BGIOSGA011470

From RiceWiki
Revision as of 15:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011470

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011470, complete gene.

LocusTag

OS03G0144000

Ensembl Transcript ID

BGIOSGA011470-TA

Ensembl Protein ID

BGIOSGA011470-PA

Length

4662

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2869922..2874583

Sequence Coding Region

2874488..2874583,2873798..2873866),complement(2873570..2873668,2873105..2873242),complement(2870982..2872600
,2869922..2870879

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2869922..2874583 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2869922..2874583 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCTGACGGCGGCGCCGCCGGCGAGGAGGCGGAGGAGAGGAGGAGGAGGAGCGAGCTCGGGTCCCTCGTGGAAGCCATCAAGTCCTCCGAGATTGCTCTTAAATGCTCAGAATTAGATACAACCAATTGCTTGGGGCCATTTCTTACTCTTGGTTCAAAGGCTGGTTCGTGGTGTGTGAGGCATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACTCCAGATTATTTCCTGAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTGTTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGTTACTAACCCTGACTGAAAGCTCAATACTTGACAAGAAACTCGGAACTACAGGACATGTTGCTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGGCTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACAAAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGTGTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATATCATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGAATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGAGGGTTGCTACTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGAAGGGCTTTCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTGAAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTATTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGGAGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGTCTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACACCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATTCTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACTTCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTACATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAATTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTTCTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGAGTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAATTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATTTAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCACCTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGTCTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCTTGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGGAACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACTTCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTTGGGCATAATAGGGTTTCCTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGAACACTACTGAAGATGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGAAAAGGAAGATGCCAGATGGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATGATGTGGAAACAAAGAAGAGGAAGATGCCAGATAGAATTTGTGAAGGAATGATGCTTGTACAGAACGGTCTCAAGATCATGCGGAGTGCTCTCAGTGAAACAGACTTGGCGGAGCTGAAGGACAGGTTTGCTGTACACTTGTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCTCTGATAAAATCTAA</cdnaseq>

Protein Sequence

<aaseq>MEADGGAAGEEAEERRRRSELGSLVEAIKSSEIALKCSELDTTNCLGPFLTLGSKAGSWCVRHLLWSVESIDESEDAQEEEHSRLFPEIIALTLNISSKHLPVASKCIAEDTVHAVGDFILELLTLTESSILDKKLGTTGHVAKAAPVFLDETIKLCRVYSEAAKSDQCIMSMPKEETTEEHKETDLTSNIAQITACTIQSLCKIGTHAASSGGSQVILLNISWKGIISLLQLGKGMVEEKVNVREIILIPISVAIESLRVATERWCVPLQEVLGTAEARRAFLPIKYFLTNAVRICSIYPSETMAIYKSIIRCALLISHSSILFCRNPQLKAASELLFELLEPSSFLLLDTLMKSTEVSPESKCQLVQYFLEKVRTGNPEYTGEVDHTMNFATLGCIFSVDSDVDNINRALLPAEFTVFLHFLNASPWLREEVVIELCKKLHLFLNILTLEDVYSYVLGCQIPALSSDDDSPKVVWQPVYTSLIQALKTFMIAASSSSAAWSEFEVFLLENLFHPHFLCLEILTELWCFFMHYAEAETSTYLINQLFLLLKTLASPEEVLAPLSALRKLARASCNILSYASSATIDQIYTMLNDSSSKSSILYLALLMEGFPFDSLSRGVKEHAVKTLFTSFAGYLQNQNYFKNHGEINLPTSSSLGIIGFPVHALASAFQSCEIKDVTIDEKSIATMFKIATSLINLYRTSPDSSKNLLVKHISSILVIITHMRHLCAFSELEKLTLELHTLFMSSFDNSNTAISQCKPSMASFMAILGHLNTTEDDANPLCSAMWDLFHFLLRERHWALIHLAMGSFGYFAARTSFAQLWKFVPVDAALSYTCTGVDIDEDGFMSELKAFLQKEVALRDDKWSEEQICSLVSEGRMLKKLVESCLEIPLVPEPEKVSITNYVKTKKRKMPDGICEGMPENVSVTNDVETKKRKMPDRICEGMMLVQNGLKIMRSALSETDLAELKDRFAVHLSRLEDAVSHLASFSDKI</aaseq>

