Os07g0481000

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0481000| Description = Similar to Pollen-specific kinase partner protein| Version = NM_001066175.1 GI:115472082 GeneID:4343232| Length = 10...")
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Gene Name

Os07g0481000

Description

Similar to Pollen-specific kinase partner protein

Version

NM_001066175.1 GI:115472082 GeneID:4343232

Length

10018 bp

Definition

Oryza sativa Japonica Group Os07g0481000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18158806..18168823

Sequence Coding Region

18160147..18160251,18160551..18160664,18160861..18160979,18161332..18161378,18161457..18161557
,18162379..18162466,18163165..18163273,18163801..18163957,18164506..18164577
,18165027..18165140,18165232..18165348

Expression

GEO Profiles:Os07g0481000

Genome Context

<gbrowseImage1> name=NC_008400:18158806..18168823 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18158806..18168823 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgcgcggcgaaggggctggtggcggagccgtgtgccggcgaggcccgccggcgctgcggcggttgcggcgccgtcgcctactgctcgcgcgcccaccagactgtgcattggggatttcataaagaagaatgcgcaaggctcgcagagcagatgagccgcatcgatatgctgaaacaatttccattcacgttctctgtggaatctcctgctccgaatcatacattccctagtctaagatgtttccttttggaatcattcaaacttcaccaaaaaggactctggaaatcagaatgcatatgtgatccagaggttacttcagtcaaggacttaagcaaaacaactgactggagtatgggaagcgccctctgcccatgcacagagcctgaacataatgtatccacacccctgacaagctggaaagactactataggtggagatcgcttcctttgcaatcacctgttgctgttttacttcactggccacttactttatatcattgcgttcaactatcgcacctccaaacctcaaaatatgatggccaagacactctatgtattcactatttaggacctgagaaagaactacatcagcttgcggtgtttggggaactacgtgcactatttccaggtgtccatatttacattgaacttgtgggaccagcagttccaaaatctagggatggagagcttgtaactatttcaaactatgcacattgttgtgatgagagctgcttttgtaaatcttccattggctccaaagatttaagttgcagtgcagtgacattcaaactacgaaaagggctgtatcatgagagatatagtgatattgtgaaggattcaaagcctcatctcattgttgccccaaatgctggtatagctgcatatcctagttggattccaactattgaaataattaggaaagttgggattcctgcaattttcacggacttctgtgaagaagctgcacatctagcttcgtcctgcattacctccataactggtcaacccctcagagtcccaattcaggtaaatcctttcaggcaaccggttgcagtggataatagtgcactatgcttaccatgctactccaactgctttgtttttgggatgcagaattgcaagtttgtatcaccatga</cdnaseq>

Protein Sequence

<aaseq>MECAAKGLVAEPCAGEARRRCGGCGAVAYCSRAHQTVHWGFHKE ECARLAEQMSRIDMLKQFPFTFSVESPAPNHTFPSLRCFLLESFKLHQKGLWKSECIC DPEVTSVKDLSKTTDWSMGSALCPCTEPEHNVSTPLTSWKDYYRWRSLPLQSPVAVLL HWPLTLYHCVQLSHLQTSKYDGQDTLCIHYLGPEKELHQLAVFGELRALFPGVHIYIE LVGPAVPKSRDGELVTISNYAHCCDESCFCKSSIGSKDLSCSAVTFKLRKGLYHERYS DIVKDSKPHLIVAPNAGIAAYPSWIPTIEIIRKVGIPAIFTDFCEEAAHLASSCITSI TGQPLRVPIQVNPFRQPVAVDNSALCLPCYSNCFVFGMQNCKFVSP</aaseq>

