BGIOSGA011420

From RiceWiki
Revision as of 15:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011420

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011420, complete gene.

LocusTag

OSJNBA0011L14.4

Ensembl Transcript ID

BGIOSGA011420-TA

Ensembl Protein ID

BGIOSGA011420-PA

Length

851

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3573064..3573914

Sequence Coding Region

3573825..3573914,3573625..3573721),complement(3573064..3573584

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3573064..3573914 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3573064..3573914 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCTGCTGCCGCCACCTCGCCGCGCAACTACACCGACTTCGTTCCGCCGCACCAGCTGGTCGAGGAGGCCGGCAAGAAGTTTGATTTTAGAGGTTTTTCGTCGCATTCTGTTTTTCAACACCAACTTTTAGACCGAATACAAATTGTTTTTTATTGCTCAGTTCATGCAATGCAAGGGTTCAAGAAGGAGCAGCTGAGAGTGCAGATCGACAACCACGGGAAGCTGCGGATAAGCGGCGAGCGGCAGGTCTCCGGCAACCGGTGGAGCCGCTTCCACAAGGATTTCCAGGTCCCCGATGACTGCAACGCCGGCGACGTCCGCGCCAGGTTCGACTCCAGGGACCGCGTCCTCCACATCACCATGCCCAAGCTGTCGCCGGCGGAAGAGGAGCCCAAGGCCGCCGCCGCCGCCGCACCCGCCGATCATGGCGCCGCGCAGGCGCAGCAAACCGCTGCACCAGCAGATCAAGAGAAGGAGGACAAGGAAGAAGAAGATGACGATGGCGCGGCCAACGACGGGGCGGCGGCGGGTGGCACCGCCTTGGTGACCGGCCGGAGGAAGACGCCGTGGAGGGTGGTCCTCGCCGTCGTGCTGGCGTTGGTGGCCGCCGCCGGCTTCTACGCCAAGTACAGGCTGATGATGGATCCGTCGGCGGCGGACGGCGGACATGGTCTCATCGGCTTCTCCGACCATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAATSPRNYTDFVPPHQLVEEAGKKFDFRGFSSHSVFQHQLLDRIQIVFYCSVHAMQGFKKEQLRVQIDNHGKLRISGERQVSGNRWSRFHKDFQVPDDCNAGDVRARFDSRDRVLHITMPKLSPAEEEPKAAAAAAPADHGAAQAQQTAAPADQEKEDKEEEDDDGAANDGAAAGGTALVTGRRKTPWRVVLAVVLALVAAAGFYAKYRLMMDPSAADGGHGLIGFSDH</aaseq>

Gene Sequence

<dnaseqindica>1..90#194..290#331..851#ATGGCCGCCGCCGCTGCTGCCGCCACCTCGCCGCGCAACTACACCGACTTCGTTCCGCCGCACCAGCTGGTCGAGGAGGCCGGCAAGAAGGTCCTTCAAATCAACCTATCTGCCGCAGGCAAGAGCATTATTCCTTCCCACCTCTTCGCTTATGAGCCGCAACAAAATTAAATTTCAATTTTGGGAACTGCAGTTTGATTTTAGAGGTTTTTCGTCGCATTCTGTTTTTCAACACCAACTTTTAGACCGAATACAAATTGTTTTTTATTGCTCAGTTCATGCAATGCAAGGTTTGATATGTGTCATTTTGGATGGCGGGTGCAATTGCAGGGTTCAAGAAGGAGCAGCTGAGAGTGCAGATCGACAACCACGGGAAGCTGCGGATAAGCGGCGAGCGGCAGGTCTCCGGCAACCGGTGGAGCCGCTTCCACAAGGATTTCCAGGTCCCCGATGACTGCAACGCCGGCGACGTCCGCGCCAGGTTCGACTCCAGGGACCGCGTCCTCCACATCACCATGCCCAAGCTGTCGCCGGCGGAAGAGGAGCCCAAGGCCGCCGCCGCCGCCGCACCCGCCGATCATGGCGCCGCGCAGGCGCAGCAAACCGCTGCACCAGCAGATCAAGAGAAGGAGGACAAGGAAGAAGAAGATGACGATGGCGCGGCCAACGACGGGGCGGCGGCGGGTGGCACCGCCTTGGTGACCGGCCGGAGGAAGACGCCGTGGAGGGTGGTCCTCGCCGTCGTGCTGGCGTTGGTGGCCGCCGCCGGCTTCTACGCCAAGTACAGGCTGATGATGGATCCGTCGGCGGCGGACGGCGGACATGGTCTCATCGGCTTCTCCGACCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011420