BGIOSGA011501

From RiceWiki
Revision as of 15:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011501

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011501, complete gene.

LocusTag

OS03G0135400

Ensembl Transcript ID

BGIOSGA011501-TA

Ensembl Protein ID

BGIOSGA011501-PA

Length

2484

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2234049..2236532

Sequence Coding Region

2236386..2236532,2236065..2236270),complement(2235775..2235868,2234049..2235470

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2234049..2236532 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2234049..2236532 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCGCGCTGCCGTCCGCCGTCCTCGCCACCATCCTCTCCCGCCTCGACGTCCGCTCCCTCGTCGCCGCCTCCGCCGCCTGCCGCTGCCTCCGCTCCTGCGCCTCCCACGCCCTCTCCTTCCTCCCCTCCTTCCACCTCTCCGAGGTGGCGCTGACGCACGAGCTGCTCCGCCCGCTGATGCCGCTGAACCCGAGCCTGCGGAGCATCCGCCTCGACTGCGCTAGGCTCGAGGACGCCGCCATCGACTGCCTTGCCCGCCCCGACCTCCATGAGCTGATGCTCCTCAACTGCGATAACATTAGCGGCCGCCTGCTCTGCGAGCTTGGAGCCACCTGCCAAGAACTCAGAGTGCTTTCCCTGAATGCCCTTGCTGAGCGTAGGGGACTACCGATAAGCTTCTCTGATCTGCAGCAATTGCTTAATGGCTGTTCTCAATTGGAGTCTCTCAGGTTGGCCCTTGATTTCTCAATGTTCGATGACCCCAATTTTAGCCATGTGTGGGCATCTGCTTCAGAAGCCCTGACCTCCCTAGAAATCGGATATATTCCAATGACAATGTTGCTTGAACTTCTTACTGTGGCTATGGAATCGCAACGATGCATGCATCATGTAAAGGAACCTGTTTTCTTTCCTAGCCTCCAAAAGTTATGCCTCACCGTGGACTTCATCACTGACCATTTGATTGGTTCACTATCAACTGCGCTTCCATCATTGACACATCTGGACCTGCAGGATGCACCTATAATAGAACCTACAACATCATCAGATCTCACCAATGCTGGTCTTCAGCAGATTAATCCAAATGGTAAGTTGAAGCATATTTCTCTCATGAGAAGTCAGGAGTTCTTATTCACCTCTTTCCGCCGAGTAAATGATCTTGGAATCCTGCTAATGGCTGAAAAGTGCTCAAGTCTTGAGAGTGTCTGTCTTGGTGGTTTCTCCCGCGTGACAGACACAGGTTTTAGGGCTATCATCCACTCTTGTTCTGGCCTTCATAAGCTTAGGGTGTCCCATGGAAGCCAGTTCACAGATCTTGTTTTCCATGACATAATTGCCACTTCCCTTTGCCTGACACATGTGAGCCTGAGGTGGTGTAATCTCCTTACTGACGTTGGAATTGAGAGGTTGTCATTCAACAAGGATCTCAACGTATTGGATCTCAGGGACTGCAGGAGTCTGGGTGATGAAGCTGTTAGATCTCTAAGCTGCCTTCCCAAATTGCAGATATTATTCTTGGATGGAAGTGATATCAGTGATCAGGCATTGAAGTATCTGGGCCTTGGAACATGTCCACTAGCTTCCTTATCTCTGAGGGGTTGCCGAAAGTTAACAAATGATTGCATACCACTCTTGTTTGCTGGTTCTGTTAAACAGAGCTTACAGGTGTTGGATCTCTCTAGAATACCAGGTATTACTGATGATGGTATCATGTTATTAGCAAGGAGTCGAACTCCTATTATTGAACTCCGAATGAGAGAGAACCCGAAAATAGGAGATGCTGCTGTGATGGCTCTTGCGTCTATGCTAGTTGATGGTGGAACCCATGGCAGTAGCTTGCAGCTGCTGGATCTTTATGATTGTGGTGCGATTACACCACTTGCAATCCGGTGGTTCAAGAAACCATATTTCCCAAGATTGCGATGGCTAGGAGTAACGGGCAGCTTGAACAGGGTTATGGTGGATGCCCTTGTTCGAAGCCGTCCATTCTTACATATGGCTTGCCGTGGTGAAGAATTGGGGACTTTCAATTGGGATAGATCCTCCGATTGGTATCGACATGATGATGATGATCTTGATGAGCTTGAACAGTGGATTTTGAATGGTGAACCTGTATCTGACACTGAAACCATCACTGAAGAATAA</cdnaseq>

