BGIOSGA011208

From RiceWiki
Revision as of 15:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011208

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011208, complete gene.

LocusTag

OsI_10537

Ensembl Transcript ID

BGIOSGA011208-TA

Ensembl Protein ID

BGIOSGA011208-PA

Length

4249

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6639193..6643441

Sequence Coding Region

6643197..6643441,6642973..6643094),complement(6641669..6641875,6641295..6641305),complement(6641112..6641168
,6640870..6641005),complement(6640655..6640751,6640450..6640550),complement(6640199..6640362
,6640003..6640074),complement(6639783..6639899,6639592..6639687),complement(6639366..6639487
,6639193..6639235

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6639193..6643441 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6639193..6643441 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGTCTGAAGAAGATGGAGGAGGTCACAGCAGCTGCTGCTGCTGTTGCAGCGAGCAGTACGGCCGAGAAGCGTGCGGCCGCCGTCGTCGTCCCCGACGCGGCGCTGACGATGAACGGTGCCGCCGGCGCGGAGGAGAAGACGGCGGCGGCTGCGGCGGCGCCGGAGGATCTGCCGGCGCCAGCCGCATTGTCCGGCTGGCCGAGGAGGGTGGGGCTCTACCTCTTCGTCATGAACATCAGGAGCGTGTTCAAGCTTGACGAGCTCGGATCAGAAGTGTTGCGCATTGCCGTGCCGGCGTCGCTGGCTCTGGCGGCGGATCCGCTTGCTTCCTTGGTAGACACAGCGTTCATCGGCCGCTTAGGTTCGGTGGAGATAGCTGCTGTTGGTGTTTCAATTGCCATATTTAACCAAGTATCCAAAGTCTGTATTTACCCCCTTGTTAGCGTTACAACATCATTTGTGGCTGAAGAAGACGCTATCATCAGTAAATGTATAGAAGAAAACAGCAGCCAAGACCTGGAGAAAGCTTCTCCTGTGGATTCAGAAACCAACAATCTGCCTGTATCTGGTCCTGATAAGGCTGTCTTCCTGGTCTTTTCAGCAAAATTTGTATTGAATATCATGGGTGTCAAGAATGATTCACCAATGCTAAGGCCTGCAGTTCGCTACCTAACAATCAGATCACTTGGTGCTCCCGCCGTATTACTGTCTCTGGCCATGCAGGGTGTTTTCCGTGGTTTCAAAGACACAAAGACACCATTGTATGCTACTGTGGTTGGAGATGCAGCAAACATCATACTAGACCCAATTTTGATGTTTGTTTGTCACATGGGTGTCACTGGCGCAGCAGTTGCCCATGTCATTTCTCAGTACCTGATAACGATGATACTGCTGTGTCGGCTCATCCGGCAAGTTGATGTTATCCCACCTAGCCTTAAATCCCTCAAATTTGGGCGGTTTCTTGGATGCGGGTTCCTGCTGCTTGCAAGGGTTGTGGCAGTGACTTTCTGCGTCACGCTGGCGTCGTCGTTAGCCGCTCGCCATGGACCTACCATCATGGCGGCCTTCCAGATCTGCTGCCAGCTCTGGCTCGCCACATCTCTTCTTGCTGATGGACTTGCCGTCGCTGGGCAGGCAGTTCTTGCAAGCGCATTCGCCAAGAATGATAAAGGCAAGGTGGTTGTTGCGACATCTCGTGTACTACAGCTGAGCATTGTTCTTGGCATGGGTCTCACTGTTGTGCTTGGGGTTGGCATGAAGTTTGGGGCTGGAATTTTCACAAAGGACATCGACGTGATCGATGTCATTCACAAAGGCATTCCTTTTGTCGCTGGCACACAGACGATAAATTCACTAGCCTTCGTGTTCGATGGCATCAACTTCGGAGCATCAGACTACACATACTCAGCTTACTCCATGGTTGGTGTGGCTGCTATCTCCATACCCTGCCTAGTATACCTTTCTGCTCATAACGGATTCATCGGTATATGGATCGCATTAACGATCTACATGAGCCTGAGGACCATAGCTAGCACTTGGAGAATGGGGGCAGCAAGGGGGCCATGGGTGTTCCTCCGGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGLKKMEEVTAAAAAVAASSTAEKRAAAVVVPDAALTMNGAAGAEEKTAAAAAAPEDLPAPAALSGWPRRVGLYLFVMNIRSVFKLDELGSEVLRIAVPASLALAADPLASLVDTAFIGRLGSVEIAAVGVSIAIFNQVSKVCIYPLVSVTTSFVAEEDAIISKCIEENSSQDLEKASPVDSETNNLPVSGPDKAVFLVFSAKFVLNIMGVKNDSPMLRPAVRYLTIRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVVGDAANIILDPILMFVCHMGVTGAAVAHVISQYLITMILLCRLIRQVDVIPPSLKSLKFGRFLGCGFLLLARVVAVTFCVTLASSLAARHGPTIMAAFQICCQLWLATSLLADGLAVAGQAVLASAFAKNDKGKVVVATSRVLQLSIVLGMGLTVVLGVGMKFGAGIFTKDIDVIDVIHKGIPFVAGTQTINSLAFVFDGINFGASDYTYSAYSMVGVAAISIPCLVYLSAHNGFIGIWIALTIYMSLRTIASTWRMGAARGPWVFLRK</aaseq>

