Os07g0479300

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0479300| Description = Peptidase S10, serine carboxypeptidase family protein| Version = NM_001066169.1 GI:115472070 GeneID:4343226| Length ...")
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Gene Name

Os07g0479300

Description

Peptidase S10, serine carboxypeptidase family protein

Version

NM_001066169.1 GI:115472070 GeneID:4343226

Length

3782 bp

Definition

Oryza sativa Japonica Group Os07g0479300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18070226..18074007

Sequence Coding Region

18070543..18070671,18070882..18071015,18071726..18071984,18072059..18072147,18072381..18072531
,18072626..18072769,18073095..18073214,18073332..18073506,18073579..18073952

Expression

GEO Profiles:Os07g0479300

Genome Context

<gbrowseImage1> name=NC_008400:18070226..18074007 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18070226..18074007 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcccacccgtcagtctcactccctcctcctcaccttcctcctcgtcggcgccgccgccgccgccgccgcggcctcgccggaggacgggagccccttcctccgcctccccaccgcctcggacctccccgtccccgccgggcagctcccccgctccgccgccgtcggcctcatccgcgccctcaacctccacccgcgcgacgcctccccctccccctccagccgcggtgatggcgacgtccccgccggaaccctagtcgagaggcccatccacctcgcctccatggccaccgggaagagcggcggctcgtcggctgaagacctcggccaccacgccgggtactaccgcctccccaacacccacgacgcaaggctgttctacttcttcttcgagtcgagggggagcaagggggaggacgaccccgtggtgatctggctgacggggggccccggctgcagcagcgagctcgcgctcttctacgagaacgggccgttccacatcgccgacaacatgtctctcgtctggaacgactttggctgggatcaggagtcgaatctgatatatgttgatcagcccacgggtactgggttcagctacagctccaatccgcgcgacacccgtcacgatgaagctggtgttagcaacgacctgtatgcctttcttcaggccttcttcactgagcacccgaattttgctaaaaatgatttctatattactggggaatcgtatgctggacactatattcctgcctttgcaagtcgagtgtacaaggggaacaagaacagtgagggcattcacatcaatttgaagggttttgctattggcaatgggttaacggatccagcaatacaatacaaggcatacactgattactcattggatatggggttaattacaaaatcacagtttaacaggattaacaaaattgttccaacttgtgaacttgctatcaagctctgtggtacctctggcactatatcttgccttggcgcatatgttgtctgcaatctaatattctcttccatcgagacaataattgggaagaaaaattattatgacatcaggaagccatgtgtggggagcctatgctatgacctctctaatatggagaagtttctccaattgaaatcagtcagagagagcctaggtgttggagacatacagtttgtatcatgcagcccaactgtatatcaggccatgctgctagattggatgaggaaccttgaagttggaatccctgaactccttgagaatgacatcaaagtgttgatttatgctggagagtatgatctcatatgcaactggttaggaaactcaagatgggtgaattctatggaatggtctggaaaggaggcttttgtgtcctcatctgaggaacctttcacagttgatggaaaagaagccggtattctgaaaagctatggacctttgagtttcttgaaggtccacgatgctggccacatggtaccaatggatcaaccgaaggtcgctctggagatgctgatgaggtggacctcaggaaacctttccaacgcatcctcgagcttccagaggctcgattttaccatgtga</cdnaseq>

Protein Sequence

<aaseq>MGPTRQSHSLLLTFLLVGAAAAAAAASPEDGSPFLRLPTASDLP VPAGQLPRSAAVGLIRALNLHPRDASPSPSSRGDGDVPAGTLVERPIHLASMATGKSG GSSAEDLGHHAGYYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELALF YENGPFHIADNMSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNPRDTRHDEAGVSNDL YAFLQAFFTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGNKNSEGIHINLKGFAIG NGLTDPAIQYKAYTDYSLDMGLITKSQFNRINKIVPTCELAIKLCGTSGTISCLGAYV VCNLIFSSIETIIGKKNYYDIRKPCVGSLCYDLSNMEKFLQLKSVRESLGVGDIQFVS CSPTVYQAMLLDWMRNLEVGIPELLENDIKVLIYAGEYDLICNWLGNSRWVNSMEWSG KEAFVSSSEEPFTVDGKEAGILKSYGPLSFLKVHDAGHMVPMDQPKVALEMLMRWTSG NLSNASSSFQRLDFTM</aaseq>

