Os09g0464000

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0464000| Description = Similar to Carbonate dehydratase-like protein| Version = NM_001069944.1 GI:115479630 GeneID:4347305| Length = 3903 b...")
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Gene Name

Os09g0464000

Description

Similar to Carbonate dehydratase-like protein

Version

NM_001069944.1 GI:115479630 GeneID:4347305

Length

3903 bp

Definition

Oryza sativa Japonica Group Os09g0464000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18221348..18225250

Sequence Coding Region

18221984..18222181,18223094..18223199,18223284..18223374,18223497..18223551,18223639..18223752
,18223842..18223890,18223966..18224127,18224822..18224874,18224967..18225059

Expression

GEO Profiles:Os09g0464000

Genome Context

<gbrowseImage1> name=NC_008402:18221348..18225250 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18221348..18225250 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctagtctgctccgccccgcctccccgtgcctcaacctcgcgccccccaccgccgacggccccggccggagccgctccgctgtgacgatcggtggttcgaggccgctcagcgtttccctgcgtgtgggaggatctagccggagggactttccgtgtaccacaatggcctcaagagatcattctggtttgactcgacagcttttagattttcaacatggtacagtagatgagatagatggggaacatgatccattcatggagttgaaagcaaggttcatggacttcaagcacaggaattgtgtggataatatttctaactatcaaaatcttgctcagcagcaaacaccaaagttcatggtggttgcttgtgctgattctagggtatgtccttcaagtgttttggggtttcagcccggggaagcatttactgtccgtaatatagcaaatttggtaccaccatatcagcatggtgcttcagagactagcgctgcactggagttcgctgtcaacacactagaggtagagaatgtattagtggtaggtcacagccgttgtggtggtatccaagcactaatgagtatgaaaagtaagcaagatgattcgcaatctagaagctttatcagagattgggtgtcaattgcaaagagtgcaaggttaagtacggaagcagcagctggaaatttgaattttgaattacagtgcaaacattgtgaaaaggaatcaattaatagctcactgttgaacttgttaacatacccttggatagagaaaagggtgaatgaaggaactttgagccttcatgggggctattacaattttattgattgcacattcgagaagtggaaattagtataccgccaagggttggaaggtggaagcaagtatgccataaagaataggactacctggtcttga</cdnaseq>

Protein Sequence

<aaseq>MAPSLLRPASPCLNLAPPTADGPGRSRSAVTIGGSRPLSVSLRV GGSSRRDFPCTTMASRDHSGLTRQLLDFQHGTVDEIDGEHDPFMELKARFMDFKHRNC VDNISNYQNLAQQQTPKFMVVACADSRVCPSSVLGFQPGEAFTVRNIANLVPPYQHGA SETSAALEFAVNTLEVENVLVVGHSRCGGIQALMSMKSKQDDSQSRSFIRDWVSIAKS ARLSTEAAAGNLNFELQCKHCEKESINSSLLNLLTYPWIEKRVNEGTLSLHGGYYNFI DCTFEKWKLVYRQGLEGGSKYAIKNRTTWS</aaseq>