Gene Sequence

<dnaseqindica>1..245#348..469#1567..1773#2137..2147#2274..2330#2437..2572#2691..2787#2892..2992#3080..3243#3368..3439#3543..3659#3755..3850#3955..4076#4207..4249#ATGGCTGGTCTGAAGAAGATGGAGGAGGTCACAGCAGCTGCTGCTGCTGTTGCAGCGAGCAGTACGGCCGAGAAGCGTGCGGCCGCCGTCGTCGTCCCCGACGCGGCGCTGACGATGAACGGTGCCGCCGGCGCGGAGGAGAAGACGGCGGCGGCTGCGGCGGCGCCGGAGGATCTGCCGGCGCCAGCCGCATTGTCCGGCTGGCCGAGGAGGGTGGGGCTCTACCTCTTCGTCATGAACATCAGGTTGGTTCGTCCTCTGCTATTACCATGGCAGTAACAAATCGCTTCCATTTCTCATATTCTCTCTTGCACCATGGCTCATTCTTGTGTTGCACCACCACACAGGAGCGTGTTCAAGCTTGACGAGCTCGGATCAGAAGTGTTGCGCATTGCCGTGCCGGCGTCGCTGGCTCTGGCGGCGGATCCGCTTGCTTCCTTGGTAGACACAGCGTTCATCGGCCGCTTAGGTGAGCATGCGTCACCCTGACATGTATGATTTCTCTGACGTTGCCATGGCTGCATCTTGTTCACCTGTTTAGTAAGTTCCATCAACACAGTGTTCATACTTAATTTGCTCGGTATAGATAAGTCATACAGAGGGATTTCTTCCAAATGTCAGTGCTAATTATCAGACAAATCATACAATTGATTTTACAAATATATCGAGCTTGTTGGTACTTTATACTTCATTTCCATTTTGGTAAGTTTGGCAGTGTAACCAACTTAGTACAGGGATGTCCCTTTCCATTTTTTTAAGAGCGGCAATGTCGTTTTCATTTGTATATATGGGTGGCCAATTGAATAAGTGGGTGCCGAACGCCAAATACTTCCAACAAATGTGCTCTCGAATTATTCATTCATGTTTGCTAATGGTGCCTAGCCGATTCTTGTCTTTTGTCAATATTGACAAGTCAATAAGATCTTACCTGCATGACTCCATGTAGCTGTTACTGATGCCATAATGTTCCATTTTGTTCTTTCTATCCTTTGATCAAGTCAGATATATGTTTTTTTATATGTATTTATATAGGAGGTTTTATTGTAATTTTCTTATTTATATCCTCCAGTCCAGTTAGATATATATTTTTCTTATGTAAGAGCTTTTAATGTAACGGTATTCTTCTTGTCATATGATGGGTTTCTGTTGACAATACTAGTTTTTATTTGTTTCTTTAAGTATTGCAAAATGTCGTTTCTGAGTTTTCATTTGCATGCTGAGTTCATCCTTTTTATCTCATTACAATTGGTTAGTCAGGTACATGCTGAGTTCATCCTTTTTGTTTTGTCTTTTACAACAAACAGTCCATCTGTTTCCTTTTCGTCAAATATGTCATGGTATCTCTATTTTCTTCTTTCCTATTTTTAATATGCTCCCTTTTCTTTACACAAAATTCATATAGTTGTTCACTTTTAGTATGTCTGATAAGCATATTTAGATTGCTTTTGCGTGTTGAAGTTATTTCAAAGGAATAGTTTGGAGGATCAATTTGTTTTCAGAAAACAAGCAGCTGCTGTTGATCTGAAACTTAATGCCGTGAAATATTTGTACAATTGATTTGGTCAGGTTCGGTGGAGATAGCTGCTGTTGGTGTTTCAATTGCCATATTTAACCAAGTATCCAAAGTCTGTATTTACCCCCTTGTTAGCGTTACAACATCATTTGTGGCTGAAGAAGACGCTATCATCAGTAAATGTATAGAAGAAAACAGCAGCCAAGACCTGGAGAAAGCTTCTCCTGTGGATTCAGAAACCAACAATCTGCCTGTATCTGGTACTGATTTGTCGGAACATTTTTGAGTTTCAGAATTTTGAATAGCAGTAACTTAGGCCCCGTTCTTTTATCCAACCAGAGTTGGATGAAGATTAAGATTTTCGTTGCACACTTTTCAAACATCTAAACGGTGTGTTTCGTGTGAAAACTTTATATATGGAAGTTGCTCTAAAATATCATGCGAATCTATTTTTTAAGTTTGTAATAATTAAAACTCAATCAATCATACGTTAATACCACCTCGTTTTGCATAAAAAACTTAATCTTAATCTTCATCTTCATCTGCAGGAGAAAAGAATACCGCCTTAATTCACCACAAATCTGAACTCGCTATTTGTTTATTTTGTCAAACTTTGTTTCCAGGTCCTGATAAGGTAGAATGTGTCAATTCATGTATTCCCACCGAGTGTACAAATCCCTCCGATCAAGGGTGCAAGAGAAAGTACATACCTTCTGTGACATCAGCACTAATAGTTGGCTCATTTCTTGGGCTACTTCAGGCTGTCTTCCTGGTCTTTTCAGCAAAATTTGTATTGAATATCATGGGTGTCAAGAATGTAAGTACTATTTCCTTTATCTCATTCTTTAAGCTTCAGTTACTCGTGTACTTTGTGTGACTCCTTGATCCTAACTCATTTTTTGTTTACATCACAACATTTTCAGGATTCACCAATGCTAAGGCCTGCAGTTCGCTACCTAACAATCAGATCACTTGGTGCTCCCGCCGTATTACTGTCTCTGGCCATGCAGGGTGTTTTCCGTGGTTTCAAAGACACAAAGACACCATTGTATGCTACTGGTAAGAACATCTACTGATCATGTCCTTATTTTGGTTGGATATCAACTTTGATTACAGTCAGGAAGAATATTTGAAGTTTAATGTGCCTGACATTGCTAACGTTTCTTGTTTCTTTCAGTGGTTGGAGATGCAGCAAACATCATACTAGACCCAATTTTGATGTTTGTTTGTCACATGGGTGTCACTGGCGCAGCAGTTGCCCATGTCATTTCTCAGTAAGTTTCAGTGTATTACCACCAGTTTCAGCATCATCTACAGCTCCTGCATTTCATTTCATTGATCAATTTCTCCTAACTTTTCTCACTTCTCGTTATTGCAGGTACCTGATAACGATGATACTGCTGTGTCGGCTCATCCGGCAAGTTGATGTTATCCCACCTAGCCTTAAATCCCTCAAATTTGGGCGGTTTCTTGGATGCGGTGAGATACCATTGGGATACTGAAACTGGATAACATCTCCTTAACTGAACCTTGAGAATGATACTGAAGTCTCTCTTTTTTTTTCAGGGTTCCTGCTGCTTGCAAGGGTTGTGGCAGTGACTTTCTGCGTCACGCTGGCGTCGTCGTTAGCCGCTCGCCATGGACCTACCATCATGGCGGCCTTCCAGATCTGCTGCCAGCTCTGGCTCGCCACATCTCTTCTTGCTGATGGACTTGCCGTCGCTGGGCAGGTCAGATTACCATGTCCTAATCTCATATATGTCTAATCTCATATATGTGTTCATAGAGCAGCTGTTTCAGACTTTCAGCTGTGTTCGGTTGTTCATCGATCTGTAATTTTCCTCATGGTTGCAGGCAGTTCTTGCAAGCGCATTCGCCAAGAATGATAAAGGCAAGGTGGTTGTTGCGACATCTCGTGTACTACAGGTCAGTCACAGTTTGATATTTCAGAATCTTGCTCCTGTCACTTCTCCTTTCTACTGCGAGCAACAGGGATCATGCTAACAGTACTGTTCTCATCACCTTGCAGCTGAGCATTGTTCTTGGCATGGGTCTCACTGTTGTGCTTGGGGTTGGCATGAAGTTTGGGGCTGGAATTTTCACAAAGGACATCGACGTGATCGATGTCATTCACAAAGGCATTCCTGTAAGAATATCTGTCAAGATGTTCAGAGGGTAGCAACATGTTTAACTATTTTCCAAGATTCAGACATTGACTGATAGCTTTGTTTTTGGGTTCAGTTTGTCGCTGGCACACAGACGATAAATTCACTAGCCTTCGTGTTCGATGGCATCAACTTCGGAGCATCAGACTACACATACTCAGCTTACTCCATGGTAAATCCCTTTCTTCACACATATGAGCTCTGAATATTCCCTGAAACATTTCATCTCTGAAAATCTTCCTAACAATGAATCAATGCTCTAATGAAAATCTCCAGGTTGGTGTGGCTGCTATCTCCATACCCTGCCTAGTATACCTTTCTGCTCATAACGGATTCATCGGTATATGGATCGCATTAACGATCTACATGAGCCTGAGGACCATAGCTAGCACTTGGAGGTATATCACTATAGGATATACTACAGCCTTATCCGCTCTTCATTGCAGCCATTTCTTCAGTAGCTCTTAGCTCTTAGCCTTTAGGATTCATCATATACTAGGTTGCTAATTACTTCTGCTCTATCTGCAGAATGGGGGCAGCAAGGGGGCCATGGGTGTTCCTCCGGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011208