Os07g0496600

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Revision as of 08:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0496600| Description = FAR1 domain containing protein| Version = NM_001066237.2 GI:297607261 GeneID:4343296| Length = 3899 bp| Definition ...")
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Gene Name

Os07g0496600

Description

FAR1 domain containing protein

Version

NM_001066237.2 GI:297607261 GeneID:4343296

Length

3899 bp

Definition

Oryza sativa Japonica Group Os07g0496600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19270961..19274859

Sequence Coding Region

19271558..19273831,19273918..19274049

Expression

GEO Profiles:Os07g0496600

Genome Context

<gbrowseImage1> name=NC_008400:19270961..19274859 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19270961..19274859 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagaggaggagtacaatacggaatcgtctaatgaggaagacatgcaagaagatgatggtgagaaacaaggaaatgttgccgagggtgatatcttcaagccggttgatatagatcccgcgtttgtaccaaaagtagggatggtgtttgagtcggaggaagacgcctttcagttctatgtgtcttacggctgccgctctggttttggtatcacaagaagatcgaacaataccttcgatggtttccgctatcgctctacattcatatgctctaaaggagggcagtctagactgaggtctggcgcgacgagatccgcaagaaaacgaggcacaaagactggatgcaaggctaagatgattgttaaggatgctcattttcaaaaccgctgggaagttattgttctagagttggaacataaccatccgttggatcctagcttacttaaatttaagaagcagctaaagaactctcctttccttcagaatccacctcttatgcttgaagcaccagacagtagctcagctgctgcgctttctagcagaggcggtgatagcggcatacctttgtctacccagattgaattcaggaccaagatagatagaaataggaaactgaagcttgctgaaggtgatctagatgccttattgagttttctcaacaaaatgcaagaccaaaatccgtacttcttttacagtttggatatgaatgagcaaggacaactaaggaatgtattttgggctgatgccaaatcacgttcttcttacaattactttggtgatgttgttgctattaatgtcagaaactttagcgaccaatatgaaatacagtttgtgtcatttgtgggcactaaccaccatgctcagcaagtattactagggtgtggtcttcttgctggtagatctcttggagcttacgtctggctttttgatacatgggtaagatgtatgaacagcacgccaccaccttcagtaattacaaactactgtcatgatgttgcaatagctgttaaaaaggttttccctaatgcacgttaccgcttttgccttctcgacatcttaaatgagcttcctgaaaagttggaggaaacagaaaagaaggatgaaatagtttctgcatttagctcactagcctttgattccattaccatgcctgattttgacaaagattggcaagaaatggtcgaacaatttcatctagagggaaacgaatggttgtccaaactatttgaggtcaggacacagtgggctcctgtttatgtgaaggattccttttgggcaggaatgtctattacagaaagaagtgatagtgcatctgactattttgatggctggttgatgccagatacctctgtaaaaatgtttgttgagcagtatgagtctgctgtgaaagttaagttagaaaaggaaaactatgaggatttacggtcatctcagatgaggccaccggtgatgactggtgtatctgtggaggagcaagcagcaaagatgtacacattggagatatttcagaagttcttagatgaaatcgggcattcttttcattgcaattatagtatacttgaccggaatgaatcagtggttacatacatagtttcagatcacattgatgaaacaaagaaggtggactacaaagttgcttatgataatgtcgaagatgacatattgtgtctctgccgattgttccaattcaaaggtatattatgcaggcatgctcttactgtactgaggcaggagtttgtaccaatgattccaccaaaatacatcatccatcgctggtgcaaggattgtaaacaaacttgttcttccatgtcacagcctgtatcattaagtaatcaggaaacaggaggctatgatgatctctacaaactcactcaccaatatttcacagaagtagtggaatttggttctgtgaactcagaatcaaagggctatgctttatcaatcatgagggagataagggataaagtgatttcttatgagaagtcactaagagatcagagggttgatagtcatgtttcaaccgcaaattttgcatacaatccagtgaatgaggattttaatgatgacactttgcccatttctcttagtacaaaaggatgggatgttgtacaaggtcagtcaaaacgttcccgcaagaagaaactggcaaccccgaatgttcttgacaccttgaagaagaaaactaaaagagcatataacaagagaaggaatgccatggcaaataccttaaacacggcagtcaccacaaccgaaagcataactgacgccacaaatcataatcaagttaatgagggatggccattgacatctactggtgcacacgaaaccttcccttatggagtaagatcaaatatacacatcccatgtttttctccttatctgttctttctgtattggtggatctga</cdnaseq>

