BGIOSGA011309

From RiceWiki
Revision as of 15:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011309

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011309, complete gene.

LocusTag

OS03G0189400

Ensembl Transcript ID

BGIOSGA011309-TA

Ensembl Protein ID

BGIOSGA011309-PA

Length

1436

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5076903..5078338

Sequence Coding Region

5077966..5078338,5077789..5077871),complement(5077639..5077714,5077369..5077529),complement(5077116..5077277
,5076903..5077019

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5076903..5078338 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5076903..5078338 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATGAAAATTGCAAGGTGATCGATCTCGGAGTGACAAACTGCAGGGTGGTGGAGAGCGTAGGGGAGCATGTGGAAGGGTTCGCCGCCGGCGACCCGGTGGTGCCCACGTTCCTGGGCCAGTGCACCGAGTGCGTGGACTGCGCCTCGGAGCGGAGCAACGTGTGCTCCACGTACCGGTTCGCGGTGCGCCCCGGGATGCCGCGCGACGGCACCGCCCGCTTCCGCGACCGCCACGGCGCCCCGATCCACCACTTCCTCGGCGTCTCCAGCTTCAGCGAGTACACCGTCGTGGACGCCAACCAGGTCGTCCGCGTCGACCCCGCCGTGCCGCCCGCCACGGCCTCCCTCCTCAGCTGCGGCGCCACCACCGGGGTCGGAGCAGCGTGGAAGCTGGCTAAAGTCGAGCCGGGGTCTTCGGTTGCTATCTTTGGCCTCGGCGCCGTAGGATTAGCGGTAGCTGAAGGGGCCAGGATTTGCGGTGCGTCAACGATCATCGGTGTGGATTTGAACCCTGAGAAACATGAACTTGGAAAGAAGTTCGGTGTGACGCACTTCATCAATCCACAAGAACTTGGGGACAAACCTGTCAGCCAAGCGATCATCGAGATGACTGACGGTGGCGCGGACTACTGCTTCGAGTGCATCGGGCTGGCGTCGGTGATGAGCGATGCATTTCGGAGCTCCCGAGAGGGATGGGGCAAGACGATCATTCTTGGCGTCGAAATGCACGGTGCCCCTTTGTCCATTCCTTCGTTGGAGATCCTCAACGGCAAATGCGTAATGGGATCACTCTTCGGAGGGGTGAAACCCAAGCAGGACATTCCCATCCTGGCCGACAAGTATCTGAACAAGGAGCTGGAGTTGGACAAGTTCATAACTCACGAGGTTCCCCTGAAGGACATCAACACGGCATTTGACCTTCTGTTGCAGGGGAAGAGTCTCAGATGCACCATTTGGATGGACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MYENCKVIDLGVTNCRVVESVGEHVEGFAAGDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFRDRHGAPIHHFLGVSSFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGAAWKLAKVEPGSSVAIFGLGAVGLAVAEGARICGASTIIGVDLNPEKHELGKKFGVTHFINPQELGDKPVSQAIIEMTDGGADYCFECIGLASVMSDAFRSSREGWGKTIILGVEMHGAPLSIPSLEILNGKCVMGSLFGGVKPKQDIPILADKYLNKELELDKFITHEVPLKDINTAFDLLLQGKSLRCTIWMDK</aaseq>

Gene Sequence

<dnaseqindica>1..373#468..550#625..700#810..970#1062..1223#1320..1436#ATGTATGAAAATTGCAAGGTGATCGATCTCGGAGTGACAAACTGCAGGGTGGTGGAGAGCGTAGGGGAGCATGTGGAAGGGTTCGCCGCCGGCGACCCGGTGGTGCCCACGTTCCTGGGCCAGTGCACCGAGTGCGTGGACTGCGCCTCGGAGCGGAGCAACGTGTGCTCCACGTACCGGTTCGCGGTGCGCCCCGGGATGCCGCGCGACGGCACCGCCCGCTTCCGCGACCGCCACGGCGCCCCGATCCACCACTTCCTCGGCGTCTCCAGCTTCAGCGAGTACACCGTCGTGGACGCCAACCAGGTCGTCCGCGTCGACCCCGCCGTGCCGCCCGCCACGGCCTCCCTCCTCAGCTGCGGCGCCACCACCGGTTCGTCCTACTAGTCTACTGCTGGCACGTACACTGGCAGAGATGCAGGCATACCTGCCGTTCTCTCACGATCGCTCGCGTGCATGCGTTGCAGGGGTCGGAGCAGCGTGGAAGCTGGCTAAAGTCGAGCCGGGGTCTTCGGTTGCTATCTTTGGCCTCGGCGCCGTAGGATTAGCGGTAATTAATTTTCGATTATCTGGTGTACAATATTGAAGTGTACGTATGTTATAGTGAAGTATTTTTGTTGTCAGGTAGCTGAAGGGGCCAGGATTTGCGGTGCGTCAACGATCATCGGTGTGGATTTGAACCCTGAGAAACATGAACTTGGCAAGCCCTTCTGCTCATGAAACTGTTCTGAATGTTGATTACAATTCAGACCTTTGGTCGATGTCCTAGTTTATACTAGTAGTTAGTAACACCTTTTGTTGATTTTCAGGAAAGAAGTTCGGTGTGACGCACTTCATCAATCCACAAGAACTTGGGGACAAACCTGTCAGCCAAGCGATCATCGAGATGACTGACGGTGGCGCGGACTACTGCTTCGAGTGCATCGGGCTGGCGTCGGTGATGAGCGATGCATTTCGGAGCTCCCGAGAGGTATGCATTACAGTTGTACTCGAACATCCTAGTGTACGTTGGATGAGCTGATCCACCTGTGTCTGAAGATACTAACTGTTTACTGCTGCAGGGATGGGGCAAGACGATCATTCTTGGCGTCGAAATGCACGGTGCCCCTTTGTCCATTCCTTCGTTGGAGATCCTCAACGGCAAATGCGTAATGGGATCACTCTTCGGAGGGGTGAAACCCAAGCAGGACATTCCCATCCTGGCCGACAAGTATCTGAACAAGGTAAACCTTTCACTTTCAGACACCCTCAAAACTGATTAACTGTTCATAGTGTCACAATATTTTAACATCAAGATTGTTGATACGAACGCAATGCAGGAGCTGGAGTTGGACAAGTTCATAACTCACGAGGTTCCCCTGAAGGACATCAACACGGCATTTGACCTTCTGTTGCAGGGGAAGAGTCTCAGATGCACCATTTGGATGGACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011309