Os07g0498400

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Revision as of 08:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0498400| Description = Protein kinase-like domain containing protein| Version = NM_001066245.2 GI:297607263 GeneID:4343304| Length = 3917 b...")
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Gene Name

Os07g0498400

Description

Protein kinase-like domain containing protein

Version

NM_001066245.2 GI:297607263 GeneID:4343304

Length

3917 bp

Definition

Oryza sativa Japonica Group Os07g0498400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19348550..19352466

Sequence Coding Region

19348550..19348905,19348995..19352466

Expression

GEO Profiles:Os07g0498400

Genome Context

<gbrowseImage1> name=NC_008400:19348550..19352466 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19348550..19352466 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcgcggcggcgattcttcccggcgtgggtggtggtagtaatggtggtggtggtggttcttggttcttgctcggcggcggcggcggcgggggatggtgatgcgctgatggatgtgaagaatgcgttcgtggaggatcccggcggcgttctggcgggatggggcggcggtggcggaaactcgtcggcgttctgttcttgggcgggggtggagtgcgacgcggcgggggcgagggtgaccgggctgaacctgtccggcgccgggctggccggggaggtccccggcgcggcgctggcgcggctggaccggctggaggtggtcgacctgtcttcgaacaggctcgccggcccggtgccggcggcgctcggggcgctcgggaggctcacggcgctgctgctctactccaaccgcctcgccggcgagctcccgccgtcgctgggcgcgctcgccgcgctccgggtgctccgcgtcggcgacaacccggcgctgtcgggccccatccccgccgcgctcggcgtgctcgccaacctcaccgtgctcgccgccgcgtcgtgcaacctcaccggcgccatcccgaggagcctcgggaggctcgcggcgctcacggcgctgaacctgcaggagaactccctgtccgggccgataccgccggagctcggcggcatcgccgggctcgaggtgctctcgctcgccgacaaccagctcaccggcgtgatcccgccggagctcgggaggctcgccgcgctccagaagctgaacctggcgaacaacacgctggagggcgccgtgccgccggagctcgggaagctcggcgagctcgcgtacctcaacctcatgaacaaccgcctctccgggcgagtcccgcgcgagctcgccgcgctctcccgcgcgcgcaccatcgacctgtccggcaacctgctcaccggcgaactccccgccgaggtcggccagctgccggagctcagcttcctcgcgctctccggcaaccaccttaccggccgcatccctggcgacctgtgcggcggcggcggcggtggagcagagtccacgagcctcgagcacctaatgctctcgacgaacaacttctccggcgagataccgggggggctctcgcggtgccgggcgctgacgcagctcgacctggcgaacaacagcctcaccggcgtgatcccggcggcgctcggcgagctcggcaacctgacggacctgctgctcaacaacaacaccctctccggcgagctcccgccggagctcttcaacctcaccgagctcaaggtcctcgcattgtatcacaatgggctcaccggccggctgccggacgccgtcggccgcctcgtgaacctcgaggtgctcttcctgtacgagaacgacttctccggcgagataccggagacgatcggggagtgctcgagcttgcagatggttgatttcttcgggaaccggttcaacggcagcttgccggcgtccatcgggaagctctccgagctggcgttcctccatctccggcagaacgagctgtccggccggatcccgccggagctcggcgactgcgtgaacctcgccgtcctcgacctagccgacaacgcgctctccggcgagatcccggcgacgttcgggaggctccggtcgctggagcagctcatgctgtacaacaactcgctcgccggcgacgtccccgacggcatgttcgagtgccggaacatcacccgcgtcaacatcgcgcacaaccggctcgccggcggcctcctgccgctctgcggctcggcgaggctcctgtcgttcgacgccaccaacaactccttctccggcggcatcccggcgcagctcggccggtcgcggtcgctccagcgcgtccgcttcgggagcaacgcgctgtccggcccgatcccggcggcgctcggcaacgccgccgcgctgacgatgctcgacgcgtcggggaacgcgctcaccggcggcatcccggacgcgctcgcgcggtgcgcgcggctcagccacatcgccctcagcggcaaccggctgtccggccccgtgccggcgtgggtcggcgcgctgccggagctcggcgagctggcgctctccggcaacgagctcaccgggccggtgcccgtccagctcagcaactgctccaagctcatcaagctctcgctcgacggcaaccagatcaatggaacagtgccatcggagatcggcagcttggtctcgctcaacgtgctcaacctggccggcaaccagctctccggcgagattccggctaccctcgcgaagctgatcaacctgtacgagctgaacctgtcgcggaatctcttgtccggcccgatccctcccgacattggccagctgcaagagctgcagagcttgctggatttgagcagcaacgatctcagcggcagcatcccggcgtcgctcgggtcgctctccaagctggagagcttgaatctctcccacaacgcgctcgccggagctgtgccgccgcagctcgccgggatgagcagcttggtgcagctggatttgtccagcaaccagctgcaggggaggctggggagcgagttctcgcggtggccgcgtggcgcgttcgccggcaacgcgcggctctgcggccacccgctggtgagctgcggcgtcggcggcggcggccggtcggcgctgcggtcggcgacgatcgcgctggtgtcggcggcggtgacgctgtcggtggtgctgctggtgatcgtgctcgtgctgatcgcggtgcggcggcggcggtccggggaggtgaactgcacggcgttctcgtcgagcctcggcggtggcggcaacaacacgaacgggcggcagctggtggtgaaggggtcggcgcggcgggagttccggtgggaggcgatcatggaggcgacggcgaacctgagcgaccagttcgccatcggctccggcgggtccgggacggtgtaccgggccgagctccccaccggcgagacggtggccgtgaagcggatcgcgcacatggacagcgacatgctcctccacgacaagagcttcgcgagggaggtcaagatcctcggccgcgtccgccaccgccacctcgtcaagctcctcggcttcgtcgccagccacgacgtcggcggcggcggcggcggcggcggcagcatgctcgtctacgagtacatggagaacggcagcctgtacgactggctacacggcatcgccgccggtggcggcggcggcggcgacggcgagcgcaagaagcgcgtgctgagctgggacgcgcggctgaaggtcgccgccgggctggcgcagggcgtcgagtacctccaccacgactgcgtcccccgcgtcgtccaccgcgacattaagtccagcaacgtcctcctcgacggcgacatggaggcgcacctcggcgacttcggcctcgccaagtccgtcgccgacaaccgcaaggacttcaccgactccgcctcctgcttcgccggctcctacggctacatggccccagagtgcggatacagcttgaagacgacggagaagagcgacgtgtacagcatggggatcgtgatgatggagctggtgaccgggctgacgccgacggacaaggcgttcggcggcgacgtggacatggtgcggtgggtgcagtcgagggtggaggcgccgtcgccggggcgggagcaggtgttcgacccggcgctgaagccgctggcgccgcgggaggagtcgtcgatgacggaggtgctggaggtggcgctccggtgcacgaggacggcgccgggggagaggcccacggcgaggcaggtgtccgacctgctgctccacgtctcgctcgattactatcgagccggcgagcacaagcgctag</cdnaseq>

