BGIOSGA011737

From RiceWiki
Revision as of 15:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011737

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011737, complete gene.

LocusTag

OS03G0120800

Ensembl Transcript ID

BGIOSGA011737-TA

Ensembl Protein ID

BGIOSGA011737-PA

Length

5822

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1361013..1366834

Sequence Coding Region

1361013..1361196,1361774..1362690,1363533..1363695,1363784..1364613,1366742..1366834

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1361013..1366834 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1361013..1366834 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTGGCCCTCCGCCGCGCCTCTTTTCGCCGTCGATCGTCACCGCCTCGCTGAACATTACCCCAATTCCACAGCCCTAGACCCCCTAGCCCGTGGCCCGACTTCCCCACCGCCCCATCGTACTACTCGTCTTCGGCGCAACCTCCGGCGAGCTCCATGCACCCCGTTATCGCGGAGACGGGGTACTGCAAATACCGATGGATTTCTGTTTAGCGATAGTGCACTACACAATGTATACCCGGAGGATCAATTTAGTTCCATCAAGCAGCTGCATCCCTGGATTCCCTCAACAACAGGAAGATCAAGCTGGCTGGAAGAGAAAATTCCAGTAATTCACCAAAGAACTTCAGCAGCTGCATCCAGTGATATTGGATCATCAGTTCTCCATAAGCCTTCTTTGTTTCCCAGCATTATTGATTGCTTCGACAAAGAACCTGTTCCCATACATCAATCTGATGGCCGTTATTCTTATGATAGCCACCTATCACATCTTACGTCCTGCTCAACATCTTTGAATTATGGCCTATCCATGCCATCTGTTGCTGCCTCACCTGTAGTATGTGGCATGAAAAGAATAGATCCGTCACCAAGTGATCCTGTTTTGAAGGGTCGATTCCTGCAATATGCAAACCCATGTAGGTTTAATATTGGTCATTTTGATAGCGTGCAGGATGAGCAGAAAGATCATGCTGGCTTTCAGACTGCGTATAGACATTGCAGCGACTGGAACAGATGTACTAACGATACGGGAATAGTGGGAAACTATTTAGCTAATAGTTCTGGCGAGACTTGTAATGTTGGTGAGAATTCTATAACTGGAAGGTTTTCACAGGAAATTCTGTGTTCTGAAGTGCCTATGAGCAGAGTTCAGGAACCTTTATCTCATCATCACTCACTTGTTCAGGAGGACCTGAATGCATTTTGTGAGAACATCACCTACAGATGTAACTATCATGCAGAGTTAATCAAGTCAATGTACAATTTGTCAGTAGCGCTTATATCTAGTTGCAATGGTGATTATGAGTTGGACGAATCTTATCAAGAACTTATTCAATCTGCCATACAAAATCTCAGTTCTCTGAGTCCAAAAAGAAGCAAGAATCTATCTATAGAGGAAAATAAGTCTGGCAATGATAAAGATGCACATGTGCTGGCATATAAGAATCTGTGGATCGAAGCAGAAGCTTCCATGTGTAAACTCAAGTATGAACTTCAACTTGCCCGTATGGAACTTGCACTGAAATATCACAGTCAACAATCAGGTGCACCTCCTACTATTCCATTAGATGTCCAAGATTCTAGCTTGTCCAAATCCAAGAGCTTGTTATGTGATGAAGTGCTTGATGATCCTAGCAAACAACAAAACCATGTGAAAGAAAACACTATCTGTAGTGCAACCTTGCTATCTGAGGAAGGTAATACTGGCGATGGACAATCTCCTAAAGTAAATAGAAGCATTGCAAATGAAGTTGAGGCTGGTGTCTTTACTCAATTGAGAGTTTTGAGATCCCGTGGTGATAGTATATGTTCCTTTGGCGAGGGAAGTGATGAGGAGCAGCAGGAAACAAGTAATAACAAAAAAACAAATGGTTTTGATAATACTGCTGCAGTTAGTATGGATACTTTGAAGTCTGGTGATGATAGCATGAACTCTGTAGTGGTAGAACCTATCAAAGAGCGGGTGGAATCAAGTAAAACTGATGTTGATACTGCTGCACCTTTCTATTCGTTTGTTAAACGTTTATCGGGCTCTTCAAGCTCATCGGATGTGGACTTTGACAAGTTTCTATCTAGTATTAAAAAGCAAACTGATGTTACTGTTATGGCTAGGCACAAAGATTTCGTGTGCGATAAGGGTAATATAAGATCATTAGATGACACCACTAATCAATGCCAAGCAGCAAGTAATACGAAGCAGCTCGAAGATGATGCTTTAAGGTTTTTCCAATCCTTGAAAATTCCGGAGGGGATACCAGAAGATCATTCAGACGATGGGTCATCAGACTCAGATTATTATCAAACAGAACATTATCCATTACGGGTTGAACCAGGAAGACTTCTCTTCATCCATAAAGTCCTTGGAAGTGGAAAGATACGTGGGTCCAATGATGTCGACTGTAGTTTCGATCAGCTTGATAAGGTGTGCCATTTGAAGCCATCTCCCTCAACTCAACGTGCCCACTAA</cdnaseq>

