Os07g0471300

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0471300| Description = Similar to Argonaute 4 protein| Version = NM_001066144.1 GI:115472020 GeneID:4343201| Length = 5459 bp| Definition ...")
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Gene Name

Os07g0471300

Description

Similar to Argonaute 4 protein

Version

NM_001066144.1 GI:115472020 GeneID:4343201

Length

5459 bp

Definition

Oryza sativa Japonica Group Os07g0471300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17554904..17560362

Sequence Coding Region

17554979..17555079,17555181..17555311,17555408..17555529,17555614..17555720,17555841..17555973
,17556079..17556195,17556297..17556404,17556496..17556567,17557199..17557321
,17557408..17557570,17557877..17558001,17558092..17558226,17558311..17558414
,17558509..17558571,17558667..17558730,17558923..17559055,17559151..17559224
,17559340..17559434,17559536..17559567,17559938..17560092

Expression

GEO Profiles:Os07g0471300

Genome Context

<gbrowseImage1> name=NC_008400:17554904..17560362 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:17554904..17560362 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcatggccggctgccccgccggcatcccgtcgcaggcgctgcagctgctcgacatcgtgctgcgcgacatggtgctcgccgagcgcaacgacatggggtacgttgcgtttggtcggtcttacttctcaccggggctcggatcgagggaactcgacaagggcatctttgcgtggaaggggttctaccagagttgccgggtcacgcagcagggcctttctctgaacatagacatgtcttcgactgctttcattgaacctggtcgggtgctgaattttgtagaaaaagctattggacgtcgaatcactaatgctattactgtgggatattttttgaacaattatgggaatgaattgatgaggacccttaagggtgttaaggttgaagtcactcaccgaggaaatctacgcaagaagtaccgcattgctggcttcaccgagcagtctgcagatgttcagacgttcacatcatctgatggtatcaagactgtcaaggagtatttcaacaaaaaatacaatctgaagttagcttttggttatcttccatgcctgcaagttggcagcaaggagagaccgaattacctgcccatggagctttgcaatatagttcctggacaacgatacaagaaccggctcagtccgacacaggtttccaatctgattaacataaccaacgatcgtccttgtgaccgtgagagctccattcgtcagactgttagcagcaaccagtataacagtacggaacgcgcagatgagtttggcatagaagttgactcttatcctactactttaaaggctagagttttgaaagctccaatgctgaagtaccatgattctggaagggtgagagtatgcacgccagaggatggggcgtggaacatgaaagacaagaaagtagttaacggtgctacaattaaaagctgggcatgtgtcaacttgtgcgagggtttggataatcgtgttgttgaagcattctgccttcaattggtcagaacgtccaaaataactggactggactttgcgaatgtgagccttccaatattgaaagctgatcctcataatgttaaaactgatcttcctatgcgctatcaggaagcatgcagctggtcgagggataacaagattgacctcctacttgttgtaatgacagatgataaaaataatgccagcttatatggtgacgttaaaagaatctgtgaaacagaaatcggtgtattgtcacagtgttgtcgagcgaagcaagtctacaaggagaggaatgttcagtactgcgcaaatgttgctcttaagatcaatgccaaggctggaggaaggaactcggtatttcttaatgtagaagcaagtttaccggttgtttcaaagagcccaactattatatttggtgctgatgttacccatcctgggtcctttgatgaaagtaccccttccattgcttcggttgttgcttccgcagactggcctgaggtgaccaagtataattctgttgttcgtatgcaagcttctcgtaaggagattatacaagatcttgatagcattgttagggaacttctcaatgcattcaaaagggactccaagatggagccgaagcagctcattttctacagggacggcgtaagcgagggtcagttccagcaagttgtagagagcgaaataccggagatagaaaaggcttggaagtctctgtatgctggcaagccacgaattaccttcatagtggtgcagaagaggcatcatacaaggctgttccccaacaattacaatgatccacgcggcatggatgggactggaaatgttcgtccaggcacagtagttgatacagtgatctgtcaccctcgagagtttgatttcttcctgtgcagccaagccgggatcaaagggacaagccgtcctagccattaccatgtgctgcgcgacgacaacaacttcaccgcagatcagcttcagtctgtcacaaacaacctgtgctacttatatacaagctgcactcgctcggtgtctattccacctcctgtttactacgctcataagctcgcattccgcgctcgtttctacctcacccaagttcccgtcgccggtggagatccaggtgctgctaagttccagtgggtacttccagagattaaggaagaggtgaaaaagtccatgttcttttgctag</cdnaseq>

