Os07g0477500

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0477500| Description = Conserved hypothetical protein| Version = NM_001066164.1 GI:115472060 GeneID:4343221| Length = 5892 bp| Definition ...")
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Gene Name

Os07g0477500

Description

Conserved hypothetical protein

Version

NM_001066164.1 GI:115472060 GeneID:4343221

Length

5892 bp

Definition

Oryza sativa Japonica Group Os07g0477500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17937778..17943669

Sequence Coding Region

17939209..17940515,17940647..17940654,17941050..17941225,17941559..17941619,17941692..17941790
,17941892..17941986,17942148..17942261,17942405..17942472,17942671..17942781
,17942893..17943127,17943223..17943333

Expression

GEO Profiles:Os07g0477500

Genome Context

<gbrowseImage1> name=NC_008400:17937778..17943669 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:17937778..17943669 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtggtgcacccaagaggtcgcatgaggagggtagtcactccacaccggcaaaacggccgttggatgacagcagcttgtactcaagcccttctgggaaaattattcaaccaggcagcagtgatttccatggttcgtttgaacatgatgggagatttgccaaagttcaacgtattgagccccgggatgataagaggccctctctggcacataggatgcctattggcccctccaactttgtggaccactcaatctcatctgatggcagattagaatcaaagcaaaataaagatccatgggacactaaggtagatgttcgggaggcaaaggctgacactcgagatgtctacagtgatcccagggttgaatttccgagcaataaagttgagactgatgtaaagacggacaatagagcagatgacaatgacataagagccgacagacggatacatgctgactacaaaggtgatgccaaactggacaaagatggtcatcctacagcaatttcaaacatagcctggaaagataacaaagaacataggggtaaaaggaatattgagcagccatctgataatgcagattggcgttttccccgccctggtttgcaaggaacagatgaatcttccaaaggtccagttcctgcagatgagcggtccaaggatgctcatgaatctactggtgagaataaaactgaacctaaaactgaagataagtttagagataaggacaggaaaaagaaggatgaaaagcatagggacttcggcacaagagacaatgatagaaatgatcgccgaattggtattcagcttggaggcaatagtgttgaacgaagagagaatcagagggaagatagggatgctgaaaagtgggatagggaaagaaaagattcccagaaggacaaggaaggcaatgatagagagaaggattctgcaaaggagtcatcagtagcaactgaaaaggagaatgcaatactggaaaaaactgcatctgatggagctgttaaaagtgccgagcatgagaataaaacagtagagcagaagacacttaaagatgatgcatggaaatcacatgatagggatcccaaggacaagaaaagagagaaggatatggatgcaggagaaaggcacgaccaaaggagtaaatataatgacaaggaatcagatgatacttgccctgaaggagatatagagaaggataaggaagcccttggaagtgtccaacgcaagagaatggcgcgatcaaggggtggtagtcaagcatcccaacgagaacctcgatttaggtctaggatgcgtgatggtgaaggatctcaaggtaaatctgaggcatcagccattgtctataaagctggtgagtgcatgcaagagcttctgaaatcatggaaagagtttgaagcaaccccagaagctaaaagtgctgaaagtgtgcaaaatggccccactcttgagatccgcatacccgcagagtttgttacgtccactaaccgtcaagtaaaaggtgctcaactttggggaacggatatttatacaaatgattcagatcttgtcgctgtgcttatgcatactggttactgctcccctacatcatcacctccaccatctgcaatccaagagctacgagcaactgttcgagttctaccgccacaagacagctatacttcaactttaaggaacaatgtccgctcacgtgcttggggtgctggtattggttgtagctttcgcatagaacgctgctgcattgttaagaaaggtggtggtactattgatcttgagcctcgcctaagccatacatcagctgtggagcctacacttgctccggttgcggttgagcgcacaatgacaacaagagcagcagcttctaatgcgttacgtcaacaaagatttgttcgggaagtcacaatacagtacaatctctgcaacgagccatggttgaaatacagcataagcattgtggcagacaagggattgaaaaagtcattatatacttctgcgaggctgaaaaaaggcgaagtcatatacttggaaacacattataataggtatgagctgtgcttcagtggagaaaaggctcgtcttgttggatcaagctccaatgcggcagacgcagaaactgagaaacaccagaatagtagccaccatcactcgcaaaatggggacagggcctcttcagaacatgaactgcgggatttgttccgatggtcccgctgtaagaaggcgatgcctgagagctctatgcgctccatcggtatcccgctgccagctgatcaacttgaggtgctgcaggataatttggaatgggaggatgtgcagtggtcgcagactggtgtttgggttgctggaaaggaatatcctctcgcccgagtgcatttcctatcatcaaactag</cdnaseq>