Protein Sequence

<aaseq>MMARRRFFPAWVVVVMVVVVVLGSCSAAAAAGDGDALMDVKNAF VEDPGGVLAGWGGGGGNSSAFCSWAGVECDAAGARVTGLNLSGAGLAGEVPGAALARL DRLEVVDLSSNRLAGPVPAALGALGRLTALLLYSNRLAGELPPSLGALAALRVLRVGD NPALSGPIPAALGVLANLTVLAAASCNLTGAIPRSLGRLAALTALNLQENSLSGPIPP ELGGIAGLEVLSLADNQLTGVIPPELGRLAALQKLNLANNTLEGAVPPELGKLGELAY LNLMNNRLSGRVPRELAALSRARTIDLSGNLLTGELPAEVGQLPELSFLALSGNHLTG RIPGDLCGGGGGGAESTSLEHLMLSTNNFSGEIPGGLSRCRALTQLDLANNSLTGVIP AALGELGNLTDLLLNNNTLSGELPPELFNLTELKVLALYHNGLTGRLPDAVGRLVNLE VLFLYENDFSGEIPETIGECSSLQMVDFFGNRFNGSLPASIGKLSELAFLHLRQNELS GRIPPELGDCVNLAVLDLADNALSGEIPATFGRLRSLEQLMLYNNSLAGDVPDGMFEC RNITRVNIAHNRLAGGLLPLCGSARLLSFDATNNSFSGGIPAQLGRSRSLQRVRFGSN ALSGPIPAALGNAAALTMLDASGNALTGGIPDALARCARLSHIALSGNRLSGPVPAWV GALPELGELALSGNELTGPVPVQLSNCSKLIKLSLDGNQINGTVPSEIGSLVSLNVLN LAGNQLSGEIPATLAKLINLYELNLSRNLLSGPIPPDIGQLQELQSLLDLSSNDLSGS IPASLGSLSKLESLNLSHNALAGAVPPQLAGMSSLVQLDLSSNQLQGRLGSEFSRWPR GAFAGNARLCGHPLVSCGVGGGGRSALRSATIALVSAAVTLSVVLLVIVLVLIAVRRR RSGEVNCTAFSSSLGGGGNNTNGRQLVVKGSARREFRWEAIMEATANLSDQFAIGSGG SGTVYRAELPTGETVAVKRIAHMDSDMLLHDKSFAREVKILGRVRHRHLVKLLGFVAS HDVGGGGGGGGSMLVYEYMENGSLYDWLHGIAAGGGGGGDGERKKRVLSWDARLKVAA GLAQGVEYLHHDCVPRVVHRDIKSSNVLLDGDMEAHLGDFGLAKSVADNRKDFTDSAS CFAGSYGYMAPECGYSLKTTEKSDVYSMGIVMMELVTGLTPTDKAFGGDVDMVRWVQS RVEAPSPGREQVFDPALKPLAPREESSMTEVLEVALRCTRTAPGERPTARQVSDLLLH VSLDYYRAGEHKR</aaseq>