Protein Sequence

<aaseq>MVMAGCPAGIPSQALQLLDIVLRDMVLAERNDMGYVAFGRSYFS PGLGSRELDKGIFAWKGFYQSCRVTQQGLSLNIDMSSTAFIEPGRVLNFVEKAIGRRI TNAITVGYFLNNYGNELMRTLKGVKVEVTHRGNLRKKYRIAGFTEQSADVQTFTSSDG IKTVKEYFNKKYNLKLAFGYLPCLQVGSKERPNYLPMELCNIVPGQRYKNRLSPTQVS NLINITNDRPCDRESSIRQTVSSNQYNSTERADEFGIEVDSYPTTLKARVLKAPMLKY HDSGRVRVCTPEDGAWNMKDKKVVNGATIKSWACVNLCEGLDNRVVEAFCLQLVRTSK ITGLDFANVSLPILKADPHNVKTDLPMRYQEACSWSRDNKIDLLLVVMTDDKNNASLY GDVKRICETEIGVLSQCCRAKQVYKERNVQYCANVALKINAKAGGRNSVFLNVEASLP VVSKSPTIIFGADVTHPGSFDESTPSIASVVASADWPEVTKYNSVVRMQASRKEIIQD LDSIVRELLNAFKRDSKMEPKQLIFYRDGVSEGQFQQVVESEIPEIEKAWKSLYAGKP RITFIVVQKRHHTRLFPNNYNDPRGMDGTGNVRPGTVVDTVICHPREFDFFLCSQAGI KGTSRPSHYHVLRDDNNFTADQLQSVTNNLCYLYTSCTRSVSIPPPVYYAHKLAFRAR FYLTQVPVAGGDPGAAKFQWVLPEIKEEVKKSMFFC</aaseq>