Gene Sequence

<dnaseqindica>3070..3267#2052..2157#1877..1967#1700..1754#1499..1612#1361..1409#1124..1285#377..429#192..284#atcatttttctaaaaaagaaaatcgctgcctcgacctcggtttctccgtcgcatcgccgtcgtgctcgctgcctcgctctaccccgtaaaatcccccccggccgttgccgcgcgaagcttttccctcccacaaatgcccgagaccccgaccacgacgaccaccacccgcgcgagcaccgggacatcctcacatggctcctagtctgctccgccccgcctccccgtgcctcaacctcgcgccccccaccgccgacggccccggccggagccgctccgctgtgacggtgagctcgccgacccgcccgcccattttcttggctctgcggcttttcgtgattcgttttgttgattcgtggcttctgtgggggtgcgtcagatcggtggttcgaggccgctcagcgtttccctgcgtgtgggaggatctagccggtaagcccaggatcgatccaacccataatttttacggccttttgggacgactgattggatcatggaactatccgtcttatttgatcggtttttggtcccttttcctattcatgaaccaccagcggtctcccgcgaatctctgatctagtgcgcaagttagatgtttgaagaattgtctgaactaattgggtggatctgctaggccgttttgtttggccagcgtgcttgcttgatgtttttttgttaatttatatagccgctttctctgtgcccgtggctcaatgttgatggctctgctattccagcttccggggtggatgtgatgttgtggttgaggaaaggagattctagttcgggaattatatatctcagatgaactgggtaaaataaggcataattttgcagtggggtatccttccaattttaccatgcatttgtgatacttaggatgggtttgagcatgtaaactcttctaattggatctttgtgccttcagaactttttagtcctgtaaataaatcatttatctcctcctttattaatgaaaaagaggcagtcctcctgccctcttattcgaaaaaaaagaactttgtaatgtccccttatttaatttaatttgtctgaagaacaaaataatgaatactctgttgctgtattgtaatttgtaccagtaagatgaatttctcatctgcaggagggactttccgtgtaccacaatggcctcaagagatcattctggtttgactcgacagcttttagattttcaacatggtacagtagatgagatagatggggaacatgatccattcatggagttgaaagcaaggttcatggacttcaagcacaggaattgtgtgtaagtggatcatgcatcattgtaatctatctaactttttttgtttactgagtttgttgtgtttgtgacttatagggataatatttctaactatcaaaatcttgctcagcagcaaacaccaaaggtgaatgactatggtgctgttgcaaatttctttaatattaacattactgagttctttgggattgctcatttcctttttctggtgtgcagttcatggtggttgcttgtgctgattctagggtatgtccttcaagtgttttggggtttcagcccggggaagcatttactgtccgtaatatagcaaatttggtaccaccatatcaggtagttcaagtttagacaaatgaattattatttccaatataagttttaccatgcaagttttgacagtaaacaatgctattatgccagcatggtgcttcagagactagcgctgcactggagttcgctgtcaacacactagaggcaagaatattttgtgatatagtattgaagattatatttgaacgttttctatttttatcaactctagtgacatgagcatatacaatgaattctgaatcacccaatgacattcctttattcaggtagagaatgtattagtggtaggtcacagccgttgtggtggtatccaagcactaatgagtatgaaaagtaagcaagatgattcgcaatctaggtaaagttcttcccatcttttgcattacgtatccttttatttttcttttacatcatgcatatatggtgtttgtttcttgaacagaagctttatcagagattgggtgtcaattgcaaagagtgcaaggttaagtacggaagcagcagctggaaatttgaattttgaattacagtgcaaacattgtgaaaaggtgattttgattttcttagtttgatggataattgttactacctcagttcatttttactactttatatcctagaatatgtgctttaattttgtcgttagaaatatcttcataactagttcaatgcccatgctttgctatgggaacagaaaaacagcaagaatgtttaaactgcatctgaaataatgatgttataataatttttaaatcactgggaaactaaattttctggtgtatattagtaagattgaaagtaaaagtacaaaacacattgttctatagatagtaagtcagtgaacatttacctagttgggttcttgggttgcttagggaatggacaaaagtccccacctactcactatttggggtcctacatgacagtggttgatggcaatggcagactcaccaccaccactaccatctttcataatagtatatatagagtatagatatagatattgtaattccattattatatctgaacgtaaagttattagaagcaattgccaaagtcaaatcttgaagactgaaaaagaaaagaatattatgtagaaaactaaagaacggagatagtagaaaccttgatttttcaggggaaaaaacatgcatttggtagtgcagtttgttgcttcaatgatctttactagttcaaagagatgtcaaagtttcaaggggtaaactcgttactgatagcaggcttcttcttggttcagtttatgtattcaagtttctggaatagatttagcatacttcaacacatgctaaataacactgatttcctgtgtttgatttcttgaaatgtttggtaaagtttagtgcatgcaatagctgaacattgaattttgtatagctcttattgctgatttaaaatgaagctaccgtaatatctgacatgaatgaaatattttgttgcaggaatcaattaatagctcactgttgaacttgttaacatacccttggatagagaaaagggtgaatgaaggaactttgagccttcatgggggctattacaattttattgattgcacattcgagaagtggaaattagtataccgccaagggttggaaggtggaagcaagtatgccataaagaataggactacctggtcttgatcaagaggcattgcttacctgggtaaatttcactctgccccctgcagtttagcatggttttgctttgccactgtgctgtccattttcattgcactttgctccattgtggtattgacattctgcaagaacgagtcccagtatcaagtcactgttacggtgttgttggtaccattgattaacataacacttgacggccatacttggtcatgttgtatgttatcagcttcacagaggtacatgtggcactttaacagttatttgatacagtgactaggctgcagttgagcgaaaccacaatggagtgaagtgcaacagaaatgaacattatggcagcaaagtgaaagtttgtcaaactgccggggacaaagtgaattttgtccaaatatccctgtattattttctgcttagaagcatcatattaattcaataagctgcaaactcatattcataccaaaaacatgtacgatcttgccacatttggcaaattattgtgttgtatcatttatcgtgtaattgcaaaaataagatagagctttgtaatctggtgtgccgggcagctgctgtatcaatataataattctcaaatagttgaaacaatgttgtgtttaaagttcaatctttactgttcttttgtcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0464000, RefSeq:Os09g0464000