Os07g0496300

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Revision as of 08:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0496300| Description = Pleckstrin homology-type domain containing protein| Version = NM_001188282.1 GI:297725694 GeneID:9271882| Length = 3...")
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Gene Name

Os07g0496300

Description

Pleckstrin homology-type domain containing protein

Version

NM_001188282.1 GI:297725694 GeneID:9271882

Length

3629 bp

Definition

Oryza sativa Japonica Group Os07g0496300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19259936..19263564

Sequence Coding Region

19260909..19260925,19261001..19263551

Expression

GEO Profiles:Os07g0496300

Genome Context

<gbrowseImage1> name=NC_008400:19259936..19263564 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19259936..19263564 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaccgccgcggacccctcctccctctccggcgactcctccccgacctcctccggcgacgccgaatcctcctcctccccgtcctcctccgccgccgccgctgggggctccgacgaccccgcccccgtcgaccaagtcgtcgcctcgggctccggtgcaggcggcgatggcgacgccgccgcagccgtcccaacctcgccgcgcattggcatgtacttcgagacggaggaggacgcgtacgagttctacaaggcgtacgccgccaggctcggcttcgtcgtccgcaagtccaacaagtccaagaactcgcgccacaccgtcacccgccgcctcttcgtctgctccaagcagggattccgccaagaacccaagaagccgcctcaggacgaggccgccgcggcgtcgcccccgcctccgcggtgcccggactcgcgcactgggtgcctggcgtcgctcaccatcaagctcctcccgtcggccaacgcgttccgagtcaccgactttgccaccgagcacaaccacccgctcgcctccgccgcgcccgccgtgtcgctggcattgctgccgccgagctcgtcccaccacaccatcgctgccgtggcgagcctgccggacccgagggatgggccacgcaccgatatgcactttgagacggaggacgacgcgtatgctttctacaaccggtacgctgagcatgtgggcttcagtgtccgccgctcgtacaagaagcgaaagcgtggggtgatcgtgtcccggatctttgtttgttcccgcgagggagttagtgaccgtgccaagcacgagagtattgccattgtcagcaacaatgctagcacagggccatcaggcacacctagaccaggccctccaccgacgcggacagggtgccaggcaagaatggtaatcaagatcaccccatgccggacgtaccgggtggcaaagtttgttccggagcataatcatccacttgccaatccagatagtgtgcacaagctgcggtcgcacaaaatgagggctcgagctcatgagcttggggcaggggaactgcatcgcagaaagcatgggaaaggtgtgcaacttggggatgctggagcagtgctggaatacttggaagagctgcaggtagggaacccttcagtgtattatgcggtaggagtggggcctgatggaaaatcagctgcaaatttcttctgggctgatgcagagtcaatgatcgactataggagctttggtgatgttgtttgctttgatacaacatatgagttaaatgggtatggaaggccatttgcattgtttgttggtgtggacaaccacaaacagatgcttgtgtttggtgctgctctgctttatgatgagagcattgaatcattgaaatgggtattcaaggcgtttgctgatgcaatgtgtggtaagcagccagacactgttttgattgatgagcgtcctgagtgtgctatggcagcagcagaggtttggccaagaagtagccattgcacaagtgtgtggcatatctaccataactcaaagaggcacttgaagcaggtatttgaaggctcaaagagttttgccaatgctttaagccattgtctctttgaatgtgatgatgaggtggaattcttgtcagcatgggaaaaactaattgagaagcatgatgtaggtgagaatgagtggctcaacaaactttttctggagaaagaaaaatgggctttgccttattggagagccttgttttctgctgatatcctcaccactcttaggaaggataatatgattaatgatattaaacgggagctcagtgagcaagaagatattctgcagttcttaaggcgctatgagaccatgcttgaggagcatcggtcaaagaaattgcaggctgatgttgatggaagccaggtgacattgccaatcccatccttgcgaatgttaaagcaagcttcaagtgcatacacgcccgaagctttcaagatgttccagggtgagtttgaggcttacatgaattgcatgtccttcccatgtggtggacttggcacaatctcggagtataaaataacacttgatgagaagccatcagagagcattgtgaaatttgatgcactagatggatcagctacgtgcagctgtaggaagtttgaatctgttggaattcagtgctgtcatgtactaaaggtacttgatctcaagaatataaaggaactcccagaacaatacattttgaggagatggagaaaagacgctcgttctgtcagaataggggaagaaccttctggtggatctagcagtatgcgttcagcctcagaagtccgcttcagtactatgtgccgttttcttagcttgatagcttcaagggctgccagatctgaggaggcaacgtcttatatcgaaagtcaatcaagtgttcttctgaagcatctagatgatattttacaaacaggttatcctgatataggaaatcatgttgttgcttcaagtagtcaaccaatttcttttgtgggaaaccaacttcctgaccatacatcacaagcaagaggagttccacagaccacaaatggcctgatgggggtttga</cdnaseq>

