Os07g0475000

From RiceWiki
Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0475000| Description = Conserved hypothetical protein| Version = NM_001066155.1 GI:115472042 GeneID:4343212| Length = 8447 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0475000

Description

Conserved hypothetical protein

Version

NM_001066155.1 GI:115472042 GeneID:4343212

Length

8447 bp

Definition

Oryza sativa Japonica Group Os07g0475000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17796324..17804770

Sequence Coding Region

17796326..17796824,17804409..17804650

Expression

GEO Profiles:Os07g0475000

Genome Context

<gbrowseImage1> name=NC_008400:17796324..17804770 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:17796324..17804770 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccacccctcctcctcctcctcctcttcctccttgccgccgcgacggcgacggcgacggcgacgggcaacgcgctgccgccggagccgaagccggcgcggtggccggacgtcttccacgcgaggctgttcacgaacctgaccaaccactccgccgcgtcgacggggccaccgctgcgtgtcgccgacctctactacgactggtcgcggcggcgcaacctcaacctgatccgctaccagctcgccgccgccgacgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctcctgccgcaccgagcgcttccccgtcggcgtgctccgcccgggctggctcgccgacggcggcggcgtcgtctacctcggccggtggcgcaccggcgggatcgagtgcgacgtgtgggacaagctggggttcgtcgtctactaccaggaggtcgccaccgggcgccccgtccgctggaacttcctcgacaagacagggatacagcaattcgtgatgagcttcgaggtcggcgtgaccctggaggacgattcccagtggcaggcgcccgcacactgcttccctgccgccgccgcagacgaagatgaagaggaagaggaagatgaagaacaggatgagatgatcaagagcagctatgatcacattgagggtgtggatgacgggctcgacgccgccaggttactcaggatgctcgcaggagctgcggcgttttag</cdnaseq>

Protein Sequence

<aaseq>PPLLLLLLFLLAAATATATATGNALPPEPKPARWPDVFHARLFT NLTNHSAASTGPPLRVADLYYDWSRRRNLNLIRYQLAAADDPLYDVEWDNGTTFYFDS RSCRTERFPVGVLRPGWLADGGGVVYLGRWRTGGIECDVWDKLGFVVYYQEVATGRPV RWNFLDKTGIQQFVMSFEVGVTLEDDSQWQAPAHCFPAAAADEDEEEEEDEEQDEMIK SSYDHIEGVDDGLDAARLLRMLAGAAAF</aaseq>

