BGIOSGA011296

From RiceWiki
Revision as of 15:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011296

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011296, complete gene.

LocusTag

OS03G0192300

Ensembl Transcript ID

BGIOSGA011296-TA

Ensembl Protein ID

BGIOSGA011296-PA

Length

3161

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5218390..5221550

Sequence Coding Region

5221337..5221550,5221130..5221199),complement(5220886..5221001,5219436..5220069),complement(5218390..5218504

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5218390..5221550 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5218390..5221550 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGACGGTGGAAGGGAGGAAGGTGGTGGGCAGGGCGGAGGCGAGCCCGGAGCGGGGCCGGCCGGCGTACGCGCCGCCGGTGAGGTCGGCGCCGGCGAGGCCGATGAGGAAGGTGCAGATCATCTACTACCTCTGCAGGAACGGCCAGCTCGAGCACCCGCACTTCATGGAGCTGGCTCAGCATCCTCACCAGCCACTTCGCCTCAAAGATGTGATGGATAGGCTCACGCTGCTTAGGGGAAAAGGCATGCCTGCTCTCTTCTCATGGTCTTGCAAGAGGAACTACAAGAACGGGTATGTGTGGAACGATCTATCTGAGAACGATGTGATCTACCCGTCGGACGGCGTGGAGTACGTTCTCAAGGGCTCCGAAATCTTCCCTGGCTGTTCTTCCGATCGGTTCCCACACCTTCGTGTCACCGATAGGTCTCCGGCGAAGCGGCTGGCGTTGCCGCCCAGCCACAAGCAGTACGTGGACAGCTACCGGGACGACGCCGCGGAGGATCCCGAGGACGACGAGCTGGGGTACGGCTACCACCGGCGAGCCGGCGGCGCTCGCCTCGCCGCGAAGCCCGTCTCGGCGCGCACCAACCGGAACCGCCCGGTGGAGCTGCCCGTGGAGGAGACCTCGCCGCCGTCGTCGACCTCCTCTGACAAGCCCCCTGCCGCGCCGCAGCTGCAGCCGGGCGGCGGCCGCGGTAGTGACGAGACCGAGTCGAACAGGGCCGGCTCGATGCTCCTGCAGCTCATCGCCTGCGGGTCGGCGGCCGGCGGCGGCTCGGCCAAGTGCCGGACCGAGCCGAGGCGGAGCTGCGGCCTGGTGAGCCGGCTGGCGGCGGCCTCACGCGCCGGCACGGAGGTCGACGACGACGAGGAGGCCGGCGGCGGCGGCGAGCTGAGCCGGCGGTTCGGCCACCTGGCGGTGGAGGAGAAGGAGTACTTCAGCGGCAGCATCGTGGAGAGCGGAGTCAGGGGCACTCCACTGCCATCCAGCTCGCTCAAACGCTCCAACTCGTACAACGAGGAGAGGAGTTCGAGGCTTGGTGTCAGCGAGGAGAGATCAACGACGGATGAGCAGATGGAAGGGGAGGAAGGGATGATCAGGGGGAGATGCATCCCGGGCAGGAAGAAGCAGCACAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MEATVEGRKVVGRAEASPERGRPAYAPPVRSAPARPMRKVQIIYYLCRNGQLEHPHFMELAQHPHQPLRLKDVMDRLTLLRGKGMPALFSWSCKRNYKNGYVWNDLSENDVIYPSDGVEYVLKGSEIFPGCSSDRFPHLRVTDRSPAKRLALPPSHKQYVDSYRDDAAEDPEDDELGYGYHRRAGGARLAAKPVSARTNRNRPVELPVEETSPPSSTSSDKPPAAPQLQPGGGRGSDETESNRAGSMLLQLIACGSAAGGGSAKCRTEPRRSCGLVSRLAAASRAGTEVDDDEEAGGGGELSRRFGHLAVEEKEYFSGSIVESGVRGTPLPSSSLKRSNSYNEERSSRLGVSEERSTTDEQMEGEEGMIRGRCIPGRKKQHK</aaseq>

