Os07g0497000

From RiceWiki
Revision as of 08:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0497000| Description = Similar to Mi-2 autoantigen-like protein (Helicase-like protein)| Version = NM_001066240.1 GI:115472212 GeneID:434329...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0497000

Description

Similar to Mi-2 autoantigen-like protein (Helicase-like protein)

Version

NM_001066240.1 GI:115472212 GeneID:4343299

Length

8411 bp

Definition

Oryza sativa Japonica Group Os07g0497000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19285640..19294050

Sequence Coding Region

19291140..19291195,19291899..19292070,19292410..19294050

Expression

GEO Profiles:Os07g0497000

Genome Context

<gbrowseImage1> name=NC_008400:19285640..19294050 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19285640..19294050 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagatgggtcttggaaagactgtgtctgcctgtgcttttctatcatccctatgttgtgaatataagattaacttgccatgtcttgtcttggttcctctttctactatgcccaactggatggctgaatttgcatcatgggcacctcatttaaatgttgtggagtatcatggttctgcacgggcaagatctattattcgtcaatatgagtggcatgagggtgatgcaagccagatgggtaaaatcaagaaatctcataagttcaatgtattgctcactacttatgaaatggtgcttgttgatgctgcatatcttcggtctgtgtcatgggaggttcttatagtcgatgagggtcatcgtctgaagaattctagcagcaaacttttcagtttactcaatacattatcatttcagcatagagttttgctgactggaactccgttacagaataacattggtgaaatgtataacttattgaacttcttacaacctgcttctttcccttctctagcttcatttgaggagaaattcaatgaccttacaacaacagagaaagtggaggagctgaagaaccttgtagctccacatatgcttcgaagactgaaaaaggatgcaatgcaaaatatccctccaaagactgaacgaatggtgcctgttgaattgacatcaatccaggctgaatactaccgtgctatgcttacaaagaactaccaagtattgcgcaatattgggaaaggtggtgctcaccagtcattgttgaacatagtaatgcaacttcggaaagtctgcaatcatccgtatcttattcctggaactgaacctgaatcaggatcaccagagttcttgcatgaaatgcgaataaaggcctcagcaaagttaactttgttgcactctatgcttaaaatcctacacaaggatggtcatcgagttcttattttttctcagatgacaaagcttcttgacatccttgaagattacctgacttgggagtttggtccgaaaacatttgaaagagtggatggttcagtatctgtggcagaacgccaggcagcaattgctcgttttaatcaggacaagagtcgttttgtattcctgctatctacgcggtcatgtgggcttggaattaatttggcaactgcagatactgttatcatatatgattctgatttcaatccacatgctgatatacaggcaatgaacagagcacacagaattggacagtcaaacagacttttagtttacaggcttgtcgtgcgtgctagtgttgaggagcgtatcttgcaccttgcgaagaaaaaattgatgcttgatcaactttttgttaacaaatcagaatcacagaaggaagtggaagatatcattcgctggggaacagaggaactcttcaggaatagcgatgttgcagttaaagataataatgaagcttctggtgctaaaaatgatgtagcagaggttgagtttaagcataaaagaaaaactggtggactaggcgatgtttatgaagacagatgtgctgatggttctgctaaatttatttgggatgaaaatgctatcacaaagcttcttgacagatccaacgttccatcaacagtagctgaaagcactgatggggacttggacaatgatatgcttggcactgtaaagtcaatagattggaacgatgagctgaatgatgaccctggtgccaccgaggacatcccaaatattgataatgatggttgcgagcaggcatctgaagcaaagcaggatgcagctaatcgtgttgaagaaaatgaatgggataaactcttacgtgtcaggtgctgcactataccatatgggagcagtatcaaactgaggaggaagcatctcttggtcgaggtaagcgtttaa</cdnaseq>

Protein Sequence

<aaseq>EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFA SWAPHLNVVEYHGSARARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAA YLRSVSWEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNF LQPASFPSLASFEEKFNDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPV ELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESG SPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKT FERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPH ADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQKEVE DIIRWGTEELFRNSDVAVKDNNEASGAKNDVAEVEFKHKRKTGGLGDVYEDRCADGSA KFIWDENAITKLLDRSNVPSTVAESTDGDLDNDMLGTVKSIDWNDELNDDPGATEDIP NIDNDGCEQASEAKQDAANRVEENEWDKLLRVRCCTIPYGSSIKLRRKHLLVEVSV</aaseq>