Protein Sequence

<aaseq>MDSALPSAVLATILSRLDVRSLVAASAACRCLRSCASHALSFLPSFHLSEVALTHELLRPLMPLNPSLRSIRLDCARLEDAAIDCLARPDLHELMLLNCDNISGRLLCELGATCQELRVLSLNALAERRGLPISFSDLQQLLNGCSQLESLRLALDFSMFDDPNFSHVWASASEALTSLEIGYIPMTMLLELLTVAMESQRCMHHVKEPVFFPSLQKLCLTVDFITDHLIGSLSTALPSLTHLDLQDAPIIEPTTSSDLTNAGLQQINPNGKLKHISLMRSQEFLFTSFRRVNDLGILLMAEKCSSLESVCLGGFSRVTDTGFRAIIHSCSGLHKLRVSHGSQFTDLVFHDIIATSLCLTHVSLRWCNLLTDVGIERLSFNKDLNVLDLRDCRSLGDEAVRSLSCLPKLQILFLDGSDISDQALKYLGLGTCPLASLSLRGCRKLTNDCIPLLFAGSVKQSLQVLDLSRIPGITDDGIMLLARSRTPIIELRMRENPKIGDAAVMALASMLVDGGTHGSSLQLLDLYDCGAITPLAIRWFKKPYFPRLRWLGVTGSLNRVMVDALVRSRPFLHMACRGEELGTFNWDRSSDWYRHDDDDLDELEQWILNGEPVSDTETITEE</aaseq>

