Os07g0483500

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0483500| Description = Similar to Phosphoribosyltransferase (Fragment)| Version = NM_001066182.1 GI:115472096 GeneID:4343239| Length = 5346...")
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Gene Name

Os07g0483500

Description

Similar to Phosphoribosyltransferase (Fragment)

Version

NM_001066182.1 GI:115472096 GeneID:4343239

Length

5346 bp

Definition

Oryza sativa Japonica Group Os07g0483500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18347309..18352654

Sequence Coding Region

18347490..18350525

Expression

GEO Profiles:Os07g0483500

Genome Context

<gbrowseImage1> name=NC_008400:18347309..18352654 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18347309..18352654 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagcaatcttaagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgcaacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagggatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctcactgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaattccaagacttgccttggcaaggttcggatctccggtacatcctttgtcagccactcagatgccacacctcttcactaccccctggagaagcgcacgatcttatcccgtgctcgtggtgagctcggtctcagggtgttccttacagatgatccatcagtcagagtgtccgctcctggtcaggagttcgacttcataagcacgcctacgactgcccaagagcaggtagccgccaatgccattccaaatcctttccaggagaccagagcagatcaagtgaggcaattccaacacttaccaaaagaacagcaccagcaccgtccgcagccaatgactgcgcagccatactaccctgaaagttcatacggacaacagcaacagaaaacctactctgctgtcgggaacaaagctgaaggtcctccacctccagtcatgaggatgtatgctcaaggtccacagcagcagcctgtagaattccagctgaaggaaacaagcccaacacttggtggcggacgtgttattggcggccgggtgatccccggtgaaaaggcaggggcatacgaccttgttgagaagatgcagtacctatttgtgcgtgtggttaaggcccgtgatctgccccacatggacatcactgggagtcttgatccttatgttgaggtgcacctcggaaactacaaaatgaagacaaggcactttgagaagaaccagaggcctgagtgggatgaggtgtttgctttccctagggaagtaatgcagtcaacgtcacttgaagttattgtgaaggataaggacttcattcgggatgattatgttggccgggtgtcaatagatctaaatgaggtaccactaagggtccctcctgacagcccattggcaccagagtggtatcgacttgtggggaaggaagggcacagggataaaggggagctgatgctcgctgtctggtatggaactcaagcagatgagtgcttcccaagtgccatccacgcaggatcagaaccaattgattcccatcttcacaactacatccgtgggaaggtctaccctgtacccagaatgtggtatgtgagggtcaatgtaattggggcacaggatatatttccaatggagaaccacatacctgatgtatttgttaaggtgaggctgggccaccaaatgctgaagacaaggccagctcgctcaccaaccagaaacttcatgtggaatgaggagatgatgtttgtcgcggcagagcctttcgaggaggacttgatcatacaaatagaggatcgagttgctcagaacaaggatgaagtgattggtgaaactatgatacctctcgcaaggcttccaaggagggctgaccataagccagtgctgccagcatggtttgatctcagaaggccaggactgattgatctgaaccaactaaaggaagataaattctatgcaaaggtgcaacttcgtatttgccttgaaggtggttaccatgtgctcgatgagtccacacagtactgtagcgatctccggccaacaatgaagcagctgtggaaaccaccaatcggtctgcttgaagttggcattctaagtgcaaatgggctcaatccaacaaagaccaagcatgagcgggggtcatgcgatgcatattgtgttgccaagtatggtcagaaatgggtgcggacacgtactattgttgacaacttgaaccctagattcaatgaacagtacacatgggatgtcttcgaccatggaacagtgctcaccattggtttatttgacaactgccacatatctgcagacagcaaccacagtagttcccccggccatatggacaagcccatcgggaaagtgcgaattcggctttcaactcttgagactgggagggtgtacacacacacgtatccattacttgtcctccacccatcaggagttaagaaaatgggagaactccacctggccatcaggttcacagccacatcccttctcaatgtgctcttcacatattctcggcccctcttgcccaagatgcattacgcgcaaccactgtcaatagtgcagcaggaaatgctccgccaccaagctgtgcaacttgtcgcacagcgtctagggcgcatggagccaccagttcgcagggaagttgttgagttcatgtcagatgcccgctcacacctgtggagcatgcggcgaagcaaggctaacttcttccgtcttatgcaagtcttctccggattcattgctgcaggaaagtggtttggcgacgtttgtcagtggaaaaacccagtcacaacagttttagttcatgtgctatttatcatgcttgtcttctacccagaccttatcctcccaacaatcttcctctacatgttcttgataggattgtggaattaccggttccggccgcgtttcccacctcatatgaacacaaggatatctcatgccgatatgacaaacccagatgagcttgatgaagaatttgatacattcccaacatcaaagagtccagatctggttaggatgaggtatgacaggctacggcatgttgctgggaggatacagacagttgttggggacattgcaactcaaggagagaggctgcagtcgctgctcagctggagggatccaagggcaacatctatgttcctattgttttgcctgcttactgcagttatcttgtatgtgacaccattccaagtgattgcactctgccttggtttcttctggatgaggcacccacggtttcgtcataaggttccatcggcacctgtgaacttcttcaggaggctacctgcaaagacagattctttgctataa</cdnaseq>

