgtgcagtaacacaccggctagaaattgtcgccattcgccgctgctgcagaaggcatcaaaatccagactgccgacagcagcagcgcctgagaaacgcagggctactgctcagacgattagcacagtgccggaccgtaaaaggctcgcagacactgtcagcaataattcagaaaaagcttcccaagatgactcgagcgtgccgaacagattgtcggaggaactgttgagatgcctgctcgccatcttctcgcagatgggcggttcatcagcaagcggccaagacgaggagcaggcggcattgtctccttcggtttcaggttcttgcgagagctcagaggacgcataccctcaagatccttatggcatactggaattcggcacaagagacgttgggtcatacaagcgattccatgtaatcgacgccacctcgttcgatcagacggccatggagaacgacaccatgcttacccggaaactcaaggctttgatccggaggctttcatcggttgacctgacggggctctcccatcagcagaagctggcattctggatcaacatctacaattcgtgcatgatgaatgcatttctcgagcaagggatacctaccacccctcatatgctcgtggcaatgatgccgaaggcgacaataaatgtgggtgggcgcacgcacagcgccatgtcgatcgagcatttcatcctgcggctgccctacagcgtgaagcatgtgaatcctggtggagtgaccaagggcgccgccgacgacgtgacgatgcgaggcgtgttcgggctggagtggcctgagcccctggtcaccttcgcgctctcctgcggcagctggtcctcccctgctgtgagggtgtacacggcgcggggagtggaggaggagctggaggcggcgaagagggactacctgcagtcggcggtggtggtgtcggcgccggcgaaggtggcgatcccgaagctgctgcactggtacctcctcgacttcgccaaggacgtggactccctcatggactgggtgtgcctccagctgccgagcgagctgcggcagaaggcgatgaggatcgtggaggacggcagaaggggtgtcgccgccgagtcgcgccgcgtgcaggtcctgccgtacgaattcagattcaggtacctgctggcctcatga</cdnaseq>

Protein Sequence

<aaseq>MMEKDQRKGAMPVKKGSSANAVTKGITNRIQARRERKLALQQDV DKLKKKLRHEENVHRALERAFTRPLGALPRLPPYLPSQTLALLAEVAVLEEEVVRLEE QVVNFRQGLYQEAIIFSSAKNTSLPGGEGCVPAQLMPSSPVPNSEVSPANCHSPPTRP SMNGVAGAKQTPRKPSPSAAVAQDDRSGAGKENQSCSNTPARNCRHSPLLQKASKSRL PTAAAPEKRRATAQTISTVPDRKRLADTVSNNSEKASQDDSSVPNRLSEELLRCLLAI FSQMGGSSASGQDEEQAALSPSVSGSCESSEDAYPQDPYGILEFGTRDVGSYKRFHVI DATSFDQTAMENDTMLTRKLKALIRRLSSVDLTGLSHQQKLAFWINIYNSCMMNAFLE QGIPTTPHMLVAMMPKATINVGGRTHSAMSIEHFILRLPYSVKHVNPGGVTKGAADDV TMRGVFGLEWPEPLVTFALSCGSWSSPAVRVYTARGVEEELEAAKRDYLQSAVVVSAP AKVAIPKLLHWYLLDFAKDVDSLMDWVCLQLPSELRQKAMRIVEDGRRGVAAESRRVQ VLPYEFRFRYLLAS</aaseq>