Protein Sequence

<aaseq>MSTAADPSSLSGDSSPTSSGDAESSSSPSSSAAAAGGSDDPAPV DQVVASGSGAGGDGDAAAAVPTSPRIGMYFETEEDAYEFYKAYAARLGFVVRKSNKSK NSRHTVTRRLFVCSKQGFRQEPKKPPQDEAAAASPPPPRCPDSRTGCLASLTIKLLPS ANAFRVTDFATEHNHPLASAAPAVSLALLPPSSSHHTIAAVASLPDPRDGPRTDMHFE TEDDAYAFYNRYAEHVGFSVRRSYKKRKRGVIVSRIFVCSREGVSDRAKHESIAIVSN NASTGPSGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKFVPEHNHPLANPDSVHKLR SHKMRARAHELGAGELHRRKHGKGVQLGDAGAVLEYLEELQVGNPSVYYAVGVGPDGK SAANFFWADAESMIDYRSFGDVVCFDTTYELNGYGRPFALFVGVDNHKQMLVFGAALL YDESIESLKWVFKAFADAMCGKQPDTVLIDERPECAMAAAEVWPRSSHCTSVWHIYHN SKRHLKQVFEGSKSFANALSHCLFECDDEVEFLSAWEKLIEKHDVGENEWLNKLFLEK EKWALPYWRALFSADILTTLRKDNMINDIKRELSEQEDILQFLRRYETMLEEHRSKKL QADVDGSQVTLPIPSLRMLKQASSAYTPEAFKMFQGEFEAYMNCMSFPCGGLGTISEY KITLDEKPSESIVKFDALDGSATCSCRKFESVGIQCCHVLKVLDLKNIKELPEQYILR RWRKDARSVRIGEEPSGGSSSMRSASEVRFSTMCRFLSLIASRAARSEEATSYIESQS SVLLKHLDDILQTGYPDIGNHVVASSSQPISFVGNQLPDHTSQARGVPQTTNGLMGV</aaseq>