Protein Sequence

<aaseq>MSGAPKRSHEEGSHSTPAKRPLDDSSLYSSPSGKIIQPGSSDFH GSFEHDGRFAKVQRIEPRDDKRPSLAHRMPIGPSNFVDHSISSDGRLESKQNKDPWDT KVDVREAKADTRDVYSDPRVEFPSNKVETDVKTDNRADDNDIRADRRIHADYKGDAKL DKDGHPTAISNIAWKDNKEHRGKRNIEQPSDNADWRFPRPGLQGTDESSKGPVPADER SKDAHESTGENKTEPKTEDKFRDKDRKKKDEKHRDFGTRDNDRNDRRIGIQLGGNSVE RRENQREDRDAEKWDRERKDSQKDKEGNDREKDSAKESSVATEKENAILEKTASDGAV KSAEHENKTVEQKTLKDDAWKSHDRDPKDKKREKDMDAGERHDQRSKYNDKESDDTCP EGDIEKDKEALGSVQRKRMARSRGGSQASQREPRFRSRMRDGEGSQGKSEASAIVYKA GECMQELLKSWKEFEATPEAKSAESVQNGPTLEIRIPAEFVTSTNRQVKGAQLWGTDI YTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQDSYTSTLRNNVRSRAWG AGIGCSFRIERCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAASNALR QQRFVREVTIQYNLCNEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHYNRYE LCFSGEKARLVGSSSNAADAETEKHQNSSHHHSQNGDRASSEHELRDLFRWSRCKKAM PESSMRSIGIPLPADQLEVLQDNLEWEDVQWSQTGVWVAGKEYPLARVHFLSSN</aaseq>