Protein Sequence

<aaseq>MEEEEYNTESSNEEDMQEDDGEKQGNVAEGDIFKPVDIDPAFVP KVGMVFESEEDAFQFYVSYGCRSGFGITRRSNNTFDGFRYRSTFICSKGGQSRLRSGA TRSARKRGTKTGCKAKMIVKDAHFQNRWEVIVLELEHNHPLDPSLLKFKKQLKNSPFL QNPPLMLEAPDSSSAAALSSRGGDSGIPLSTQIEFRTKIDRNRKLKLAEGDLDALLSF LNKMQDQNPYFFYSLDMNEQGQLRNVFWADAKSRSSYNYFGDVVAINVRNFSDQYEIQ FVSFVGTNHHAQQVLLGCGLLAGRSLGAYVWLFDTWVRCMNSTPPPSVITNYCHDVAI AVKKVFPNARYRFCLLDILNELPEKLEETEKKDEIVSAFSSLAFDSITMPDFDKDWQE MVEQFHLEGNEWLSKLFEVRTQWAPVYVKDSFWAGMSITERSDSASDYFDGWLMPDTS VKMFVEQYESAVKVKLEKENYEDLRSSQMRPPVMTGVSVEEQAAKMYTLEIFQKFLDE IGHSFHCNYSILDRNESVVTYIVSDHIDETKKVDYKVAYDNVEDDILCLCRLFQFKGI LCRHALTVLRQEFVPMIPPKYIIHRWCKDCKQTCSSMSQPVSLSNQETGGYDDLYKLT HQYFTEVVEFGSVNSESKGYALSIMREIRDKVISYEKSLRDQRVDSHVSTANFAYNPV NEDFNDDTLPISLSTKGWDVVQGQSKRSRKKKLATPNVLDTLKKKTKRAYNKRRNAMA NTLNTAVTTTESITDATNHNQVNEGWPLTSTGAHETFPYGVRSNIHIPCFSPYLFFLY WWI</aaseq>