Gene Sequence

<dnaseqindica>2640..2656#14..2564#agctcacgctctcatgtccaccgccgcggacccctcctccctctccggcgactcctccccgacctcctccggcgacgccgaatcctcctcctccccgtcctcctccgccgccgccgctgggggctccgacgaccccgcccccgtcgaccaagtcgtcgcctcgggctccggtgcaggcggcgatggcgacgccgccgcagccgtcccaacctcgccgcgcattggcatgtacttcgagacggaggaggacgcgtacgagttctacaaggcgtacgccgccaggctcggcttcgtcgtccgcaagtccaacaagtccaagaactcgcgccacaccgtcacccgccgcctcttcgtctgctccaagcagggattccgccaagaacccaagaagccgcctcaggacgaggccgccgcggcgtcgcccccgcctccgcggtgcccggactcgcgcactgggtgcctggcgtcgctcaccatcaagctcctcccgtcggccaacgcgttccgagtcaccgactttgccaccgagcacaaccacccgctcgcctccgccgcgcccgccgtgtcgctggcattgctgccgccgagctcgtcccaccacaccatcgctgccgtggcgagcctgccggacccgagggatgggccacgcaccgatatgcactttgagacggaggacgacgcgtatgctttctacaaccggtacgctgagcatgtgggcttcagtgtccgccgctcgtacaagaagcgaaagcgtggggtgatcgtgtcccggatctttgtttgttcccgcgagggagttagtgaccgtgccaagcacgagagtattgccattgtcagcaacaatgctagcacagggccatcaggcacacctagaccaggccctccaccgacgcggacagggtgccaggcaagaatggtaatcaagatcaccccatgccggacgtaccgggtggcaaagtttgttccggagcataatcatccacttgccaatccagatagtgtgcacaagctgcggtcgcacaaaatgagggctcgagctcatgagcttggggcaggggaactgcatcgcagaaagcatgggaaaggtgtgcaacttggggatgctggagcagtgctggaatacttggaagagctgcaggtagggaacccttcagtgtattatgcggtaggagtggggcctgatggaaaatcagctgcaaatttcttctgggctgatgcagagtcaatgatcgactataggagctttggtgatgttgtttgctttgatacaacatatgagttaaatgggtatggaaggccatttgcattgtttgttggtgtggacaaccacaaacagatgcttgtgtttggtgctgctctgctttatgatgagagcattgaatcattgaaatgggtattcaaggcgtttgctgatgcaatgtgtggtaagcagccagacactgttttgattgatgagcgtcctgagtgtgctatggcagcagcagaggtttggccaagaagtagccattgcacaagtgtgtggcatatctaccataactcaaagaggcacttgaagcaggtatttgaaggctcaaagagttttgccaatgctttaagccattgtctctttgaatgtgatgatgaggtggaattcttgtcagcatgggaaaaactaattgagaagcatgatgtaggtgagaatgagtggctcaacaaactttttctggagaaagaaaaatgggctttgccttattggagagccttgttttctgctgatatcctcaccactcttaggaaggataatatgattaatgatattaaacgggagctcagtgagcaagaagatattctgcagttcttaaggcgctatgagaccatgcttgaggagcatcggtcaaagaaattgcaggctgatgttgatggaagccaggtgacattgccaatcccatccttgcgaatgttaaagcaagcttcaagtgcatacacgcccgaagctttcaagatgttccagggtgagtttgaggcttacatgaattgcatgtccttcccatgtggtggacttggcacaatctcggagtataaaataacacttgatgagaagccatcagagagcattgtgaaatttgatgcactagatggatcagctacgtgcagctgtaggaagtttgaatctgttggaattcagtgctgtcatgtactaaaggtacttgatctcaagaatataaaggaactcccagaacaatacattttgaggagatggagaaaagacgctcgttctgtcagaataggggaagaaccttctggtggatctagcagtatgcgttcagcctcagaagtccgcttcagtactatgtgccgttttcttagcttgatagcttcaagggctgccagatctgaggaggcaacgtcttatatcgaaagtcaatcaagtgttcttctgaagcatctagatgatattttacaaacaggttatcctgatataggaaatcatgttgttgcttcaagtagtcaaccaatttcttttgtgggaaaccaacttcctgaccatacatcacaagcaagaggagttccacagaccacaaatggtataaatttgaacatttctgccaaaatcatttattactgatttcaagtttttaacggaagtgatgaccttgtaggcctgatgggggtttgacagagcaattgcagtccagaccatactggctactatggtacgtatgatgtagctattttcgattactttttacatgccagaaatgtactgtactttgtggtatgtagcaatttgtacatgacttgaaccataacttgacatgttaagtagtactcgtggttctgaagggcataattatggagttgggggttcaagcattaaaattctttttttttttaatctactgatctagtcccatactcccatgccatgtgtccaatcaatagtaagtcttggtaattctctatttcaggaaaatgatttggtaacagcataacacagatgctatttgtacttgatgcctccaaccactgacatatatgccagtatatatgggtttatggtgggcactcagatgtttgatgcgtataggaatgatgctatattactatttgagaagtttttccttttaattgggcataattgtccaaaaactcttctcaacaagaaaatttaactctattagttttagtatttttgtgctttctggctaactcctttttgtactttctgttatatcggattaacattgttgcttgtttgcacttctgaaactactgagtgtttcggctattacacttgacttttgcatgttagagcttatgttaagtttccatgtgtcaatttcttattgttgatgagtacttctttggaagtactgataattggcttgtttcttaacttttaggtctgacatcattgttggggatttcaacggttgatgagtttgtaaaatccagcagacaattgggattgaccagtgggttctttgtagtgttagtcaaatgcaggagtatggctaggctatgtacagtatttatctggtaccatgttgatgcaagcaagtgtattctgtagatcctgtctttctcaaattatactttggtagctgttctgctaaatataaccaatcctgatgtctctgtgctttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0496300, RefSeq:Os07g0496300