Gene Sequence

<dnaseqindica>1432..2738#2870..2877#3273..3448#3782..3842#3915..4013#4115..4209#4371..4484#4628..4695#4894..5004#5116..5350#5446..5556#agtttttgcccttgatttgatcccccaattcattccatcccgcgaccgagctgggcgtcagcgccgtcgttcgtccctgctgcttccgccgtcgcatcccatcctcatcctccgccaccgccgcctgcgccgatccccatccatccatccacccagcgaccgaccgaccgagcagggtcgccgtcgttcgtacggctgcttcctcgccgcatccatccatccatccatcctggtgaggaaccacatcctctttcccatctctctctttacccacgcacttttttttctcgaatttgcgtcaaaccgcttctgttctagaaattttccctaacccttaacactaataacagtttgatggttcccaaaaaggtttggtttttctttttttttttttaaaaaaaagaggtttgggtttgggggttcaactgaagtgaacccccatgtcccatgttagatccgccactccttcgtttgaactagtgaaagctacgccattctcttgataaaaaaaatgaaattgggggtaaagaaatgatctttaattctgttgggtgccgattccaccctgttcctgttgtaccagtccggctggacaccgcaaaaatggcaagacatgatgtagctgagagaggagggtgctgggctggcatggaaattgacgagggggctgcacgtaatttgtttgagaatacattcaaatcattttttcatgacttatcttcctgtagaattgaacatttacaaacttgaagattttccctcattctgatggactacagtataacagtagcttagtcgataacagggagcttggtgcaatatacagctgaatcttgtttggtgaactaggaacagagtactgaggtcaatatggaatgcggtgtatcggttactccccaagggtgcttccagcccttaaaaaccatgcaaatagtgatgatagattatgtgaaaaagaacagtaagatagggcatgttggcatcttctacgccacaaattttcatatccaaactgcatcaagatgtcaagaaacaaaggagattctttttagcagaacaccttcctttttgtttcttgttgtttggattgaatttagattgacgttttgtggattgttagatgccaacatgctctttactactaaattgttccagattttttattactgcacatgaggttgtagggggttattttagatgtgcccataagcacccttaaatgttcttgttgttggtgaaataccttatacatcatgtcttactctaaattacacaatctggttatgtggaaaaaagaaagtaactgatgtgttctgacctaaattttcatttttttttggcagtgcattgtgtcaaaggcattgggctatatccttttgtatttgtgtttcttggttcatattgaaggactgttgacatttttgagggaaaatgagtggtgcacccaagaggtcgcatgaggagggtagtcactccacaccggcaaaacggccgttggatgacagcagcttgtactcaagcccttctgggaaaattattcaaccaggcagcagtgatttccatggttcgtttgaacatgatgggagatttgccaaagttcaacgtattgagccccgggatgataagaggccctctctggcacataggatgcctattggcccctccaactttgtggaccactcaatctcatctgatggcagattagaatcaaagcaaaataaagatccatgggacactaaggtagatgttcgggaggcaaaggctgacactcgagatgtctacagtgatcccagggttgaatttccgagcaataaagttgagactgatgtaaagacggacaatagagcagatgacaatgacataagagccgacagacggatacatgctgactacaaaggtgatgccaaactggacaaagatggtcatcctacagcaatttcaaacatagcctggaaagataacaaagaacataggggtaaaaggaatattgagcagccatctgataatgcagattggcgttttccccgccctggtttgcaaggaacagatgaatcttccaaaggtccagttcctgcagatgagcggtccaaggatgctcatgaatctactggtgagaataaaactgaacctaaaactgaagataagtttagagataaggacaggaaaaagaaggatgaaaagcatagggacttcggcacaagagacaatgatagaaatgatcgccgaattggtattcagcttggaggcaatagtgttgaacgaagagagaatcagagggaagatagggatgctgaaaagtgggatagggaaagaaaagattcccagaaggacaaggaaggcaatgatagagagaaggattctgcaaaggagtcatcagtagcaactgaaaaggagaatgcaatactggaaaaaactgcatctgatggagctgttaaaagtgccgagcatgagaataaaacagtagagcagaagacacttaaagatgatgcatggaaatcacatgatagggatcccaaggacaagaaaagagagaaggatatggatgcaggagaaaggcacgaccaaaggagtaaatataatgacaaggaatcagatgatacttgccctgaaggagatatagagaaggataaggaagcccttggaagtgtccaacgcaagagaatggcgcgatcaaggggtggtagtcaagcatcccaacgagaacctcgatttaggtctaggatgcgtgatggtgaagggtaagtttaacaatacatcttgctatgttttttcatcattgattcaaatgcataatgggtgcttcctgaccttgatttaacaggtaaaaacattatttatttgatatgtttctgtatttgttttcttgcagatctcaaggtcagtcaaatatcttgtactacagaagaataaaatggaatagggatagtgacatgtccttcaaaactgtcacggaaagctttccagcagacttataagtttgcattttcttctcagaatattttaatgctataaccaatccatttaaaattttgaaacccctttacatttctcacttttaggatgatattttttgttacactgcatgtgctagtgtgtgtgtctattttgtggacaaaatccagccagagaggataaatagggtaatcggggtgtatatttatgaggattccgttgcaactttcaaattgagcataatgataatttatctaaggtaggctggtaaggaagttgctgtttttgtattttgctatcttagtttcattccattgcaggtaaatctgaggcatcagccattgtctataaagctggtgagtgcatgcaagagcttctgaaatcatggaaagagtttgaagcaaccccagaagctaaaagtgctgaaagtgtgcaaaatggccccactcttgagatccgcatacccgcagagtttgttacgtccactaaccgtcaagtaagtgttgacttttacaggtggcatatgttaatcccttcatcaatctccaagtttgcattccagaatgttaatatattaacacacctaatactgaatgattgtgtaattcacttgcaagtgtgcatctgtagatttatatatttacaggagattattctattgtgatctctttgaaccagagatgtatattctatttatctttcctcttgaaaccatatatgccaattgctacatatttgctgctcatgtagttgacaaattgcttcataaattaatgaagctaattacttcctttgattttgtttgtttcttaaaatcactgttgtgtaggtaaaaggtgctcaactttggggaacggatatttatacaaatgattcagatcttgtcgctggtaagttcttgattattttccaagcgtgaaacgaacctctgaaagctgatttctaaacggtctttcttttagtgcttatgcatactggttactgctcccctacatcatcacctccaccatctgcaatccaagagctacgagcaactgttcgagttctaccgccacaagacagtaagccttcattctttgtcagtccaattattagacttaaaaaggtcagagcaatatggctaaattagtagtacttgtataacacttgatctaccttccaggctatacttcaactttaaggaacaatgtccgctcacgtgcttggggtgctggtattggttgtagctttcgcatagaacgctgctgcattgttaaggtattaagactgtataagataacatataaggctactgtgttctccttttgctttgagcaaaatttcagtgctttcttttgttttaatctgctgatgtaaaaaccttttattgaccactgctccatagattgtttgcttagtttgtattacatgctttgcagaaaggtggtggtactattgatcttgagcctcgcctaagccatacatcagctgtggagcctacacttgctccggttgcggttgagcgcacaatgacaacaagagcagcagcttctgtaattttctacctcctctttctgttatcaatgttttcatttcaaagacattttacttcactttgcaacatttagtttttgttatcatgagcaatctttgtctatattctgtactaaggtttttttcaatataatctatgcagaatgcgttacgtcaacaaagatttgttcgggaagtcacaatacagtacaatctctgcaacgagccatggtactttcttgacctaccttctgatgctactcatttgctcatgaaagttccatccagcacgtactgcagccttttctgttgcatatgagtgcttgtttgtttcagcgctcaactcctcagcttttagaagcctttgtctaggtctttgttgagctaaggttgctcctactaaccttgtacctgattactttacttcaggttgaaatacagcataagcattgtggcagacaagggattgaaaaagtcattatatacttctgcgaggctgaaaaaaggcgaagtcatatacttggaaacacattataataggtatgagctgttaccgttaactatttggccatcacctgaagttatatttttgacttctgtggagcacagttccttcatttccccccctcctgttactgcaagttttcacaggtatgagctgtgcttcagtggagaaaaggctcgtcttgttggatcaagctccaatgcggcagacgcagaaactgagaaacaccagaatagtagccaccatcactcgcaaaatggggacagggcctcttcagaacatgaactgcgggatttgttccgatggtcccgctgtaagaaggcgatgcctgagagctctatgcgctccatcggtatcccgctgccagctgatcaacttgaggtaacgtcctgctttctaacattaaaatggtggataattcgcatacagaaaccacaattctcacacggttttcttgttacctcgacgcaacgcaggtgctgcaggataatttggaatgggaggatgtgcagtggtcgcagactggtgtttgggttgctggaaaggaatatcctctcgcccgagtgcatttcctatcatcaaactagcccctgcaagtccttcaagttgtcgtagcagccggttcatgaactaatttctcgcaacaatttaaggcaggagcttctctttggtccatgtcgcggttttattgtacaatgtacaatgcatccatgccatgtctgtgtataaatcaagaatgctcagctgctgtaggctgtgttgtgtgtagtattttttcccccttttttcataaactatttgagttctagttgggctgcttctgccccatgtcactgagatgtagctgttgcttcacaatttagctaacctgatgattattgttgaatggttgatgtgctgtaacttaattcagtgctgtgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0477500, RefSeq:Os07g0477500