Gene Sequence

<dnaseqindica>598..2871#2958..3089#tcttgcccaccgctgccgcctccggctccggctccggcgatccccatccatcccgcgagcgagcagggcgccgtcattcatcctgctgcatcctggtgagcacatcctccgccaccgccgatccccatccaatcgcgcgtgcgagcgagcgagcgagctgggtcgccgtcgctcgtcctgctgcttccgccgcatccgttacgcacatcctctttcccatctctctctctctacccacgcactttttttctcgaatttgcgttaaccctagcttctgctctagaaatttgccttaaccttaatactagtaactgtttgatggttcctaagaaggtttggggggttcaactgaacccccaatgtcccatgttagatccgccactgtcagtagagttggaaatttgcactgggtgttgcaaagcctaggaagctttgttttataaactgtttccgcttatcagtttatttaccttcgtatgtgatgatgacgcgcagagtgttctgttagtggccaccattcttttgtcaaggatatgtatgtacacagggcatgatttatttcctctattttctgcctgactagattatttggggccaatggaagaggaggagtacaatacggaatcgtctaatgaggaagacatgcaagaagatgatggtgagaaacaaggaaatgttgccgagggtgatatcttcaagccggttgatatagatcccgcgtttgtaccaaaagtagggatggtgtttgagtcggaggaagacgcctttcagttctatgtgtcttacggctgccgctctggttttggtatcacaagaagatcgaacaataccttcgatggtttccgctatcgctctacattcatatgctctaaaggagggcagtctagactgaggtctggcgcgacgagatccgcaagaaaacgaggcacaaagactggatgcaaggctaagatgattgttaaggatgctcattttcaaaaccgctgggaagttattgttctagagttggaacataaccatccgttggatcctagcttacttaaatttaagaagcagctaaagaactctcctttccttcagaatccacctcttatgcttgaagcaccagacagtagctcagctgctgcgctttctagcagaggcggtgatagcggcatacctttgtctacccagattgaattcaggaccaagatagatagaaataggaaactgaagcttgctgaaggtgatctagatgccttattgagttttctcaacaaaatgcaagaccaaaatccgtacttcttttacagtttggatatgaatgagcaaggacaactaaggaatgtattttgggctgatgccaaatcacgttcttcttacaattactttggtgatgttgttgctattaatgtcagaaactttagcgaccaatatgaaatacagtttgtgtcatttgtgggcactaaccaccatgctcagcaagtattactagggtgtggtcttcttgctggtagatctcttggagcttacgtctggctttttgatacatgggtaagatgtatgaacagcacgccaccaccttcagtaattacaaactactgtcatgatgttgcaatagctgttaaaaaggttttccctaatgcacgttaccgcttttgccttctcgacatcttaaatgagcttcctgaaaagttggaggaaacagaaaagaaggatgaaatagtttctgcatttagctcactagcctttgattccattaccatgcctgattttgacaaagattggcaagaaatggtcgaacaatttcatctagagggaaacgaatggttgtccaaactatttgaggtcaggacacagtgggctcctgtttatgtgaaggattccttttgggcaggaatgtctattacagaaagaagtgatagtgcatctgactattttgatggctggttgatgccagatacctctgtaaaaatgtttgttgagcagtatgagtctgctgtgaaagttaagttagaaaaggaaaactatgaggatttacggtcatctcagatgaggccaccggtgatgactggtgtatctgtggaggagcaagcagcaaagatgtacacattggagatatttcagaagttcttagatgaaatcgggcattcttttcattgcaattatagtatacttgaccggaatgaatcagtggttacatacatagtttcagatcacattgatgaaacaaagaaggtggactacaaagttgcttatgataatgtcgaagatgacatattgtgtctctgccgattgttccaattcaaaggtatattatgcaggcatgctcttactgtactgaggcaggagtttgtaccaatgattccaccaaaatacatcatccatcgctggtgcaaggattgtaaacaaacttgttcttccatgtcacagcctgtatcattaagtaatcaggaaacaggaggctatgatgatctctacaaactcactcaccaatatttcacagaagtagtggaatttggttctgtgaactcagaatcaaagggctatgctttatcaatcatgagggagataagggataaagtgatttcttatgagaagtcactaagagatcagagggttgatagtcatgtttcaaccgcaaattttgcatacaatccagtgaatgaggattttaatgatgacactttgcccatttctcttagtacaaaaggatgggatgttgtacaaggtcagtcaaaacgttcccgcaagaagaaactggcaaccccgaatgttcttgacaccttgaagaagaaaactaaaagagcatataacaagagaaggaatgccatggcaaataccttaaacacggcagtcaccacaaccgaaagcataactgacgccacaaatgtatgtattgtaataagatccgctgagttagttgaaattttttccttgtggtcgtctaatattgaagtttttctcattaggtgcagcataatcaagttaatgagggatggccattgacatctactggtgcacacgaaaccttcccttatggagtaagatcaaatatacacatcccatgtttttctccttatctgttctttctgtattggtggatctgatgtagataaaacccttctcacttttttttttcaaaattgtgtttgctttctaggtggagactatttcattcgatttgtctcaatacaacagtgcacctagcttccactggcctgaaagcagtagcaggtctcagcttcagtgagatgaggtgaaaaatgcaatggtccatgcgttgagaatattctaagtttgacagacttgcaagatgggcaaagttattaattaccttgtttcatgctggagggttcctgaatcctgaccatctgaggaatgtgagaaaaggctcaacctggcgaaaaccagtaataacaaccggcttttaacggattcggtctatattggttgtcccctgatattttagatatatgtaatggctgagatgtacataatcatttcccctttttctcatcctcagataaattgtagcttccactaggtaatgtgtaatgttaatcctgatcattcacgtggtcacgtcttaaataattagactgaatgttactcctgtaaaccccatagtcatggaatgtacattgctcagaactatgcccttctgcagacttgagttttttctggcaactccaccaaagatgctgacttgttaatttgctgcaaaactgaagtctttggatctggcagaaactgtttttttttttaaatcttaatctttttgtttcttccagtgacatgtaatgtaagtccatttaaccagttctatttcacaagcttccccagctaaccatgtactgcaatatatgtatgcgattgtcgatttgtaatggtattatatatttcttctattttctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0496600, RefSeq:Os07g0496600