Gene Sequence

<dnaseqindica>1..214#352..421#550..665#1482..2115#3047..3161#ATGGAGGCGACGGTGGAAGGGAGGAAGGTGGTGGGCAGGGCGGAGGCGAGCCCGGAGCGGGGCCGGCCGGCGTACGCGCCGCCGGTGAGGTCGGCGCCGGCGAGGCCGATGAGGAAGGTGCAGATCATCTACTACCTCTGCAGGAACGGCCAGCTCGAGCACCCGCACTTCATGGAGCTGGCTCAGCATCCTCACCAGCCACTTCGCCTCAAAGGTGCACATCTGAACATCCCTGCATCTTGTTGTATCTGCATGCTAAATGCATATGGTGCTTAGTTTAGTTAAATCTTCTATGGTGATCACCGGTTCTGATTCTTTTCTCTTTTTCTTTGGCGGTGTGCGTGCCTGAAGATGTGATGGATAGGCTCACGCTGCTTAGGGGAAAAGGCATGCCTGCTCTCTTCTCATGGTCTTGCAAGAGGTACCTAACTGAAAACTGCGGTCATTCATGCATGCTTCCCACTTGTTTCTCTATCTTTTAGTAGTACAACACTTACTTGAGCTTGATGTTGTAGTAACATTGCTGCTCATTTGTGTGCAAACATGAAGGAACTACAAGAACGGGTATGTGTGGAACGATCTATCTGAGAACGATGTGATCTACCCGTCGGACGGCGTGGAGTACGTTCTCAAGGGCTCCGAAATCTTCCCTGGCTGTTCTTCCGGTATGTACTCATCAGGCCATCACTCTACAAAGTACTCACTCGGCCAACTCCACCTGCTATCACTACTCCGTATCTTTTTCATGTGAAACTATTATTGATGGACTCGCCGTTTGATTGCACTGGGAGAGGTCGTTCAAAAAAAAAAAAGTACTGGGAGTAGTACTGGAACTGCCATGACTTTGCATGGACACCATGGTCATGGTGCATGTACTGCAATAATTTATCGTCTTTTTCAGTACTCACAAGAAAGAGGCCATCTTATCAATCTGAAAAAGGCTATTATCTTCCTAAAATAAGTGCAGCCATAGATATCCGTGTCCAGTGTTTTGACCGTCCGTCTTATTTGAAAATATTATGAAAAAATTAATAATATTAATCACACATAGAATAATATTCATGTATTATCATCTAATAACAATAACAATACTAATTATAATTCTTTTTTAAATAAGACGAACAGTCAAACGTTGAGCATAAGTAGTGTTAAAACGAGTAATTTTTTTCTTTGTTCTCACTTCACATTGTCAACTCGTTTTTCAAATGTGAAAATGGGCCATGATGGGTGCTGATAGTAAAACACAAGTACAGCTTTCTTACACCTTGCACGTTTCCTTGCTGCACCCACATCGTAAATCGTGTGTGAAGACTTCACTACGACCCTACTGTCTGAGGTTAATCAGTTAATTAATGCGTGGCGGTAGAAGAAGTCTCTCATACTGTAGCAGCATCCATCATCTGAATTATAATGGTCACCTGTCTCTGCCAAACCTGCTGTGTAAACTGTTCAATTGTTTTTTTCTCCTCTAAAATTTGCAGATCGGTTCCCACACCTTCGTGTCACCGATAGGTCTCCGGCGAAGCGGCTGGCGTTGCCGCCCAGCCACAAGCAGTACGTGGACAGCTACCGGGACGACGCCGCGGAGGATCCCGAGGACGACGAGCTGGGGTACGGCTACCACCGGCGAGCCGGCGGCGCTCGCCTCGCCGCGAAGCCCGTCTCGGCGCGCACCAACCGGAACCGCCCGGTGGAGCTGCCCGTGGAGGAGACCTCGCCGCCGTCGTCGACCTCCTCTGACAAGCCCCCTGCCGCGCCGCAGCTGCAGCCGGGCGGCGGCCGCGGTAGTGACGAGACCGAGTCGAACAGGGCCGGCTCGATGCTCCTGCAGCTCATCGCCTGCGGGTCGGCGGCCGGCGGCGGCTCGGCCAAGTGCCGGACCGAGCCGAGGCGGAGCTGCGGCCTGGTGAGCCGGCTGGCGGCGGCCTCACGCGCCGGCACGGAGGTCGACGACGACGAGGAGGCCGGCGGCGGCGGCGAGCTGAGCCGGCGGTTCGGCCACCTGGCGGTGGAGGAGAAGGAGTACTTCAGCGGCAGCATCGTGGAGAGCGGAGTCAGGGGCACTCCACTGCCATCCAGCTCGCTCAAACGCTCCAACTCGTACAACGAGGAGAGGTAAACCTTACCATTACCGGAAGTGGTAAAATCCTTTGCAAAGTCTTCGATCGCCTAACCTGCCGTAGCTAGCTTGCATCTGGCCGATCGAGTGACTGACTGACTGACATCGCGATTGTCGAATGCGTATGGCTTTTTCCTGATATCTCATCACTCGATTCGTCACATCTCTTGTCTAATTGTCGAATGCGTAGGTCATGTGTAGACGTAGCATGCAATGCTTGTCTAGACTAAACGGAAATCTTGGAATTTAGCCATGACACATGACACAACATAATAGAGGTCAACGAATGAGCACGTCCTTTTTTATGTTGGGAAAAAAAAAACGACAGCAAAAACTGCAGAAGACAGCAACCGGCATGCATGCTTGCCGTTTAGAAGGAATTGAAGTTAACCAGGCATGGCGTATGCACGGGTGTGTGCAGCGAGCTGTAGTACTTCGAATTCGCATTTTTTGCCGGAAAATACTCGATCAAACGTGTACAGTATCTCGTTTGGTTGCATGCTGTGCGCCGGTGCGTTTTGGCATGAAGACAGTAGGTTCTTTCGTGCTTCGTCGACGCGTCATGTAATCGTGCTGCACAACTGTAGACTGTGTGTGCATATTGGTATGGGCCATCGTCCAGGTCCACTCATGGCTCTCGTCAAGCTCAATCGCTGATGGATTCTGTACTAGGTTCTACTGTGTCAGCGTACGACGTTGGTGTACATAGTACTGTAAACGTACGGACAGAATCGAATCTCTCTGTGTTACACCTTTACACATCGTATGCTTTTGCCTGTAAACTTTAAAGGCATTTATTTGCAAATAACTTTTGGTTTTTAACCTCAGGAGCTCGATCAAGGCTGTGTAACACTTTTACAGATCGGTATGCGCTTTTGCCTGTAAACTTTATGGCATTTGCAAATAACTTTTGGTTTTTAACCTCAGGAGTTCGAGGCTTGGTGTCAGCGAGGAGAGATCAACGACGGATGAGCAGATGGAAGGGGAGGAAGGGATGATCAGGGGGAGATGCATCCCGGGCAGGAAGAAGCAGCACAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011296