Gene Sequence

<dnaseqindica>1..96#718..786#916..1014#1342..1479#1984..3602#3705..4662#ATGGAGGCTGACGGCGGCGCCGCCGGCGAGGAGGCGGAGGAGAGGAGGAGGAGGAGCGAGCTCGGGTCCCTCGTGGAAGCCATCAAGTCCTCCGAGGTGCGTGCTCGTGCGGCTCCTCGTCCCCATTTGCTCCGTTAGGCCACTTCTAGGGTTTAGCTTGATACATTGTTCGAGTGCTGCGGCCGTGATTGGTTTCCACGAATAGAGAGTTCGGTCGAGTGGAATGGATGTAGATTTGGGGGGTGGGGATGGGGGAATGGATGTTTCTGGGTGGGATTTAAGATGAATCTCCGCGAACTTCTGTAGGTGTTGGCCGTTGGGGTTTGGGGATTTGTGCGCGCTCTAGTTAATCCATACTCTTCCAGGCATTAATAACAACATGATCTGTATATAATAGCAGGTTTTGGAGAACAGAATTTCCCTTATCAACCAACTCGAGGATCCTTTTCAGTTGTGTGCAGATGATCTGGGCCTAGTGGTTGAAAGTCTGATCGTATCCTTTATTGCTTTATCTCGGTATACTTGATATATCCAGAAACACGATGATATATGTAGCCAGTCGGATGGACTCACTGATTCATTGTTTCTTAGTGGACGTTGTCAGTGTTTTCTAGTAAGGAGTTTTCTTATGGTACCTTGACAACATCTTAGGCATCGTGGGATGATTCCACATGTTCCGGTGTATCACACTGCATGCTACACAAGTCAATTCTGCAGATTGCTCTTAAATGCTCAGAATTAGATACAACCAATTGCTTGGGGCCATTTCTTACTCTTGGTTCAAAGGTACTTGTTGCCATTCCAAATGGAGTCTTGCTTCATCATAAGTGCCAGCTGTACCTACCTTGCCTGCCTATCTGCTTTCTGGCTCAACCAATCAAAACATTTGCTTGTTTTTTGGTGCACCTATGCCAGGCTGGTTCGTGGTGTGTGAGGCATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACTCCAGATTATTTCCTGAGGTCAAGGGCTTTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAAAAAGATCTGTTTGTATTTCATTGCAATACATGTAGTTATCAGTAATAACAGAAAGAACATTTGTACATTACTCTCAATCACTACATTTTTTTTCAATGCAGACCTATGCAAGTGAACAGTACTACTCTCAATCACTACATTTTTTTCACCAGCTCATATTAGTTTATACTTAATTGTTCTACATTCTGGAGATTCATTACATCATTTATTCCTTTCTGTAACTGTGATTCTATCTAGAATGTTCCAATACAAGTTCAACTTATTTGACTGCAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTGTTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGTTACTAACCCTGACTGAAAGCTCAATACTTGACAAGGTAACGGTTCAGTTCCTATATTACACAATGGTCGTATCAGGTGGTTTAACTTGCATGACCGAAATCTATATTTCTCTCCTTTTTTTTATGATCATGTTGCTTGATTTATGACCTACAAGATAGTTTTATATGCTATCTTGCATATATATATCCTTCATCTCCTGAAAGTAACTTAGCAACAAAAATCTAAAGGGGAAATAGCAAATAATGGCCAACTAGAGTAAATATGTTACCTCCATGACATTACAATAACAATAGACCTTATCTGTTTCAAATTACTTACAAGTTTTGTTTACTCCTAAAGAGATGTTTTCTGTGAGAATATTGGAAATTCATCCTTTAATTGGAAGTGCTTCCTACCCTTGACTAATACATAGATTCGTCAGGCTAAAATTTATGTTTTTTTATCCAACTTTGATCATATGAGATGGTAGTGCTCTTTTCAAATCATTGAAATGCTAATATTGTAGAAATGGAGTCATTGTCTATGCTCTCTGTTGACAGAAACTCGGAACTACAGGACATGTTGCTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGGCTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACAAAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGTGTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATATCATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGAATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGAGGGTTGCTACTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGAAGGGCTTTCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTGAAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTATTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGGAGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGTCTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACACCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATTCTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACTTCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTACATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAATTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTTCTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGAGTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAATTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATTTAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCACCTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGTCTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCTTGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGGAACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACTTCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTTGGGCATAATAGGGTTTCCTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGGTAAGTCCCTTGTCTCTTACTATTATTCAGTCTGATGCTAAAATGCTGCTTTTATTTTTGGAACCAAAGAAACAATTCTTTTGTACACAATATTTTATGCAGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGAACACTACTGAAGATGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGAAAAGGAAGATGCCAGATGGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATGATGTGGAAACAAAGAAGAGGAAGATGCCAGATAGAATTTGTGAAGGAATGATGCTTGTACAGAACGGTCTCAAGATCATGCGGAGTGCTCTCAGTGAAACAGACTTGGCGGAGCTGAAGGACAGGTTTGCTGTACACTTGTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCTCTGATAAAATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011470