Gene Sequence

<dnaseqindica>1..147#263..468#665..758#1063..2484#ATGGACTCCGCGCTGCCGTCCGCCGTCCTCGCCACCATCCTCTCCCGCCTCGACGTCCGCTCCCTCGTCGCCGCCTCCGCCGCCTGCCGCTGCCTCCGCTCCTGCGCCTCCCACGCCCTCTCCTTCCTCCCCTCCTTCCACCTCTCCGTCAGTAACCACCCACCCCCCCTGCCTCTGCTCTCTCGCATCGCCATCGCCATCGCCACCGGCTACGGATTTGACGGGGTTTCGTTTCCTCTTGTGTCTTTGTCTGTGATTGAAGGAGGTGGCGCTGACGCACGAGCTGCTCCGCCCGCTGATGCCGCTGAACCCGAGCCTGCGGAGCATCCGCCTCGACTGCGCTAGGCTCGAGGACGCCGCCATCGACTGCCTTGCCCGCCCCGACCTCCATGAGCTGATGCTCCTCAACTGCGATAACATTAGCGGCCGCCTGCTCTGCGAGCTTGGAGCCACCTGCCAAGAACTCAGGTACTCTTCTACTGCTCTGTTAACTCTGCAGGGTGACATCGCTAACAGAAAATACTGCAGTTTATGATCCCAATAAAACAAAATGCAGTGAACCAGCGTTACTGTTTGCTTAGAGTCGCTTCTGTTCTGAACTAAAGTTTGATTCAGTTGTCAAATATGGTATTGAGAAGTACATTTCTTTCCCGCTTGGATGTAGAGTGCTTTCCCTGAATGCCCTTGCTGAGCGTAGGGGACTACCGATAAGCTTCTCTGATCTGCAGCAATTGCTTAATGGCTGTTCTCAATTGGAGGTATTGTTTCGCTCTCAATTACTATTGCAACAACTAATTTGTGCAATCATGTTTTCCATTAGTTGAAAACACCGTAGATATATATAATTCTAGTTTTTATTACCGAATCAGTTATGTGAAACCAAAGGTGTTTATATTGTGATTGTTTAGTTTTCTATTACTCTTCCCTATTGGATCATAAGTCACTATGAACATAAATCTTTGTGAAAATTTCTACTACTTTGAAGTATGATTATCTTTTGCTTTGAAATCCAATTACCTTTTACTGTTCTGGACTGGCAACTTATGTCCCTCTTATTTTCAGTCTCTCAGGTTGGCCCTTGATTTCTCAATGTTCGATGACCCCAATTTTAGCCATGTGTGGGCATCTGCTTCAGAAGCCCTGACCTCCCTAGAAATCGGATATATTCCAATGACAATGTTGCTTGAACTTCTTACTGTGGCTATGGAATCGCAACGATGCATGCATCATGTAAAGGAACCTGTTTTCTTTCCTAGCCTCCAAAAGTTATGCCTCACCGTGGACTTCATCACTGACCATTTGATTGGTTCACTATCAACTGCGCTTCCATCATTGACACATCTGGACCTGCAGGATGCACCTATAATAGAACCTACAACATCATCAGATCTCACCAATGCTGGTCTTCAGCAGATTAATCCAAATGGTAAGTTGAAGCATATTTCTCTCATGAGAAGTCAGGAGTTCTTATTCACCTCTTTCCGCCGAGTAAATGATCTTGGAATCCTGCTAATGGCTGAAAAGTGCTCAAGTCTTGAGAGTGTCTGTCTTGGTGGTTTCTCCCGCGTGACAGACACAGGTTTTAGGGCTATCATCCACTCTTGTTCTGGCCTTCATAAGCTTAGGGTGTCCCATGGAAGCCAGTTCACAGATCTTGTTTTCCATGACATAATTGCCACTTCCCTTTGCCTGACACATGTGAGCCTGAGGTGGTGTAATCTCCTTACTGACGTTGGAATTGAGAGGTTGTCATTCAACAAGGATCTCAACGTATTGGATCTCAGGGACTGCAGGAGTCTGGGTGATGAAGCTGTTAGATCTCTAAGCTGCCTTCCCAAATTGCAGATATTATTCTTGGATGGAAGTGATATCAGTGATCAGGCATTGAAGTATCTGGGCCTTGGAACATGTCCACTAGCTTCCTTATCTCTGAGGGGTTGCCGAAAGTTAACAAATGATTGCATACCACTCTTGTTTGCTGGTTCTGTTAAACAGAGCTTACAGGTGTTGGATCTCTCTAGAATACCAGGTATTACTGATGATGGTATCATGTTATTAGCAAGGAGTCGAACTCCTATTATTGAACTCCGAATGAGAGAGAACCCGAAAATAGGAGATGCTGCTGTGATGGCTCTTGCGTCTATGCTAGTTGATGGTGGAACCCATGGCAGTAGCTTGCAGCTGCTGGATCTTTATGATTGTGGTGCGATTACACCACTTGCAATCCGGTGGTTCAAGAAACCATATTTCCCAAGATTGCGATGGCTAGGAGTAACGGGCAGCTTGAACAGGGTTATGGTGGATGCCCTTGTTCGAAGCCGTCCATTCTTACATATGGCTTGCCGTGGTGAAGAATTGGGGACTTTCAATTGGGATAGATCCTCCGATTGGTATCGACATGATGATGATGATCTTGATGAGCTTGAACAGTGGATTTTGAATGGTGAACCTGTATCTGACACTGAAACCATCACTGAAGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011501