Gene Sequence

<dnaseqindica>76..176#278..408#505..626#711..817#938..1070#1176..1292#1394..1501#1593..1664#2296..2418#2505..2667#2974..3098#3189..3323#3408..3511#3606..3668#3764..3827#4020..4152#4248..4321#4437..4531#4633..4664#5035..5189#gtggagctgtccggcagcaggaagttcaaggtggccatccggcacgtcgcgccggtcagcctgcaggacctgcggatggtcatggccggctgccccgccggcatcccgtcgcaggcgctgcagctgctcgacatcgtgctgcgcgacatggtgctcgccgagcgcaacgacatggggtagaaagaactcgatcagctgcctcgattgagatctcttgaggatttcgtaaactgggaattgatgaattcgtgtaatcgttttcgttttgaatgtgcaggtacgttgcgtttggtcggtcttacttctcaccggggctcggatcgagggaactcgacaagggcatctttgcgtggaaggggttctaccagagttgccgggtcacgcagcagggcctttctctgaacataggtcagatttgtgtttcagtttgtttctgaacttgtacttgatcgagtttacctgcaattcatgagaatgattaggtgatggcatttttttttgcagacatgtcttcgactgctttcattgaacctggtcgggtgctgaattttgtagaaaaagctattggacgtcgaatcactaatgctattactgtgggatattttttgaacaattatgggaatgaagtgtgtaatccaaatgctttcccccatgatttgtttgcgtggagttgatcttgacttgtttttccgtgcttcgtgaatttgcagttgatgaggacccttaagggtgttaaggttgaagtcactcaccgaggaaatctacgcaagaagtaccgcattgctggcttcaccgagcagtctgcagatgttcagacgtaaggagcctagcttaccttctccctgatcttaacagtttctgtgtaatgttgctatttgaattctcttgcatagcttaaatcttaccaattattttgttggatcccaaaactattaaggttcacatcatctgatggtatcaagactgtcaaggagtatttcaacaaaaaatacaatctgaagttagcttttggttatcttccatgcctgcaagttggcagcaaggagagaccgaattacctgcccatggaggttcgtgcatatacttcacatttaactgaaatgttcgattcttttctacatcctctgcctttacacatgctaattctttgtgttgaaatttgatttggatttcagctttgcaatatagttcctggacaacgatacaagaaccggctcagtccgacacaggtttccaatctgattaacataaccaacgatcgtccttgtgaccgtgagagctccattcgtcaggttcctgcttatgcttattttctgtgatattttgtcaggtttttactgtgtgggtaaatacgttttttatttctctctaacccatctttcctttttcttagactgttagcagcaaccagtataacagtacggaacgcgcagatgagtttggcatagaagttgactcttatcctactactttaaaggctagagttttgaaagctccaatggtaatcctacttatttttttctcatcagtatctccttttgtttttcagtttttccgtacttctgtccttacatttgtgagtaatgttgtagctgaagtaccatgattctggaagggtgagagtatgcacgccagaggatggggcgtggaacatgaaagacaaggtacatcatgttgaactgaaacatttcttaaactttttctataatgttttgtaaatttattactatatcacagaaaatggttagttttagtgatggggttattgttcttcatctctctagttttcaaataaaagtattgatgactattactgttccattttgacacctaacaactcttaaattattaaactgatgaactaccgaagtttcatgcctatatgtctaagatacaatacacttcgataatactactatagcataagttttcttttttctaaaagagatgagtggtctcgatgacaactatttacaaatggatggagtacctgtttattgtctatagttgagtgttgatatgttgccagacaagctacagttggttcagagtcttggttccctcaaacttcttatttgcttaaacaaaatctgtagagctcttgtggattgttcccaaaaagagaaactggttggaagatcctggtctaccaaccctgtgcaatattttgaagtttgcgcaaatagttttaggaactgatttctttttaggttgtatactctgtctattccatttacccccttctatattcttgtcttctctccacactgtttgaacaattcttttgatgcgcagaaagtagttaacggtgctacaattaaaagctgggcatgtgtcaacttgtgcgagggtttggataatcgtgttgttgaagcattctgccttcaattggtcagaacgtccaaaataactggactggtaatttagcttttcatcatcctctttttgctgttttgatcattttatttgatgtactcttagctaattttttactttgatttcaggactttgcgaatgtgagccttccaatattgaaagctgatcctcataatgttaaaactgatcttcctatgcgctatcaggaagcatgcagctggtcgagggataacaagattgacctcctacttgttgtaatgacagatgataaaaataatgccagcttatatggtaactagcatccaaattcgctctaatgtgtggaataatattattcattaatgtctctttataggttagagttatattggctattcaatatagtatcttcttctaccatgcatctactctgttataattttagccccaacaaagttcttaaaatctctctgattaaattgatgttttttttttgctttttttaaaggaatatgcaagcccagtttaacaaaattagaattcgaatagcaaatatatatttcttgtcttgaagaaaattctcacttgtgccatgcctgatgacacttataaccacaggtgacgttaaaagaatctgtgaaacagaaatcggtgtattgtcacagtgttgtcgagcgaagcaagtctacaaggagaggaatgttcagtactgcgcaaatgttgctcttaagatcaatgccaaggtaaacttgatcacctcccagaatctttgtttcgcaaagcttattgaaccacaagattcaagatgtaatatatattcaccatgtctgcaggctggaggaaggaactcggtatttcttaatgtagaagcaagtttaccggttgtttcaaagagcccaactattatatttggtgctgatgttacccatcctgggtcctttgatgaaagtaccccttccattgcttcggtaagatatatatatttctttctatcagaaaatataattgcatctattactgtaacagctttcatctgacggggttccatttaggttgttgcttccgcagactggcctgaggtgaccaagtataattctgttgttcgtatgcaagcttctcgtaaggagattatacaagatcttgatagcattgttaggtgagatcttcatgctgctcagctaaattctagaattgcatgccagtgtgccaccatttggcagttctttaatttctaaaatataaaattgcagggaacttctcaatgcattcaaaagggactccaagatggagccgaagcagctcattttctacaggttcatattctccatgtttgtttttttttcttaattgtacgtgctcctttgttgatcataccgagacactgataattgtcctgtttcatcatcagggacggcgtaagcgagggtcagttccagcaagttgtagagagcgaaataccggagatagaaaaggtataagcaatttttttcttttcctggttacgactctccatggttgtaatcttgtatttttttcctgctctatcaatagaacttcgcaccgtctcgtgcgagtcgttcaaaaaatttgatgactgaacagtgcaaaacgttttaaccatctggttaaaaaatatttgttatcgtaattcactgtttcttcaggcttggaagtctctgtatgctggcaagccacgaattaccttcatagtggtgcagaagaggcatcatacaaggctgttccccaacaattacaatgatccacgcggcatggatgggactggaaatgttcgtccaggttgaaaatcgatggcctctcccgtaaacgttgtttaattaccctgtttggtcaattgcctaactcgtttttcttcttctgtaaataaattccaggcacagtagttgatacagtgatctgtcaccctcgagagtttgatttcttcctgtgcagccaagccgggatcaaagtaagatgcctattgcctatagcacgctgcagagtacaaatgagtgaactgtcctctagtctaattacttaatacaagagggtgccctaacgatgtttaaattgtaaaattgcaggggacaagccgtcctagccattaccatgtgctgcgcgacgacaacaacttcaccgcagatcagcttcagtctgtcacaaacaacctgtgctacttgtaattgtgctctgctcttctttgccgtgattgctgatgtctgcattttgcactcgcgcggttgaatgatgacttctttttttttgctgtttactcgacagatatacaagctgcactcgctcggtgtctattcgtaagtcacttctctcttagctatgagctctgttttatcacagaagagtattcaaataagcttttctcctaaaaaaccatgaatgtctgcatttttgattcttttctcctaaatgtccattgtgctgcaaagaacttgaagtttttgtacagtcataagtcgagtgaaattctatcaaactcaagggtagttaaataaatgatagaactattgggctttccaaagaacatgaagagggatttaggaatgcatgaatggaactagagttttttttttaagatagtcgataaagtccggcctttactactgctacaactatctcaatttgtcatgctgttctgtcttaacattgtcttgtttgctgttgcagcacctcctgtttactacgctcataagctcgcattccgcgctcgtttctacctcacccaagttcccgtcgccggtggagatccaggtgctgctaagttccagtgggtacttccagagattaaggaagaggtgaaaaagtccatgttcttttgctagtcgtccttgtgcccccctgaaactgaagcctggagccagccggcaagctctggaaatgctctgaataatcaaacttggaagaataagcacctgcccaggttgccattcgtttccatgtggcatggaggatggcatcctgaaaaggatattgtcatgtttgtgtggtttttaaacgacattgaagtttatctccggtgttactatctcagcactttggatgttttattttgttatgtctgaagatatagacacaaaacttcatttttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0471300, RefSeq:Os07g0471300