Gene Sequence

<dnaseqindica>3..501#8086..8327#ggccacccctcctcctcctcctcctcttcctccttgccgccgcgacggcgacggcgacggcgacgggcaacgcgctgccgccggagccgaagccggcgcggtggccggacgtcttccacgcgaggctgttcacgaacctgaccaaccactccgccgcgtcgacggggccaccgctgcgtgtcgccgacctctactacgactggtcgcggcggcgcaacctcaacctgatccgctaccagctcgccgccgccgacgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctcctgccgcaccgagcgcttccccgtcggcgtgctccgcccgggctggctcgccgacggcggcggcgtcgtctacctcggccggtggcgcaccggcgggatcgagtgcgacgtgtgggacaagctggggttcgtcgtctactaccaggaggtcgccaccgggcgccccgtccgctggaacttcctcgacagtaagatttcgatgaatttaacttcatttttcatatatcgtatttagtgagtgtttggtaaaattttctcaattttgtatgcaaggtagggagtaggagttgtatcttgtgagtaacagggttcactctttcggaacataggacaaaataattgaaattttgaacagatttttgttgaatttaaacaaaatttttctaaatccaaacaaaatttaaaattttggctggtgggaattcttacagttatctgttgacgcaaagttcctttccaaaactgaattctgtaactcatccattcatgatcgatccatccatccatcctttctacgtacctgtcgttctctagacaaatacttgatgagatgtacaaataccaccgttgattaattaagtggcaagtaaatagtaattttattatctttgataatatatcgaggaccataaaccttctgaaatcataaattgagcgatagtattagactactagccaaaaatcttttatgaattttaattgaactccggtaattaatctttttttaactaggagagtcaagctccccccattttcattaatagaaatcagaaactacatgctgttcagaccttcaaacattttcagcaacatcaggaatgttggaaatatagtcattaatcggtatattttaatccaagaaaatgaaacaatgatcatggcataagcagtgtagggtgatcttaacataaccagtagcatactatgcgcatcatgaatgtcagaaacaggaacataccagtaacgcgataacatgctagaggcatcatgtagaacaggaacaagaacatagcgcacacagtatagcgctaacaatgggaacaggaatagcgctaacagcagtagcaggaggaggagaagattataccccgagaatggccctccgctggatggtgaggcagaattgcctccgttgttgtagtcgttcacggcacctcctcctggcgcaccagctccggatccagcttctgtcggcggcggcgtaccaccagctcctgtcggcggcggcgtaccacctccgccagtagcggcggcagcaactccagacatggcgatgagcagagcagtcgtgcaggaggcactccccaaaaacctgatcacccgcctacccggtgcagatctcaggcaaaggtgtggtttcggaggcactgcttcttccaatctctcgtgcgcgcaagagatcagaagcggggaagcgagagcaactcaggcgcggagaaggagaaactaacaccgggaaagaagcgaagaagacggatcggactcgcggcctccttatctatcaggagaaagaacgtggacgcgctgttgcggagggaatcgtgggaacgtgggttagtggctgcaaaaggatagcgacgtgacgcacgcacgccgccagccagccagccagccacgccccgcccacgcccacgcccacgcccacgcccacgcccatgccccggcccggcccggcgcgcgcgcgcgcgtgtggcattccgacccccacctcaactggtcaacagggagcctctaataactccctatttaggttgagatatttctcgcttaaatcctgaggtggtattattatccttaacatttattatgggcctttgagatttaatagaataaattgggcctagcccaattattctaacaatccccaccaaatttcaaggctcataaaaatgttctcaatgttgtgcctgtttgatataccagggttttggtggagcctgttaagttgaacttccacctaggaaatgagctacatcagaccacaactgaacaatggactatgccttgaattgtaagttttgtgtgatcaggtttcactcagaaccttgactggtactgggctgccgttcgcatcccctctgtttggagcatataagtcaaactccaggcctttcatgagtatctagagattgcccaaacctcatagactgtgactagcagtcgaactcatataggtgtgttccttctgagatgttctgtaggtcaacatctctgcttggaaaagccactcggatcacattaagacataagccatcctaccatgcaggaaagaagagaagcacatcatgaaaatgagcccttttcaagggtctcttctctcagtcacacaatagtttgtttcaccatccaaattcacgggatctccgatcacaatggacaggtttccactattatgcaaccttaggtgggtatcaagcccatttccctcgatgcactgtctatcacattacgtggtagccccttggtaaactgatctgccagatttctagccgtttggacatagtccaatgctatcacttcggagtttttctgctttctgacagatttcagtcttctcttgatgtgtctagatgacttcatgttgtcctttgaactgttcactttaataatcactgtttgattatcgcagttcattaggatagctggcactggtttttcaaccaccggcaaatccatcaggagttcacgaagccactcggcctcaactgtcgcagtatctagtgctgtaagttctgcttccattgttgacctcgttaagatggtctgcttgcaagacttccaggaaacagcgccacctccaagtgtgaacacatatccacttgtggcttttatctcatcagcatcagatatccagtttgagtcactatacccttctagtacttttggatacccggtatagtgaattccatagctcatagtgccctttagatagcgcattactctttccagagcctgccaatgatcatcttccggatttgagacaaaccggctcagcttgcttacagcaaatgagatgtcaggcctcgttgcgctagccaagtacatcaatgaaccaatgatttgagagtatctcagttgatcccttgctattcttcggtttttccttaatagcacgctgggatcataaggagtaggagctggcttgcagtcactatatccaaagcgactcaaaaccttgtccacatagtgggattgcacaagtgtaatcccaccctcatctcctctttgaagtttgatgttaagaataacatcagcctctcccaaatccttcatttcaaaactcttggaaagatagtctttgacctcctcaatcacattaagactggtcccaaagatcagtatgtcatcgacatataagcacaagatcaccccttctcccccaccatagcgatagtatacacatttgtcagcttcgttcacaacaaagcctgcagatgtaagcgtggtgtcaaacttctcatgccattgcttaggtgcttgcttgaggccatacaaggatttcaatagtttacacaccattccctcctgaccttctagtacatacccgtctggttgatccatatagatctcctcctccagctctccgtttaggaaagctgtcttaacgtccatctgatggacgagaagaccatgagaggctgccagagcaagtagtactcgaatcgtggtcaagcgagcaactggtgagtatgtgtcgaagaagtcctcgccttccttttgggtataacccttggccacaagccttgccttgtacttttcgattgtgccatcaggcctaagctttttcttgaaaacccatttgcatcctacgggcttgcacccatatggacgctcaacgaattcccaagtaccattagacataatcgagtccatttcactgcgtactgcttccttccagtagtcagcgtcaggagatgaatatgcctcttctatggttcttggggtgtcatccacgaggtatacaatgtagtcatctccaaaggattttgcaaccctttgtctcttactcctgcgagtatctacaatgttgtcctcctcaggattttcctcaggcgtttgatcattgtgttctatcggtgcaaagtgctcatggggcatgacagtttctttactagaagtgctaggtgtatatttcatagaaaattcattctcaaagaatgtagcatctctggtctcaagaattgtaccagcatgcatgtcagagtttactattaagaatctataacccacactgtggatagcataaccaagaaacacacaatcaacagtttttggtccaagtttccgctttttggctataggtacatttaccttggccaaacagccccatgttcgtaggtatgagagatttaatttcttcctttcccattcctcgaatggtgttacttccttatgcttcattggaattttattcaggacatgacacgcagtcaaaactgcctcaccccaccattccttggaaagccccgcagtgtctaacatggcattcaccatctcagttagagtacggttctttctttcggccaccccatttgattggggtgaatagggaggcgtcatctcatgaataattccaaactcttcgcaaaaggatgcaaactcattggaaaaatactccccacctctatcagacctcaaccgtttgattttcctttcaagttggttttctacctcagctttatagattttaatgtaatgcaatgcctcatcctttgttttcaatagatacacatagcaaaatctagtgcaatcatctatcagtgttatgaaatatttctttccccctttagtcaacacgccgttcatttcgcacaaatcggaatgaacaagttctagaggtgccaaattcctcgcctcagatgccttgtgagacttgcgaggttgtttcgattgaacacaagtgtggcacttggaacctttgaccaaagtgaattttggaattaaactcatgttagctaagcgcgtcatgcaaccgaaattcacatgacagagtcgcgaatgccacacattagactcatcattctcgctaatatggttcacagcattatgattattacacatgtcattcaaagaaaagcggaacaagcctccgctgtcataaccttttccaacaaaagtcccatatttagatacgacacatttattggactcaaacacaagtctaaaaccttctctacacaatagagagccgctaactagattcttctttattgaagggacatgctgtacgtttttcagctgcacggtctttcccgaagtaaacttcagattgaccgtaccaacaccatgaatagccgcaagcgaaccgtttcccatcaacaaggaggaacctctcccgacctgataagaagaaaatagagaaatgtcagcacatacatgaatattagcaccagtatccacccaccaatcaggtgaatgaaaaacagagagaactgtaggtaatattttaccgtaccccgatgttcctccgccctcgctaatgatcatgttggcagacttcctgtctttgcgctcaggacagtccttggcccaatgcccagacttgccacacacaaagcagtctccttttgtctttcccttgcctttcttcttaaaattggttgcagccttgggtttgacatcaggcttgactttcttgttgttgtgggatgcatgagggttcttcttctgtaccatattggcactagaacctccctcaacctttttgccccgcacgtcctttgccctcgccttctcctcaacacccaaagagccaatgagatcaggaacactgaactcttgtctcttgtgctttagagaagtggcaaagtccgaccaagaaggtggtagtttggcaataatgccacccgccacaaacttgtctggcaactcacagttgttgttctcaagttccttagccagcatctgaatctcatgagcttgttctactacagaacggtcatcgaccatcttgtagtcatagaactgctccatgacatacagctcactgccagcgtcagaaactccgaacttagcctcaagtgcatcccacatgtccttcccagaaggcatgtgcatgtacacgtccactatgttgtcagcgagtacactgatcaatgctccacggaacaggcaatccgaagcctcgaacttagcctcttcctcaggagagagaggtggttcagttcgtttgccccgtgaaacatagaagcactgcatcgctgtcaaccacaatagtgcacgtgctttccatctcttatagtttgaactatcaaaagcatgtggtttcagtgcagcagcaaagccaactaccgaaaatgacctatcaggtttttggattgttggaaatatagtcattaatcggtatattttaatccaagaaaatgaaacaatgatcatggcataagcagtgtagggtgatcttaacataaccagtagcatactatgcgcatcatgaatgtcagaaacaggaacataccagtaacgcgataacatgctagaggcatcatgtagaacaggaataagaacatagcgcacacagtatagcgctaacaatgggaacaggaatagcgctaacagcagtagcaggaggaggagaagattatatcccgagaatggccctccgctggatggtgaggcagaattgcctccgttgttgtagtcgttcacggcacctcctcctggcgcaccagctccggatccagctcctgtcggcggcggcgtaccaccagctcctgtcggcggcggcgtaccacctccgccagtagcggcggcagcaactccagacatggcgatgagcagagcagtcgtgcaggaggcactccccaaaaacctgatcacccgcctaggcactccccaaaaacctgatcacccgcctatccggtgcagatctcaggcaaaggtgtggtttcggaggcactgcttcttccaatctctcgtgcgcgcaagagatcagaagcggggaagcgagagcaactcaggcgcggagaaggagaaactaacaccgggaaagaagcgaacaagacggatcggactcgcggcctccttatctatcaggagaaagaacgtggacgcgctgttgcggagggaatcgtgggaacgtgggttagtggctgcaaaaggatagcgacgtgacgcacgtcgccagccagcctagccacgcccacgcccacgccccggcgcgcgcgcgcgtgtggcattccgacccccacctcaactggtcaacagggagcctctaataactctctatttaggttgagatatttctcgcttaaatcctgaggtggtattattatccttaacatttattatgggcctttgagatttaatagaataaattgggcctagcccaattattctaagacactctccctcttcaggtattaccctgtctaggagatggtataaaaaaaacagccttaacttctctaaattgttacccttacaggcaacatccaaccgtaggagaacaaaacacattatctagagaactcgacctgactagaagacccactacagccatctatcacaaggtattagcatttagcactacgatggtccggcgatgttttcagcatcgcagcctccttgacctgaagctccatccattttgagccccatatatatatacttcacttcccagttcccactcgcctcagcaggttctttatctggtaatcaatctggtcagcaacagatagttctacctgcacaattctctgaaacacgcaattaactaattaataactaatacaatgcattgctgcatttggggtggctcacatcacatgcagagacagggatacagcaattcgtgatgagcttcgaggtcggcgtgaccctggaggacgattcccagtggcaggcgcccgcacactgcttccctgccgccgccgcagacgaagatgaagaggaagaggaagatgaagaacaggatgagatgatcaagagcagctatgatcacattgagggtgtggatgacgggctcgacgccgccaggttactcaggatgctcgcaggagctgcggcgttttagttaccaagtggctcgaatttttgtgcaaacatatactggtacaggcttacagcacagtactgtataagagagtgtggttaattcaggaatttttcaagaagggttaattggatccatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0475000, RefSeq:Os07g0475000