Os07g0475400

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0475400| Description = Similar to Expansin-like protein A (Fragment)| Version = NM_001066156.1 GI:115472044 GeneID:4343213| Length = 3449 b...")
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Gene Name

Os07g0475400

Description

Similar to Expansin-like protein A (Fragment)

Version

NM_001066156.1 GI:115472044 GeneID:4343213

Length

3449 bp

Definition

Oryza sativa Japonica Group Os07g0475400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17822408..17825856

Sequence Coding Region

17822778..17823026,17823160..17823292,17824297..17824475,17825305..17825426,17825550..17825697

Expression

GEO Profiles:Os07g0475400

Genome Context

<gbrowseImage1> name=NC_008400:17822408..17825856 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:17822408..17825856 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtgctcctctccatcctctcctcctctttcctgctgctcttggcggcctcctcctcctccacgccacgcgcgtctgcgtgcgagaggtgcgtgcgcaacggcaaggccgcctactcgccctcgctctcccctctcccacctggtggtggaggaggatgtgggtatggggccatggccatggagatggagctgaatgggggattccttgcagccgggggtccaaggcagcacaggggagggcttggatgtggaaggtgctttcagatgagatgcagaaatgcagaggtgtgcagtaacgcaggcgtccgcgtcgtgctcaccgactttcacaggagcaacagtacggacttcctgctcggtgggcccgctttcgcgggcctggccaagcccgggatggcccacaagttgaagaagcttgatgctctgtcagtagagtacagaagaattccctgcgactacaaggacaagaacctgtccatattagtagaagagcagagcaaaaggccaaacaatttggtcatcaagttcctttaccaaggtggccaaactgatatcttagcggtggatgttgctcaggtgggatcatcggattggcggttcatgacccgggtctatggacccgtttggagcatcgaccgggcccccaacggaccgcttcagttccgggctgtggtgaccggtggttacgacgggaagtgggtctgggccgaccgggaggttcttcccgccaactggcagcccggccaggtgtacgacaccggtgcgaggatcgccgacgtggcgagggaaagctgcctagactgcgccacgctggactggaagtga</cdnaseq>

Protein Sequence

<aaseq>MAVLLSILSSSFLLLLAASSSSTPRASACERCVRNGKAAYSPSL SPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNA GVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVEYRRIPCDYKDKNL SILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPN GPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADVARESCLDCATLDWK </aaseq>

Gene Sequence

<dnaseqindica>2831..3079#2565..2697#1382..1560#431..552#160..307#ctctctctcttccgtttgctatatattggcacttaattaacacagtggcctaagcagaagccatgtgctagggaaagcaagtcttcctcctctctctctctctctctctctctctgcttctctcacactctactgctgctcatcaccatcatcaccaccatggcagtgctcctctccatcctctcctcctctttcctgctgctcttggcggcctcctcctcctccacgccacgcgcgtctgcgtgcgagaggtgcgtgcgcaacggcaaggccgcctactcgccctcgctctcccctctcccacctggtaagcacacacttcactccctgaccaagaactggttgatccgattgattagttgaggatgttgcaagaacttaacaagatgtgtgaatcttggtgtgtgatggatggatggatggatctcaggtggtggaggaggatgtgggtatggggccatggccatggagatggagctgaatgggggattccttgcagccgggggtccaaggcagcacaggggagggcttggatgtggaaggtgctttcaggtactacagggacaaagaggcctaatttgtttcctgtcttgtcttcattttcttttttaatttttgctcccatttctggccatgtccttttctgatttaaccaaaatgtcccttcttgcttgcttgttcctcacatggggctggttgttgttcaagaacttgtgggatttttgtttttcttttgagaccgacgctttgcaaacaaaagaagttttagttagtttctggaattggtggtaggactggtagttccttcatgtttttttttttactttttaggaggtgatgttttgaagaagcaaacaatcaactaattgtaagagcatctattatttatttttttgattgttttgtttctacttagtaagatacttagattccgattggcacaactttttccaaaaaaaaaaacaatattataaaatgtgttttgtagaataattcaggtagtcctttttgcaatcatgaaaaataatactagacaatgaaagtggcgaagtaaaatcccctcaaaatgatttaagaatcaaatagtaaaattgaaaatactatacagtagcttttcgggaaaaaaaaaaaccagtgtcaagcgggcttcgaaggccaaataagagcttaattctaacttgctccatttaccaaatgaagcctctgtacaaaaaattctgaaagagacttggttgtttcctaagatttcttgatttttaaagtggctaaaccgtactattactatataaatggcatttatttcagttgtgtttttgtcctttgatcctttcacacttgttattcaccctgtttttttattattctttttttgcgagaaaagatgagatgcagaaatgcagaggtgtgcagtaacgcaggcgtccgcgtcgtgctcaccgactttcacaggagcaacagtacggacttcctgctcggtgggcccgctttcgcgggcctggccaagcccgggatggcccacaagttgaagaagcttgatgctctgtcagtagagtacagaaggtaggagtaatatctgtctggcatgttaattttcaagcctaattattgtttacttagagaaaatttgctgttcttaattatctggtaattcaatattttaaatcagatacatccaggcaaatattgaggagatttgtatgtattagaaaaggcagtggaaggccatttcgttaggtagacttggagttacttggagggatgatgtcccttagacgagtaaatatatactccgttttttccattggttagcttaaaattaaattaaccaacgtcaaatatataaggaaagtggtagtatctttttggaatttcataaatcatggtataggaaaatggttcatatggttttgaattcttaggtgttctcttttgaagtttattttcatattgaattttaaagctaacgatttaattttttttgaatttcatattaaattagatagatgcagatgtcacatatttatttaaatgaaatatgtagcttactccatgttactcttgaactcgaattctatacttaaatattcatcactggaaagtactaaggccctgtatgagatagctaagattgatgatatgatatttgtgataggtatttgagtgtataaaggaataaattaactactacatagttaaaaatagctttagaatattattccaacaaaactatatatataaaacttgcacaaaatgtattgtttaggagcttggaaaacgtacaaacgaaaatccaggatcagaaaagaataaccagattccaaacacgacaaattcatgtttactgatgtttacaacgataaccatttagatattacttggtcttggtccaaatgctaacatttatttatttaggctgaaatgttgtaaaagtgagactgaaagagatttttccaaatgcttcacaaggcaaagacacaactttattttcaacgagcctagagatacatacaaattaatggttagcactgcagtcctcttatatcttttcccttgtttccttgcagaattccctgcgactacaaggacaagaacctgtccatattagtagaagagcagagcaaaaggccaaacaatttggtcatcaagttcctttaccaaggtggccaaactgatatcttagcggtggatgttgctcaggtaaaatgaagacttgaatcaaacagaaataataacatgtatttttttcaatgaatttcttttttcatcttaattacaaacaactgaaacagaaagcgtctaataaacaatattgtggacttggtccatgcaggtgggatcatcggattggcggttcatgacccgggtctatggacccgtttggagcatcgaccgggcccccaacggaccgcttcagttccgggctgtggtgaccggtggttacgacgggaagtgggtctgggccgaccgggaggttcttcccgccaactggcagcccggccaggtgtacgacaccggtgcgaggatcgccgacgtggcgagggaaagctgcctagactgcgccacgctggactggaagtgaaaggtgtgctagacctgacgtatctggcactgcaaagaccaggtacatgtagatacagtcctcatagggtgaagggacagcgctggggttggaaaaaacagaggctccccttccctgtcaaaacaaagagatacaatgttttttatgggggatagctgtgatctccctgtttagccctttgatttggtctcttcttccaatatgcatgtgttcactgaaccatgcatatgcatatgagagatgtgtcatcaggatctgatgagatggtggtggtggtggtgggctcaggggaatgtaaacaaatgtaacctagctacccccatactaattgctagaataatgaacatagttccagtgttttgtccttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0475400, RefSeq:Os07g0475400