Gene Sequence

<dnaseqindica>3562..3917#1..3472#atgatggcgcggcggcgattcttcccggcgtgggtggtggtagtaatggtggtggtggtggttcttggttcttgctcggcggcggcggcggcgggggatggtgatgcgctgatggatgtgaagaatgcgttcgtggaggatcccggcggcgttctggcgggatggggcggcggtggcggaaactcgtcggcgttctgttcttgggcgggggtggagtgcgacgcggcgggggcgagggtgaccgggctgaacctgtccggcgccgggctggccggggaggtccccggcgcggcgctggcgcggctggaccggctggaggtggtcgacctgtcttcgaacaggctcgccggcccggtgccggcggcgctcggggcgctcgggaggctcacggcgctgctgctctactccaaccgcctcgccggcgagctcccgccgtcgctgggcgcgctcgccgcgctccgggtgctccgcgtcggcgacaacccggcgctgtcgggccccatccccgccgcgctcggcgtgctcgccaacctcaccgtgctcgccgccgcgtcgtgcaacctcaccggcgccatcccgaggagcctcgggaggctcgcggcgctcacggcgctgaacctgcaggagaactccctgtccgggccgataccgccggagctcggcggcatcgccgggctcgaggtgctctcgctcgccgacaaccagctcaccggcgtgatcccgccggagctcgggaggctcgccgcgctccagaagctgaacctggcgaacaacacgctggagggcgccgtgccgccggagctcgggaagctcggcgagctcgcgtacctcaacctcatgaacaaccgcctctccgggcgagtcccgcgcgagctcgccgcgctctcccgcgcgcgcaccatcgacctgtccggcaacctgctcaccggcgaactccccgccgaggtcggccagctgccggagctcagcttcctcgcgctctccggcaaccaccttaccggccgcatccctggcgacctgtgcggcggcggcggcggtggagcagagtccacgagcctcgagcacctaatgctctcgacgaacaacttctccggcgagataccgggggggctctcgcggtgccgggcgctgacgcagctcgacctggcgaacaacagcctcaccggcgtgatcccggcggcgctcggcgagctcggcaacctgacggacctgctgctcaacaacaacaccctctccggcgagctcccgccggagctcttcaacctcaccgagctcaaggtcctcgcattgtatcacaatgggctcaccggccggctgccggacgccgtcggccgcctcgtgaacctcgaggtgctcttcctgtacgagaacgacttctccggcgagataccggagacgatcggggagtgctcgagcttgcagatggttgatttcttcgggaaccggttcaacggcagcttgccggcgtccatcgggaagctctccgagctggcgttcctccatctccggcagaacgagctgtccggccggatcccgccggagctcggcgactgcgtgaacctcgccgtcctcgacctagccgacaacgcgctctccggcgagatcccggcgacgttcgggaggctccggtcgctggagcagctcatgctgtacaacaactcgctcgccggcgacgtccccgacggcatgttcgagtgccggaacatcacccgcgtcaacatcgcgcacaaccggctcgccggcggcctcctgccgctctgcggctcggcgaggctcctgtcgttcgacgccaccaacaactccttctccggcggcatcccggcgcagctcggccggtcgcggtcgctccagcgcgtccgcttcgggagcaacgcgctgtccggcccgatcccggcggcgctcggcaacgccgccgcgctgacgatgctcgacgcgtcggggaacgcgctcaccggcggcatcccggacgcgctcgcgcggtgcgcgcggctcagccacatcgccctcagcggcaaccggctgtccggccccgtgccggcgtgggtcggcgcgctgccggagctcggcgagctggcgctctccggcaacgagctcaccgggccggtgcccgtccagctcagcaactgctccaagctcatcaagctctcgctcgacggcaaccagatcaatggaacagtgccatcggagatcggcagcttggtctcgctcaacgtgctcaacctggccggcaaccagctctccggcgagattccggctaccctcgcgaagctgatcaacctgtacgagctgaacctgtcgcggaatctcttgtccggcccgatccctcccgacattggccagctgcaagagctgcagagcttgctggatttgagcagcaacgatctcagcggcagcatcccggcgtcgctcgggtcgctctccaagctggagagcttgaatctctcccacaacgcgctcgccggagctgtgccgccgcagctcgccgggatgagcagcttggtgcagctggatttgtccagcaaccagctgcaggggaggctggggagcgagttctcgcggtggccgcgtggcgcgttcgccggcaacgcgcggctctgcggccacccgctggtgagctgcggcgtcggcggcggcggccggtcggcgctgcggtcggcgacgatcgcgctggtgtcggcggcggtgacgctgtcggtggtgctgctggtgatcgtgctcgtgctgatcgcggtgcggcggcggcggtccggggaggtgaactgcacggcgttctcgtcgagcctcggcggtggcggcaacaacacgaacgggcggcagctggtggtgaaggggtcggcgcggcgggagttccggtgggaggcgatcatggaggcgacggcgaacctgagcgaccagttcgccatcggctccggcgggtccgggacggtgtaccgggccgagctccccaccggcgagacggtggccgtgaagcggatcgcgcacatggacagcgacatgctcctccacgacaagagcttcgcgagggaggtcaagatcctcggccgcgtccgccaccgccacctcgtcaagctcctcggcttcgtcgccagccacgacgtcggcggcggcggcggcggcggcggcagcatgctcgtctacgagtacatggagaacggcagcctgtacgactggctacacggcatcgccgccggtggcggcggcggcggcgacggcgagcgcaagaagcgcgtgctgagctgggacgcgcggctgaaggtcgccgccgggctggcgcagggcgtcgagtacctccaccacgactgcgtcccccgcgtcgtccaccgcgacattaagtccagcaacgtcctcctcgacggcgacatggaggcgcacctcggcgacttcggcctcgccaagtccgtcgccgacaaccgcaaggacttcaccgactccgcctcctgcttcgccggctcctacggctacatggccccaggtaaaaaccaaacttccgttgtgtcaattgctcgccaccatgtccatgtcgcggacgccattgatgggcatcttggatcttgcgcgcagagtgcggatacagcttgaagacgacggagaagagcgacgtgtacagcatggggatcgtgatgatggagctggtgaccgggctgacgccgacggacaaggcgttcggcggcgacgtggacatggtgcggtgggtgcagtcgagggtggaggcgccgtcgccggggcgggagcaggtgttcgacccggcgctgaagccgctggcgccgcgggaggagtcgtcgatgacggaggtgctggaggtggcgctccggtgcacgaggacggcgccgggggagaggcccacggcgaggcaggtgtccgacctgctgctccacgtctcgctcgattactatcgagccggcgagcacaagcgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0498400, RefSeq:Os07g0498400