Gene Sequence

<dnaseqindica>2856..2911#1981..2152#1..1641#gagatgggtcttggaaagactgtgtctgcctgtgcttttctatcatccctatgttgtgaatataagattaacttgccatgtcttgtcttggttcctctttctactatgcccaactggatggctgaatttgcatcatgggcacctcatttaaatgttgtggagtatcatggttctgcacgggcaagatctattattcgtcaatatgagtggcatgagggtgatgcaagccagatgggtaaaatcaagaaatctcataagttcaatgtattgctcactacttatgaaatggtgcttgttgatgctgcatatcttcggtctgtgtcatgggaggttcttatagtcgatgagggtcatcgtctgaagaattctagcagcaaacttttcagtttactcaatacattatcatttcagcatagagttttgctgactggaactccgttacagaataacattggtgaaatgtataacttattgaacttcttacaacctgcttctttcccttctctagcttcatttgaggagaaattcaatgaccttacaacaacagagaaagtggaggagctgaagaaccttgtagctccacatatgcttcgaagactgaaaaaggatgcaatgcaaaatatccctccaaagactgaacgaatggtgcctgttgaattgacatcaatccaggctgaatactaccgtgctatgcttacaaagaactaccaagtattgcgcaatattgggaaaggtggtgctcaccagtcattgttgaacatagtaatgcaacttcggaaagtctgcaatcatccgtatcttattcctggaactgaacctgaatcaggatcaccagagttcttgcatgaaatgcgaataaaggcctcagcaaagttaactttgttgcactctatgcttaaaatcctacacaaggatggtcatcgagttcttattttttctcagatgacaaagcttcttgacatccttgaagattacctgacttgggagtttggtccgaaaacatttgaaagagtggatggttcagtatctgtggcagaacgccaggcagcaattgctcgttttaatcaggacaagagtcgttttgtattcctgctatctacgcggtcatgtgggcttggaattaatttggcaactgcagatactgttatcatatatgattctgatttcaatccacatgctgatatacaggcaatgaacagagcacacagaattggacagtcaaacagacttttagtttacaggcttgtcgtgcgtgctagtgttgaggagcgtatcttgcaccttgcgaagaaaaaattgatgcttgatcaactttttgttaacaaatcagaatcacagaaggaagtggaagatatcattcgctggggaacagaggaactcttcaggaatagcgatgttgcagttaaagataataatgaagcttctggtgctaaaaatgatgtagcagaggttgagtttaagcataaaagaaaaactggtggactaggcgatgtttatgaagacagatgtgctgatggttctgctaaatttatttgggatgaaaatgctatcacaaagcttcttgacagatccaacgttccatcaacagtagctgaaagcactgatggggacttggacaatgatatgcttggcactgtaaaggtaatttaatttgtgtaccttctttttaaataattgactactcatgcaatgaattgtgatatctagaatgccatcttgtctgtgtgtcaccaaaaaatagtgttttacttaaaggaagtttctaatcattttttctcaattaaactttttttgtttatgtccagttacagacaaatttctacactaatttagatctttaatttcttagaccacttttaaccattgcattttttttctgtatggtactgtccatcatattctgatgtatgttatactttgtgcaatcaataacttctctgtgtggttcttaattaattctcttttaaacccatttatcagtcaatagattggaacgatgagctgaatgatgaccctggtgccaccgaggacatcccaaatattgataatgatggttgcgagcaggcatctgaagcaaagcaggatgcagctaatcgtgttgaagaaaatgaatgggataaactcttacgtgtcaggtgctgcactataccatgtacttgttcttcctcttggcttatgatggtcttaatttataatttttttcttgtttacttcgtaactttacatgccagaaaataaacatgatggacgaataaatactccaagcctagaatttaagaaactgaataagttaagacacgccacatctcagcttatgaaatttcatttctcttagtcttttccagtggattcaaatttgtggtagcacaaatccctacttttgggaggcgcatgatgcactacttagagtcatgcgaaacaaatgtggacaagtgccttctgttcaccaaaacctcatctgacctttcaaaaatttccacagccaccatttcttgtttctacttaaacactaccatcattctttttctgatgtttaggtctttaggacatcgatccggctccaacacaaatgtttgatcattgtcttttttaatcatatattcataaaagatattgaaaatataaccacatgaaattattttcatgaaaaatctactcatatgagtcacatatcaaatcttaatatttttggatttattagcgagttaagatttcaaggtttgactgcagcacgccttctaaaacatcatctaatttagaacagatggagtagaaggtgaggccacgaaatgcaatcatagtagctttactggttgcagctaactctctctctctctctctctctctcatctcagatgggagcagtatcaaactgaggaggaagcatctcttggtcgaggtaagcgtttaaggaaggctgtttcttacagggaaacatttgcaaccattcctaatgaagctttaagcgaggtaattctgcattttgaccttgttctgcatttattttctgttgatcagttagcaatgctggttcataagttaatttactgtgttactaccttctgcataaaaaaatatgcttgcctaaatatcctgtaagggatctgttctcctagctaacgagcataaatttatctttgcatttttgtccaccgtggtccacttattgtggcatataattgctgcaaccctatgaacattgagctttgcaacttttgctttctctataagtgcataaactattcaaagtatgccttatgaggctctctgaatatatatatatatatatatatatatatatatatatatatatattgcaacattttgaatctgtaagtcaaaaattgtaccacaatccccacataactgaatttttcatgcgccattttgattttcttgatttgttcctctctgctattcactcatgcctattgaatactttccgtccaccacacagatggaaatctgaggtggcacttaacggatgccacaatagactattaataattgccaaatgacctactgttctctttacttggagtcatgatgagataatcacaattactcagcgataagccgcctccttgtgggcataaccagaggagagggggagaggagggggataagttcgccctggaaacctaggtggcggcacttccatcctaccacggatctgcgcttccctcctcccctttgcggcaccaccgcatcctcttccttgtccttcatcaccttctccacctcgtccctgtttcccagcaaagtactcttctactcccatctttcctctgctttatgctgatttgttcttctccctccatgcttccttcctatcttctttctggtgtgctgccgagccgccaccttcactactttaggcggcggcggcagctcgcttcctgctagtgcacctgcattagggtgagagggagagggtgctttaaatgggctattgtgctggggtttactgcgcaatactatagtgtgctgtgagtggcttaatgtaatttaggcccatatcttctctctctctctctctctcaaaattgtgtaatctgtacatctgatcacttaggctgaattgctgaaaggcaggggtgggtgctttgcattgccaccgtaacaacgatgagaatgctttcctaagtcctcataccctcacccctttacattttcatacacaggacaccaaacccttaacaacagacacaattcaaatgatttatgggagctctttgtagttttagtttgtgttaacatagttcaaaaaataattttgcaataaattactctttattatgggctctttgatgaattactactaaataatttcattttgtgggatttatcctatgtaattctacagacacatgataacatgtgaattcctgtgaccctgcaggactcacttttcttatttatgtacgattttggaaaatcggctagttagggctattcaagggggatatgattttggtagtgttgttctttagagcttgacaaagcatgttaatagctgtaatgttgaattgttatggcaaatgggaacgacagtctgagctgtgggcatcatatagctttaaaatcgagatagtgtgtgtgttcagtctaccactcatgttcacgttctcaaaatcaggctttccgttgaaaaaagtaaaaccaatgcctactttagtgtcttggagaatcaaatgaacagttgaaacttgcttatatttgaaagcttatgtgttccctgataattcagatatataccagagttccctgaatagtttaatctcccatgagtaatattgcgtgcattcaatataaatgtaatattcagagacttccgcagatatgttactgcagtgcagtttttaatttgctatttgccttgcactcttatattcacaatagttttgagtcatggtttcatgatttgctggcattggtataggactctgatgaggaggatgaaccaaagcgagaatacactgcagctggactggctttgaaggaaaaatagtatgctatctatccctttatctccctccctctccctcatgctaaggctggggattcctatacttactttcgcatgtgcccttatcatcaggcattgatttacttctgattgtaacagtgaaaaactccgagctagacaaaaggaaaggattgctcagcgccatgtgattaagaattatgctgatgacagacttgaagaattcatgaaactatatgattccagtgcaaatcccttgagaattgtagaagatcccaatcctgtgcagccatctggggctaaacgtctcggtgaatcaactgcagaaatgaagcaatcctcgaagaaaaccaagagatatcctgaaattcctcaagagctttatgccaagcttactggcaatgctgcttcatcaaaacatcacccaaaggcagcagatatctccaattcaggaactccacatcaccttttacctgttcttggcctttgtgctccaaatgctgatcagatgaactcatataaagggtcagtttgtgggccaagcacaaaggagcaaaaaagagctagtggtgaactagccaacaaaccgctgttgactcctgctgttgatcattctagcgaacaaaaacatgatggccaaccaactccttgtaagcctatgtttcctggttcctccgaggagactttgcgaaggctgaataatatcattccagacagttacttccccttccaacctgtatgtcctcttctttctttggtagcatattatttcatctagttgctttatcgttgttcatgctttttcttcaaaagtgaaaaatataagatagttgtccactttatacttattaggaggaaatggtgcaacctaccctgatattagtttttaaaatattttttatggatgcaaaattgggaaaaaaagaatccattcttgagtacagcatatatgatgttttatctagttaagagcatcattaaagaaaaagaatgacaaggtttttgtgtgcagattcctcctatatccgggaaggggattggtgatcatgtagaaaatcctgtatcgtccattccttcatttcaagggaaactgggtcttcctaattttagtctggaagacagtattccacttaagcatttgaagtcagtaccggatctatttcccaacttgtctttgggcactagcaatgaatatcttcgtaattgtgtcccagaattgccaaatagttcatttctaccaagctttatggcagatattgctggaacttcaaagcagaagaacaagttcatggcagatatgtctggccttcttccaggtttggcaatcaacccagttcaacaaatccattcgtccatgcctgaaaatcataagaaggtcttggacaaattaatgatgcgtgctcagtactcctcaagcaagttcttgaagaatgcctcaaataaattcctgaagaagagtttaaaaccagactattggtcagaagatgaactcgatgctttgtggattggggttcgcaggcatggaagaggaaattgggaggccatgcttagagatccaaagctgaagtttttgagccaccgatctcatgaagagctggcctcaagatggattttggaggagcagaaaattatagaggaaccaatgcctacagccaccagaagctccaactctacatcatttcctggcatatcggatgcaatgatgtctcgggcacttaatggaagtagcttttccaaactgaggatggagccgccaaagttgcagtcccacctaactgacattcagttaggttgcaatgatataccaaccagattttctcatgttgagcccactaattacatgaatttaagtgagggtggtccatcactgacaccgtggcaggatttcaaaaatagatcaggacacagtggagattttcctggcccacttgacaagtgggagaaacctgatatggggttgatcccaccatttatgccgaatccttttatgaaggaaagcattgggtcactgcccataaacagacacagcagtaattccattcagcagaatgaagttggatcaagttctcatgagagcatacttcatggtttttcggacggacaggccaaattattccatgagatgcaacggcgtgtgaagttagggaaattacccattgagatgaatctgaatcacacaaagctgtcagatcctctagctgagaactctggtgattttgaaagttcaaaaccgaacaagctaccgcactggcttcaggaggctgtgcgtgcacctccatccaagccacctgaatgtgagctaccagcaactgtttcagctattgctcagtctgtgtgcctactacttggagagcaaaaaccagcaatacctccattcccgattccaggacctcgtctctctctccccaaggacccaaggagtgctccaaagaagaggagagttcacaaagttcagcaagcttcctccctggtagatcattccaaaactacagttgggcaaggtgaccacaactctactccgtcagcaccactatccatggaagccgcacctgcctctcctgcagttattaaaagcagtgataccccctcgctcaacttgaactcaccatcttcatcatcagctggcagtcgggggcaggatgcgtcaaccccttccacttttgaagaaccagaaagaaccatggaagtttcagaacctgcttctgtcgctgctgccacttgcccgtccaggccagagcctcctgagactggtactcacagaatcgagttctccgcggtagatgacatggatactggatcttgtagatcacctgtgagggatactcctgaccctgacaatcagaagagcgaattgtctggatcaggtaatacacctactgaactttctgtattaccgttggttgatgcacctgggacgagcagcgaacctgctgtagtgcccgtatccagcgacgaggagtcaacccaagagggtgtaccaggcaaagccgtaagcaccggcgaccaggagaaacggacgccccctgatgagagcgaaaattcaggtgcggcaaatccagtttcggcagctcagacagctgacgaagataaggtggacgagatgatcacagatgagcattagaacttttgagcaatgagctcaaatgcttatttttcttccatttagcgctgggattttccctttcccaatggtttccagtgtgtggaggtatcaggtacctgccttttgtgtttgtatgcttagcccagaatccagatagagtaaaaatccagggactagtagtttagccctctagtccagcgggagcaaactctcgaaagcctctatatacatgaagtgtatattttcagacatggtaccttggacatggacaagtattcatttatttatgcgtgtatgatttagatagtccgtttaccaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0497000, RefSeq:Os07g0497000