Gene Sequence

<dnaseqindica>1342..1446#1746..1859#2056..2174#2527..2573#2652..2752#3574..3661#4360..4468#4996..5152#5701..5772#6222..6335#6427..6543#tcaaaaaaattccatcctcgtccttatcctcacctccacctccctccctcctttcttctcctctcacaggcgcgactcggcatcccgcgagcgacggtgggaggagcggggcctcgaccgccctgctgccgtcgccgccgccgacgaggtggccgggatccgatagcgcgacgcctctccgctgttcagatccgacggcagcccccctctgccgccctccgtagcccggatccggcagcgccgcccctcttccgccctcccccacgcgacggcggcggcgacgacgaggaggtggccgggatccggcagcgcggcgtctctcggccgcccgtatccggcggcggcgcggcgcctctccgctgctcggatttttatttttgtgtgtgggcaacataaccaccccggacgctaaaatgtgattttcgtgtgcgggtacaaaaattacgatttttctagaccccttagtgtatttaaattacgattttcctagaccccttagtgcatttagagattcatttgtaaaaaagtttttattctgagaagaacattcaaatattggattgaaatttcatgatttcgagcggaaagtttatgaatcttttgaatttatttggaatttcatatgtacaaagttccttcgcaaaagtttctacatttgaaaatttacgtggataaagtttctgcgtgtttttgtgcacaaagcttctacattcacaaaattacatagatcgataaagtttttgcactagaaatttattattactccgaatccgatattcgcgtgcacgtgttcacgcgtgaggattctcggacagttcgggacccacacagccacactccaaaccgcacaggcccagtttgggcccaaaagaacaatcccttccttgagacgtcaccgaactttgggctctatgggcctaacgagctccactgggcccaaatcacaaatgggcccatttcctcccactccataatttttttcatttttaaatttttattttttaatatttacataaatattataacatctaaaatatttacagaaatgacccctgccgcctatgtggagttttgccgccctctgcaagggctgtaagggggcaaatgcaattatcgtcctgccaaaaatacatttttatagtttttcttttcatcttgttcgtccctcatgccaggtctacttctgtaaaatattttcgtcgtaacaatatttctttctgtaaatattaaaaaaaattaaaaatgaaaaaattccccactctagggaacgccgagactgagaacgccccctttcctttccccctcctctcgttggaggcggccggggaagctggtgggcatatggagtgcgcggcgaaggggctggtggcggagccgtgtgccggcgaggcccgccggcgctgcggcggttgcggcgccgtcgcctactgctcgcgcgcccaccaggtagcgcccggtgaaaactttctaccttttctgcccccccgttaaatccgtccagctgttgccgttctagggagggtttcgaatggcgggcgtatgcgtatgcctcgaccaaatctgtgtttcgtaagtaaggatttctgttgggatttcctggaatcccggtaggtgagagtatcctaacgttgtgggtgaagctttgagtttaatctgaaaattttaaggaggagttatttgtattttacatatattttctttgcaactgtgtagctatgtgtaactttgaaacctacaatttgcagactgtgcattggggatttcataaagaagaatgcgcaaggctcgcagagcagatgagccgcatcgatatgctgaaacaatttccattcacgttctctgtggaatctcctgctccggtacttgactcattgtgatctccatttttttttttgcatctgaagttctctccgtgcatctaaagttatttttccccctctgtcataaaattgtttctacctatgcttcctgaaatgatttggttaccccttgtgaaccttgttttgtcccttagtagtattatgtagctctctctcacacttactgttcttacagaatcatacattccctagtctaagatgtttccttttggaatcattcaaacttcaccaaaaaggactctggaaatcagaatgcatatgtgatccagaggttacttcagtcaaggacttaaggtttgcttttgccctgagatctcatgatcccagctaccagccaactcgttaattctataacactagtatatttgctcgtgcgttgtaacagatctcaaataaatatgccataagttctaggcttacacaaatgcataatagttacccccacttttaaagcattcgcatcagattgacctatgaccatatatttgtatgctctaagaactcaaacctctggaaaactatacggttaatgatatcaatgtcttgttgtgtattatacaaactaccaggctttatgtcctttaatttttacctaattttagtctcagctaattttacttttatgctctttctgcatattatacagcaaaacaactgactggagtatgggaagcgccctctgcccatgcacaggtggatatctcattgtaatgaggtggttggcactattttcatttcatggctcctaaaagcatttgattttgtgtacagagcctgaacataatgtatccacacccctgacaagctggaaagactactataggtggagatcgcttcctttgcaatcacctgttgctgttttacttcactgggtatgcacaccacaccaagttttgagaaatattttgttgtacgatcgtagatatacgattctcttgtttgtttttgacgaaaatatgattctcttgtcaatccagaccaaaggttcgaattcatttagacaggtgcaccaagaaataatcgtgttacttatgctatggaaggacagaatgaaaacaagatgcaagcttgtattgtcagtatcaataaaaaagagaatgataatttgttcattatctactttgggtgatgcggtcattggtttttataatttgacatacttcaaatttactgattgatttcattattttgcaaatacatccaagcatgctgtgcttgtgcttgctatattgcctatatatgcaatcttctgcttaaaaaaaaacagttggctactacacttcctgtacgtgggatgttttccttaaaatatttaattgaagcaaatgtcagcttggcagaatttgcgttattaaaaatatggtgatgtttcctatcatgtcttcagtcttatatctacattactagctatttctttgaaaacttcggcaaagaaccagtttactgaagcattctttccagtttacattcctggtcctcttttgttgagaaaatcgccttgatttcctttgtagattcctcttgaccatgtctcttaatatgctgtatactgcatttatagctcatatcatacatgttgaggttatgaatgtgtattgtgcattactgattattttgaaaggagcatcactttttttactaatatctgtttacaccaatgactagtatatttatcgcacttccaattttgcagccacttactttatatcattgcgttcaactatcgcacctccaaacctcaaaatatgatggccaagacactctatgtattcactatttaggtaaagtatattgtgcaactctcttctctgttgaagtacttatatacatatgtaggaatccttttctagtcagtcggtcatttgctgccatcatggttttgggctgaactatttttcgagttttaagattattattatatgccacaactattgagggcaattaactttctggcaaaattcttgtaagtgttatgtcacttgaacgcgcatttcacacaaagtaaagccgcttgtttgtgcccactgaatactactggacacaagccagttcttggatttgctcgatgcaattgtgtctaattgcctatacatagttttggctggcacaatgctcagggtcattatcagtaaatgtatgagcacagatatcaatcattgactagtaaacagtctggtgtgcactgtgcagttcaggacactagtcttgtctatctgcactcatgtatttgttgttagaatgcttcctgttgagcttccttagtctgttattatggagatcacatgaagcattgatagctctaggtactgtcacatgagaggttttgtcttccattgttatagaacaagaggaattaattcagatgtactcttggaggcccgtgtacatttatagttgtatgttttattgattaagattgcagggaattaactaatgatgtttcttcttcatgcctatttctctaattaaatgtctgaaggacctgagaaagaactacatcagcttgcggtgtttggggaactacgtgcactatttccaggtgtccatatttacattgaacttgtgggaccagcagttccaaaatctaggttagcaacagacgctgtttttcccctccagtgtttcatgaaaaatttttcaattgttttttatttcctggtgttcgctcacaatttgactggtttacctttttcatttcatcagatcttatacctttgtatcagttagttaaataaaaaaacaaatctaggttgtttttactgctgcactagtaggcatattttggtgacttactacatctattgtcaaacagatgacgttctagaatgtgtgtagtcaaaatttgaaatcttaaatcattaatagatgcaaaaatctcaggatttgctatgtgaaaatgatattagtagatttgtcatgaaaagcactttcatatattttaataattttataaatatataatcagaaaaagtaatgatagttaaaaataatgaaggtagtatttattactgtgatcctggttgaacatggttgtacatgttccattatctgttaaaaatgtatagttggttatgtattcttgctttcctgattttgatattataccggcttacagggatggagagcttgtaactatttcaaactatgcacattgttgtgatgagagctgcttttgtaaatcttccattggctccaaagatttaagttgcagtgcagtgacattcaaactacgaaaagggctgtatcatgagagatatagtgatattgtgaaggttctatgcacagtaactctttacttatttataatgtgaagctacccatcatatgtgtatcaagcctttttttatttgaatgtgaagtgttttttataatgtgaaactataaactttcctacttgctacatgcaatctgtcattttgtaatacccaattccgtgtgacaagggtatttgcgtgtattccctctcacaaatccaactaactaggtttagagctactaggcttcttaatattacttgatcatgtcatttgtagcttgaatttcttaatcttctgttcagtgttttcggaaatacttactggaatgttagttgttatgtactagaagtttcattgatgccatatatgatgcactaaatcacaaagagaaattggcatttaattctattggcatgtgtattgtggtcagggaatactagaagctttgacttttgtactgaatatatataattagcccaccaagccaattcatttgggaattaatgatcgagttattttcattcaggattgactttctctgctaatactttgtttcttggtaggattcaaagcctcatctcattgttgccccaaatgctggtatagctgcatatcctagttggattccaactattgtaagtataaatgttcttgattagcaacctcctcccattttggatatgagcatgattggctatgaatttccttgtgatactaccactcttaacttcacaaagttgacattgttccagctagtttcatgctaaagcatacatctggaacttaaagtgtattcttcacaaatcgcaaatcatccctttatctcagttgatgatattcaagtaaaaatcgatgcgtttaattggtcatcttttcttctctaacccagacaattttcaacagacatgttatctatggaagaaagtgttagcattatattgtcctcatgtgaacttaaattaaaaatacaccacactatgacagctttaactgatgattgccagtataacacagtatactctatgtcttagcttgtaacagacttccattttttgtgctcattctattcaattttcatttgaaggaaataattaggaaagttgggattcctgcaattttcacggacttctgtgaagaagctgcacatctagcttcgtcctgcattacctccataactggtcaacccctcagagtcccagtatgtgttctgtttttccatcgtttcctttctgattgtagttatggagtatcaaactaataccatcatcatctatcatctcctctctcagattcaggtaaatcctttcaggcaaccggttgcagtggataatagtgcactatgcttaccatgctactccaactgctttgtttttgggatgcagaattgcaagtttgtatcaccatgaaatgttcagagattcaactcttaacaaataatatcactaactttttcaaagaaggcaaggataccatgaaatattttcatggacgaaattgccacctgtttttattatttagtctttcagaatagatgccttggttacttgtaagaatgtaagatgcactcatcagctcatgcttgtaaatacagttgtcgtataattgtagacctgtagtaacttgtaagatactacatatataataccctaaagttgcagaaagacttgctagtaggtagtagcaatcccatgctggacatggtgaaatatggatcagttatcaacagcttttgtgccaaggtactaatgaggtagtgccgaagaagcttgttggagacaaactttctgcaatagtaccattcatatggtgagttttctgcttttcatctaattcagtacctttagttatctaaatgtccctatcactgcatttcattttaaaactgacgctttcaaatttcttgtggatgagaagtttagatctaactttgattcataaatagaatgaccagcgttaacattttttttgtctatgagaatcatttcttgctattcttgttccaaattttggaaatattcccaatataaagtaaggttcttatggttttaatgataaaacggttaagttttttggtctcatcttgcaaacttttcttctcatccacataaaatctgcatatatgatgaagcagtcataaatccaattacacacactgcctcatataaaaaaactagcattgcacacgccactgcagtgaacacactgttgcatatccaaaactaaaattccacacgccactgcagtgaagtaaggagtccaatcacagagaatcctatattacaaaaggataaactcattttctatgttagttcatcatgttcagtactgttgaggagaaagcttgctgaactcctgcttctgcattctgatgttatgccctttcctggcattcccatctgcaatgagaacatcatctatccatgagacaatattgtaggctaaactttccagcaccctcgagtagctttcaagtattgcctgcccaatgtcctgtagcaaagtaaaatggagacacgccagcattagcaatgatgaacattctttgatccaaaggagatggctcaatcagttatttcgtatatgtttgtatgtttataccatgtatgatagttctaaatattttgtattagcattcagtatacttctgtctcttaaattgtagaataaacacacagtacacttttatgtttttgcttccaacattaatcatatctggtgtaaggaaaatacagatgaactctgagataatctgaaatttgggtatttcttatgtataagcattaccttgttgtactgaatcttgcttgtgtccagggtagtctgtgacaagcctggaaacctctgcttcaagcacaacaacaaactcctagccctacttgcaaggatcagattcttgtccccatcagcattcagctcagtaacattttcccattttgacaccacatgggtcatgcttgcttttctccgccatacgtacatcgcagcctcaacacggtctgcaatctcaagtgcctcatgttctgagctcaagttgaggaagttgaggaggtggtctggtgagaactgatcccctgcagacatgtaccggtatatggcatcacccacgccaaccttcccactctgttgagtagcagaaatgcatttatcagggggaaatgataatttcagtaatcaggaccatagaaagacccagatcaagcagtttctctgtacctttggcagtgtttctatgtatgacagtggaacctgcatttcagagaggatgccgctgttgatctccatggccatcttgtggatttggcttgcttggtccctcttttgttgcagctcacggtgcatccgatcagacaggcctgactctgggacacatggttcagggagccaccacttgtcctcgctgcgctgaaacttcatgctgtcactgaaggactgctttctctgatctatgtaccagaaatctgtcttctcaaagctatccaatatttcctgcaaaaatggtgtgcaattattggtcatacattgtactacaaaagttgttcgaaaggagccttccggaattccgcaaatcgggactttaccaggagcatagtttccagtttttcaagtgctggaaggttcattagtatgtctgatcttggtgaggttgccatcacctgtagaaaacagaaatttgtgcctaagtagacatgccatgaagatgaaacttatcagagtgtgagacgtgatattcttgcaatggaattacatcatgagtgcttccatctggcatggcctggacttttggtgagaattcaacaatgtattcgcagatggagaggaggcagtccatctccctgttccacatcgccttcttctcaggaggcagtggctgcaacctgtggcaggttccaaacacagttgctgcagccaagaacaagcacagaggtcaacccactgttgcctgcatcaaagaccaacttaacagaagattcatctgcaattctcagaactaccatatagattggtgatggcattggagatggccacagccgtgcagacacccttcccactcccagacatgtcctctccaagaagcagcttggtgtacttctccttcatcagctccatctctgaacaacacccatcaatcaaccaccagaaacaccagaggacactaccagaaatcaaaacaggttggcatatctataccttcatcctccagggacttctcgttcacaacttgctgcagcttcttcatgctgagcttgctcaccgatggcgagaggcgtggtgccgtggacgtcgtgcggctcatgcttctccctcgtggcggcgatggcgtatagtgctcctgctcctcgccaccgccattgtcggagaacgacgacacacggaacagcggtcgcgcgtagtcgcgatcgtagccgtgtttgtggaagccagggaagcctgaacctccactcatggttgcagctgttcttgctgcctgcttctgaagacctgcaagaaagacgatgaatgggaatggcacaagaatggaggcatgccaagaacagagaggataggtacctggtgttattgacttgctttcccttttttggtgatcatgtcatggctgtcacttacaagtgtatggaacaataataaaggcataggggctatctttccttgacatgggctgttgcaatcaatatggtttgcaattatgcaggcatgtgagcgatttgcccccacagtgtaggacaataaggttggattggttggatgtcttgcaggtttggtgaatgtgttaactgtcaggaaggtacaaaattttggcacttggtgctgtcacattgtacccagattttgactcacattttcggtgaccatctatttcttcaatttaagtaattgcctctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0481000, RefSeq:Os07g0481000