Gene Sequence

<dnaseqindica>110..238#338..454#576..1025#1145..1512#1646..1745#2323..2382#2498..2581#2711..2836#2956..3264#ggagaagaggaatctgttgctttgctttgcttcggttagcttctttcacagctaaacaacgccttctttttcctcttttgatgatgatactgttgttttacgtgttcagatgatggagaaggatcagaggaagggcgccatgccggtgaagaagggatcatcggccaacgcggtcaccaaaggcatcacgaacagaatccaagcgaggagagagcggaagctcgcactgcagcaagatgtactacctgaattctgtcccaaattctcgcaatttgagaagcgcattggttcgtccgagttgtgttttgtgacgcaattcgctgcctggattttacaggtggacaagctgaagaagaagctgaggcacgaggagaacgtccaccgagccctcgagagggcgttcacgaggccgctcggcgctctgcctcgcctgccgccgtatctgccatctcaagtcagtgccacatttgcattcgcatttgcatcaaacgaaacgcattgttcttgctctgcttgggacaattcggctctgaattctgaacatgttcctgctctgaattctgcgatgtgcgaagacactggcgcttctcgcggaggtggcggtgctggaagaagaggtcgtcaggctcgaggagcaggtggtcaatttccggcaaggactctaccaggaggccataatcttctcctcggccaagaacacgagcctccccggcggcgagggatgcgtgccggcgcagctcatgccgtcgagcccggtgccgaactcagaggtctctccggcaaattgtcattctcctcctactcgaccttcaatgaacggggtcgccggtgcaaagcaaacgccgagaaagccttctccttcggcggcggtggcgcaagacgaccgctccggcgccgggaaagagaaccagtcgtgcagtaacacaccggctagaaattgtcgccattcgccgctgctgcagaaggcatcaaaatccagactgccgacagcagcagcgcctgagaaacgcagggctactgctcaggtaaaaacagtagtaataagatccttattgctgctgaatggtatttatttacacatttttctaccatgaactaacttcttctgaaccgtactgctgctgcatttttttttatcacacagacgattagcacagtgccggaccgtaaaaggctcgcagacactgtcagcaataattcagaaaaagcttcccaagatgactcgagcgtgccgaacagattgtcggaggaactgttgagatgcctgctcgccatcttctcgcagatgggcggttcatcagcaagcggccaagacgaggagcaggcggcattgtctccttcggtttcaggttcttgcgagagctcagaggacgcataccctcaagatccttatggcatactggaattcggcacaagagacgttgggtcatacaagcgattccatgtaatcgacgccacctcgttcgatcagacggccatggagaacgacaccatgcttacccggaaactcaagtgcgttcttgctagtgcaattttccgttcagttattacaagctcggtttggttgtctgtcgagtaggtggccgcctgacataattagcatcgctgatagaggtggttcatgtctacctggcaaaatctgcagggctttgatccggaggctttcatcggttgacctgacggggctctcccatcagcagaagctggcattctggatcaacatctacaattcgtgcatgatgaatgtaagctgtcagcctgtcactcataattgagcccacccatcctgaatttcttcatcttgatcaattatatctttgttcattttctcgttagagggaaatttccatttcggtgatagttacctccttcgttatcaatgtttgcctccgatagaatgacagaagaactactgtatgctggaatatttcgggaggttaattacttactaccgcattgcatattactagtactatatggtacagccagtacaacattacagcatgggcgtggttctgacgagtacgttctttaaccatgaactctgaacatagtgctggcatgtctgtgtactgttctcttcagtcatttagttttgcttaaagaaatgcttcctgtccccatgaccataaacaaaggctttaactaacactgatcaccatcatcatcgctttggcattattatccttaggcctaactatctcatgccatctgcgatacggcctaggaaagggtagttaaggtaggtagatgtagtagtgtagtgtcatgcctagtgcctcatacttgtccctaacacttgtcttccttgtcgtactgcaggcatttctcgagcaagggatacctaccacccctcatatgctcgtggcaatgatgccgaaggtatagcactaagtaacttcttgcaagcagcacaaatcatgatgcgccggtgattaacgaagtaatcaagtctctgacgagagagtgatctccgtgtttcgctctctgttttcaggcgacaataaatgtgggtgggcgcacgcacagcgccatgtcgatcgagcatttcatcctgcggctgccctacagcgtgaagcatgtaaggcgttacagtatagttttgtcatggtggatacggccatcgtagtgatccgggtagattggtgttccggttgcacagcaccacacgctaaaactaacaacctatatatggctcgtgaatgaacaggtgaatcctggtggagtgaccaagggcgccgccgacgacgtgacgatgcgaggcgtgttcgggctggagtggcctgagcccctggtcaccttcgcgctctcctgcggcagctggtcctcccctgctgtaagatctccatgattccgtcagatttttgcagcattacagcatgtaaaaattccgtgtagtttgtgatgaggtgttgtgtgattgtgtcttgttcttggtcatgttttttttttcaggtgagggtgtacacggcgcggggagtggaggaggagctggaggcggcgaagagggactacctgcagtcggcggtggtggtgtcggcgccggcgaaggtggcgatcccgaagctgctgcactggtacctcctcgacttcgccaaggacgtggactccctcatggactgggtgtgcctccagctgccgagcgagctgcggcagaaggcgatgaggatcgtggaggacggcagaaggggtgtcgccgccgagtcgcgccgcgtgcaggtcctgccgtacgaattcagattcaggtacctgctggcctcatgaagagaggccagtgagtagcagcaatcagcgagtgaattcgagggtgttttactgcaccttgtacacaggcttccaataattgtgagttttgttcttcggtgatgtgaatgaatgaaaggaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0463300, RefSeq:Os09g0463300