Protein Sequence

<aaseq>MMSNLKLGVEVTSAHDLLPKEQGTCNPYVEIEFDDQKFRTAIKE RDINPVWNEQFYFNISDPSRLTEKDLEAYVYHANRASNSKTCLGKVRISGTSFVSHSD ATPLHYPLEKRTILSRARGELGLRVFLTDDPSVRVSAPGQEFDFISTPTTAQEQVAAN AIPNPFQETRADQVRQFQHLPKEQHQHRPQPMTAQPYYPESSYGQQQQKTYSAVGNKA EGPPPPVMRMYAQGPQQQPVEFQLKETSPTLGGGRVIGGRVIPGEKAGAYDLVEKMQY LFVRVVKARDLPHMDITGSLDPYVEVHLGNYKMKTRHFEKNQRPEWDEVFAFPREVMQ STSLEVIVKDKDFIRDDYVGRVSIDLNEVPLRVPPDSPLAPEWYRLVGKEGHRDKGEL MLAVWYGTQADECFPSAIHAGSEPIDSHLHNYIRGKVYPVPRMWYVRVNVIGAQDIFP MENHIPDVFVKVRLGHQMLKTRPARSPTRNFMWNEEMMFVAAEPFEEDLIIQIEDRVA QNKDEVIGETMIPLARLPRRADHKPVLPAWFDLRRPGLIDLNQLKEDKFYAKVQLRIC LEGGYHVLDESTQYCSDLRPTMKQLWKPPIGLLEVGILSANGLNPTKTKHERGSCDAY CVAKYGQKWVRTRTIVDNLNPRFNEQYTWDVFDHGTVLTIGLFDNCHISADSNHSSSP GHMDKPIGKVRIRLSTLETGRVYTHTYPLLVLHPSGVKKMGELHLAIRFTATSLLNVL FTYSRPLLPKMHYAQPLSIVQQEMLRHQAVQLVAQRLGRMEPPVRREVVEFMSDARSH LWSMRRSKANFFRLMQVFSGFIAAGKWFGDVCQWKNPVTTVLVHVLFIMLVFYPDLIL PTIFLYMFLIGLWNYRFRPRFPPHMNTRISHADMTNPDELDEEFDTFPTSKSPDLVRM RYDRLRHVAGRIQTVVGDIATQGERLQSLLSWRDPRATSMFLLFCLLTAVILYVTPFQ VIALCLGFFWMRHPRFRHKVPSAPVNFFRRLPAKTDSLL</aaseq>

Gene Sequence

<dnaseqindica>2130..5165#gtcttcggggtcgtcgtcttcttcttcctcctctcgctagctacctgccgttttcatttccctaccatacgttggggttttctccggctgctcctccgtgtggccagttgtcctcatcttcctcctcctctctccttgttgccgcgaagaggatagataacccatagtcccgtacgcttctctttctctctctctctctctctctttcctctccactttgaatcaatcaaaacggagaagaagaagaagaagaagaagaagaagaagaagaagacatcaagaacacgtggagcagaagcttctctgccggcttctatcgtagctctcaaggttaccaccctccctgctgacacctctgcatgttttgctttgctctgaatattccggatttgctttagttcttttctagagtccgtcttgtgcttctgcgtggctgatttagtctgtttttgggtgaatttaatcatattctgtttttgtacccgagagaagttttggtatgtttgtcttggctttttcttcacccccctcttttgttttgaaatttgtattagttatttttgttgaacggatgaaagttattagttaggtaactaggtaagggaggaagaattcttagattgtttactatgagggctgcagatttgtttatggtactctgagttgaggaagggagatgaaatttcagttcctataaaaccgtccaaagttcaaccaaggaggcacaaaaatgtgaaaacagatcctattttctctgttgagatctccaatttaatttcatttggtccttgctccatctatttaatgaagtgcctgaacttcctagagaatagagactatcacatgaataaacatgattttgatatctgatgtatgtatggatggatgcaacatcatggagcacttcacttaactccaatggtgacaccctcccccatctcttagccatcacctgccaaccttttccaataaaggtgcaagaaatggtccatgctccatggtgtccatccatcaaagtttctcttacttttttttctccattctgagctcatgcccatttgtgcttttaattgaacaattcaaatgctacctttcagacctgagaatcctgtttcttcatttatgtcatctgaccacatatcactgttaatcaaagcgttttccaggaagctaattaggctgtagtaatagtaaacaggcatcgtattcataccggcttatgcttcttattttcttgttttaataaaaattgatgtttctgttatgttataataatatttttgatcaattgtttatgtggttacaatggatgtcccaatcagaaaagagggtggccggtggcctctcactttccctacccctcacatctggtctaccaaatgctgctgagggtttacttgtaacttattatttcagcacattttatacgcatgcatgcagctatctgtggattgaatttaatatgtgtttagagtctaaatgttgattgatgactatgtgtgcatcaacatgtcatcatctgggtataattgaattttttaaagatacttctattgtagtaaagatacttgtaggatgtaattaatagagatttcaagcgtacacgtatgtagcaaccctccaaagatttgaaattgaggcagaatactcctatcatgatagatagcttccatctgtaaagatgtaaattccagacagggagttaaaaactgatatccagctgatgtgaatacaaagatctgcagaaaggagacatactttttcttctttatcctttcatgttgttgtcaacacttttcttgttgaacattctgtgcgggatatgcttcaaacaacctgatgattcctactaccaatcttatgattccttgggaaaaagtaaatcttgtgggcattcgatatcccaacaaaactttcccaaccaactttagctggcacaactttcttctgcaataaccttcttttgttttttcatctcttgttgcaaccaagaacatttgtcaaagtggtagttacgctgccagctacctctctggtttcagcaatggcaggtttctaaatacatgttcttgttctaatttcaggataaagaaaatctgctgcagaggtacaagatctagtggcagaacatgatgagcaatcttaagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgcaacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagggatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctcactgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaattccaagacttgccttggcaaggttcggatctccggtacatcctttgtcagccactcagatgccacacctcttcactaccccctggagaagcgcacgatcttatcccgtgctcgtggtgagctcggtctcagggtgttccttacagatgatccatcagtcagagtgtccgctcctggtcaggagttcgacttcataagcacgcctacgactgcccaagagcaggtagccgccaatgccattccaaatcctttccaggagaccagagcagatcaagtgaggcaattccaacacttaccaaaagaacagcaccagcaccgtccgcagccaatgactgcgcagccatactaccctgaaagttcatacggacaacagcaacagaaaacctactctgctgtcgggaacaaagctgaaggtcctccacctccagtcatgaggatgtatgctcaaggtccacagcagcagcctgtagaattccagctgaaggaaacaagcccaacacttggtggcggacgtgttattggcggccgggtgatccccggtgaaaaggcaggggcatacgaccttgttgagaagatgcagtacctatttgtgcgtgtggttaaggcccgtgatctgccccacatggacatcactgggagtcttgatccttatgttgaggtgcacctcggaaactacaaaatgaagacaaggcactttgagaagaaccagaggcctgagtgggatgaggtgtttgctttccctagggaagtaatgcagtcaacgtcacttgaagttattgtgaaggataaggacttcattcgggatgattatgttggccgggtgtcaatagatctaaatgaggtaccactaagggtccctcctgacagcccattggcaccagagtggtatcgacttgtggggaaggaagggcacagggataaaggggagctgatgctcgctgtctggtatggaactcaagcagatgagtgcttcccaagtgccatccacgcaggatcagaaccaattgattcccatcttcacaactacatccgtgggaaggtctaccctgtacccagaatgtggtatgtgagggtcaatgtaattggggcacaggatatatttccaatggagaaccacatacctgatgtatttgttaaggtgaggctgggccaccaaatgctgaagacaaggccagctcgctcaccaaccagaaacttcatgtggaatgaggagatgatgtttgtcgcggcagagcctttcgaggaggacttgatcatacaaatagaggatcgagttgctcagaacaaggatgaagtgattggtgaaactatgatacctctcgcaaggcttccaaggagggctgaccataagccagtgctgccagcatggtttgatctcagaaggccaggactgattgatctgaaccaactaaaggaagataaattctatgcaaaggtgcaacttcgtatttgccttgaaggtggttaccatgtgctcgatgagtccacacagtactgtagcgatctccggccaacaatgaagcagctgtggaaaccaccaatcggtctgcttgaagttggcattctaagtgcaaatgggctcaatccaacaaagaccaagcatgagcgggggtcatgcgatgcatattgtgttgccaagtatggtcagaaatgggtgcggacacgtactattgttgacaacttgaaccctagattcaatgaacagtacacatgggatgtcttcgaccatggaacagtgctcaccattggtttatttgacaactgccacatatctgcagacagcaaccacagtagttcccccggccatatggacaagcccatcgggaaagtgcgaattcggctttcaactcttgagactgggagggtgtacacacacacgtatccattacttgtcctccacccatcaggagttaagaaaatgggagaactccacctggccatcaggttcacagccacatcccttctcaatgtgctcttcacatattctcggcccctcttgcccaagatgcattacgcgcaaccactgtcaatagtgcagcaggaaatgctccgccaccaagctgtgcaacttgtcgcacagcgtctagggcgcatggagccaccagttcgcagggaagttgttgagttcatgtcagatgcccgctcacacctgtggagcatgcggcgaagcaaggctaacttcttccgtcttatgcaagtcttctccggattcattgctgcaggaaagtggtttggcgacgtttgtcagtggaaaaacccagtcacaacagttttagttcatgtgctatttatcatgcttgtcttctacccagaccttatcctcccaacaatcttcctctacatgttcttgataggattgtggaattaccggttccggccgcgtttcccacctcatatgaacacaaggatatctcatgccgatatgacaaacccagatgagcttgatgaagaatttgatacattcccaacatcaaagagtccagatctggttaggatgaggtatgacaggctacggcatgttgctgggaggatacagacagttgttggggacattgcaactcaaggagagaggctgcagtcgctgctcagctggagggatccaagggcaacatctatgttcctattgttttgcctgcttactgcagttatcttgtatgtgacaccattccaagtgattgcactctgccttggtttcttctggatgaggcacccacggtttcgtcataaggttccatcggcacctgtgaacttcttcaggaggctacctgcaaagacagattctttgctataaatattttcagagatcaatatccaattgtgtatttattttttgtttttcagtatattgttgtatgatagcattaagggaaatacattaatatttgtaattgttgcttcatctgagaggataaaataagtccagttcaacagataattttcttgacttgatattgaaattcaaattgcatact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0483500, RefSeq:Os07g0483500