Gene Sequence

<dnaseqindica>3337..3465#2993..3126#2024..2282#1861..1949#1477..1627#1239..1382#794..913#502..676#56..429#atcagtttctctcactcccctcggttggttcgctcgctccccgggattatcagccatggggcccacccgtcagtctcactccctcctcctcaccttcctcctcgtcggcgccgccgccgccgccgccgcggcctcgccggaggacgggagccccttcctccgcctccccaccgcctcggacctccccgtccccgccgggcagctcccccgctccgccgccgtcggcctcatccgcgccctcaacctccacccgcgcgacgcctccccctccccctccagccgcggtgatggcgacgtccccgccggaaccctagtcgagaggcccatccacctcgcctccatggccaccgggaagagcggcggctcgtcggctgaagacctcggccaccacgccgggtactaccgcctccccaacacccacgacgcaaggtgacctcatctcatctcatccctcctccgacgagctcggtttcctcaactgcggctgactcgcgctcgcaggctgttctacttcttcttcgagtcgagggggagcaagggggaggacgaccccgtggtgatctggctgacggggggccccggctgcagcagcgagctcgcgctcttctacgagaacgggccgttccacatcgccgacaacatgtctctcgtctggaacgactttggctgggatcaggtacaccaaaccttctgataatcaatcataagctagtggtaattttgctatattgttacaatatgccatttgttttgttgattgttgagatcattgtgtaaaatttttcaattgcaggagtcgaatctgatatatgttgatcagcccacgggtactgggttcagctacagctccaatccgcgcgacacccgtcacgatgaagctggtgttagcaacgacctgtatgcctttcttcaggtaggaactcttattactataacatgatgcattcctaggtggaatgttcactgtacacatgcatcattatatatcatcttcgtgcattgaattactaaatttgttttgttatatatagcaaagttgtagcttgtaggacatcgacaaggcactactcacctgtttgaaccagaaatagcagtatccgtttatttgtgttgtgaggatataaataggcaagaaaatgaggcaaactacatagcaatgaactatatggaaaactgcctttttaatttctctttcataaagtaagctccttaaacttttctttccatcatgttgacaggccttcttcactgagcacccgaattttgctaaaaatgatttctatattactggggaatcgtatgctggacactatattcctgcctttgcaagtcgagtgtacaaggggaacaagaacagtgagggcattcacatcaatttgaaggttttgtttttctctctttctggaagtatcttaatggttctgccctatatgtgattacagtcatggtgaaaacctctctttcgtgattttccagggttttgctattggcaatgggttaacggatccagcaatacaatacaaggcatacactgattactcattggatatggggttaattacaaaatcacagtttaacaggattaacaaaattgttccaacttgtgaacttgctatcaagctctgtggtaagtcatggtttccttgttaaaaatctcccccatttttactaacatagcctcttggccttgcacagtaaaacataacctgaagcgttgttcagaaatgtagttagtatttttgcctgtatgttttgttatgacaatgttattttttttcccattttattcaaaaagctccaaggctacttctgattccttataacatgtatatcaatctcgctttctgttttatgatgtaggtacctctggcactatatcttgccttggcgcatatgttgtctgcaatctaatattctcttccatcgagacaataattgggaagaaaaatgtagggttaactacataactaattctttgtttccatgttaaacaacctaatctgtgttcatcgcttcctggcagtattatgacatcaggaagccatgtgtggggagcctatgctatgacctctctaatatggagaagtttctccaattgaaatcagtcagagagagcctaggtgttggagacatacagtttgtatcatgcagcccaactgtatatcaggccatgctgctagattggatgaggaaccttgaagttggaatccctgaactccttgagaatgacatcaaagtgttgatttatgctggagagtatgatctcatatgcaactggttaggtgagtatcttgctacttccttcatacatccataatatcaatgtttttttgacttgtagtctgcaatatgcaagccttttgtatatgagttgttttcctgtaatataacagcaaaagtagtaaagtttactttgttaagaagcattttgctgggtggcccaatggcaatatttccatctagtcattatatgcttttacatatattaaattaattttcaaagttctgaaagattgactgcatggatcccatggggacctatatttagagacagagagtagagatggcaagtatggagaaccctgtgctgtagtttatctgttgtgtcacaggttgtgacatcaaatcccactgtacaatgtcacttgcgctcctctgtgaatgggttctgtgaaacagatacattaagaaatttcacgatcttcattctccgcatttattatttttttatggaagtacaatgtggaaaacatgttgtaacaacacatttggcccattgtaggctgtctattagtctaataagaaacgatgataaaccttttattgtttagaatggcaaggtatattaacaatgtactccttccgtctcaaaacataacaacctagtaccagattagactgtactttcctaaattttgtctgtatttggttctcctaattctagctgttctctgccaatgtgtatgcataatcaatttcttgatttgagcaggaaactcaagatgggtgaattctatggaatggtctggaaaggaggcttttgtgtcctcatctgaggaacctttcacagttgatggaaaagaagccggtattctgaaaagctatggacctttgagtttcttgaaggtcagttctacaatccgtactgaaaatccctttataatactggacaaaaacacatgcaggcatacatgattacattgcttatagaaatgcattaaaacatagcaacaaaattataaaccagagacttgtagcgatttgcactcattatctttttcaaaagaaagaaatttggacgcactgccaaacttagtagagagattttgtgaacaggtccacgatgctggccacatggtaccaatggatcaaccgaaggtcgctctggagatgctgatgaggtggacctcaggaaacctttccaacgcatcctcgagcttccagaggctcgattttaccatgtgatatacacactctgtcctcttgtgacacgatcagaggaacatggtttccccataaattagtataaagtgcttagtaggcacgtcagaatgattttaggtgatgacaagctcactgctaccgtacagatgttatttcccttgtacggtgcttgagtcactgaagtatcggtgacgccactcgattgttagcatgtaataaagcttagaattgttatggacagaagccaatctctttgttatgagggctgtttatgtccaggtcttgtatgctattataatacttatggcttgtgctatggatggtataatctgtgctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0479300, RefSeq:Os07g0479300