Protein Sequence

<aaseq>MSWPSAAPLFAVDRHRLAEHYPNSTALDPLARGPTSPPPHRTTRLRRNLRRAPCTPLSRRRGTANTDGFLFSDSALHNVYPEDQFSSIKQLHPWIPSTTGRSSWLEEKIPVIHQRTSAAASSDIGSSVLHKPSLFPSIIDCFDKEPVPIHQSDGRYSYDSHLSHLTSCSTSLNYGLSMPSVAASPVVCGMKRIDPSPSDPVLKGRFLQYANPCRFNIGHFDSVQDEQKDHAGFQTAYRHCSDWNRCTNDTGIVGNYLANSSGETCNVGENSITGRFSQEILCSEVPMSRVQEPLSHHHSLVQEDLNAFCENITYRCNYHAELIKSMYNLSVALISSCNGDYELDESYQELIQSAIQNLSSLSPKRSKNLSIEENKSGNDKDAHVLAYKNLWIEAEASMCKLKYELQLARMELALKYHSQQSGAPPTIPLDVQDSSLSKSKSLLCDEVLDDPSKQQNHVKENTICSATLLSEEGNTGDGQSPKVNRSIANEVEAGVFTQLRVLRSRGDSICSFGEGSDEEQQETSNNKKTNGFDNTAAVSMDTLKSGDDSMNSVVVEPIKERVESSKTDVDTAAPFYSFVKRLSGSSSSSDVDFDKFLSSIKKQTDVTVMARHKDFVCDKGNIRSLDDTTNQCQAASNTKQLEDDALRFFQSLKIPEGIPEDHSDDGSSDSDYYQTEHYPLRVEPGRLLFIHKVLGSGKIRGSNDVDCSFDQLDKVCHLKPSPSTQRAH</aaseq>

Gene Sequence

<dnaseqindica>1..184#762..1678#2521..2683#2772..3601#5730..5822#ATGTCCTGGCCCTCCGCCGCGCCTCTTTTCGCCGTCGATCGTCACCGCCTCGCTGAACATTACCCCAATTCCACAGCCCTAGACCCCCTAGCCCGTGGCCCGACTTCCCCACCGCCCCATCGTACTACTCGTCTTCGGCGCAACCTCCGGCGAGCTCCATGCACCCCGTTATCGCGGAGACGGGGTATGCAGGTGAGCTAGCTTGCGCTCCTCCCGTGATTAGGGCCTGTATCTGTACGTGCTGCGTGATTAATTTGGTTTCTGGGTGTTGTGGTAGTGGTGAGTGGTGACAGTTCATGAATGCATCTTACACTGGTTTAATTTACGCGTTACGCTGTGTATTTGATTTATAAGAGGTAGATTTAGGGTGTGCAGTCATACTAACTGGAATTTTGTGTGCGGTCGAGGACAATCGTAATTACTGGTGGGTAGTTAACTATGCGATTTACTTCTAAAAATACTACATTAAGATTTTTTTTACTTCTAAAAGTATGTGATCATCTTAGATAAAGATTTTGTTTAGTGCATGGAGTCTCACCGTATGTGACATTAAAGTTGTACATATAGAGACATCTGATTGTTCACTTGTTGTTACTGATGCTTGGTGGTTTCAGCGTCACAGATGATTTGACGGTGGCAAGAGGACTACTATTTCTCTTGTTGCTATCTTCGTGTGTAAATATAAACATCAAGAAATTGTCACCAAGGCTTTGACAAAAATTTCATTGTATACAACTGACACAAACCAAATTAATTTGCAGGTACTGCAAATACCGATGGATTTCTGTTTAGCGATAGTGCACTACACAATGTATACCCGGAGGATCAATTTAGTTCCATCAAGCAGCTGCATCCCTGGATTCCCTCAACAACAGGAAGATCAAGCTGGCTGGAAGAGAAAATTCCAGTAATTCACCAAAGAACTTCAGCAGCTGCATCCAGTGATATTGGATCATCAGTTCTCCATAAGCCTTCTTTGTTTCCCAGCATTATTGATTGCTTCGACAAAGAACCTGTTCCCATACATCAATCTGATGGCCGTTATTCTTATGATAGCCACCTATCACATCTTACGTCCTGCTCAACATCTTTGAATTATGGCCTATCCATGCCATCTGTTGCTGCCTCACCTGTAGTATGTGGCATGAAAAGAATAGATCCGTCACCAAGTGATCCTGTTTTGAAGGGTCGATTCCTGCAATATGCAAACCCATGTAGGTTTAATATTGGTCATTTTGATAGCGTGCAGGATGAGCAGAAAGATCATGCTGGCTTTCAGACTGCGTATAGACATTGCAGCGACTGGAACAGATGTACTAACGATACGGGAATAGTGGGAAACTATTTAGCTAATAGTTCTGGCGAGACTTGTAATGTTGGTGAGAATTCTATAACTGGAAGGTTTTCACAGGAAATTCTGTGTTCTGAAGTGCCTATGAGCAGAGTTCAGGAACCTTTATCTCATCATCACTCACTTGTTCAGGAGGACCTGAATGCATTTTGTGAGAACATCACCTACAGATGTAACTATCATGCAGAGTTAATCAAGTCAATGTACAATTTGTCAGTAGCGCTTATATCTAGTTGCAATGGTGATTATGAGTTGGACGAATCTTATCAAGAACTTATTCAATCTGCCATACAAAATCTCAGTTCTCTGAGTCCAAAAAGAAGCAAGGTGTGATGCAGACTCTTTCTTACACATTTCATTTTTTTCATGTTTTGAGAAAAAAACATATATTTTATTTAATTTTTGAACATTACCTCACCCATACTGATTATAATTATATTTTTCATGAGTACTGATTGCTTAACTTAAAATCAATAGAAGTTTTGGAACTTGTATTTAACAGCTATGCTTCATATCACATCTGTGTTGAACGTTTTTCGTTTATAGCTTTTACCTTGTACATGGTTTTTGAAATTGTGATGGTTTTATCCTCACTTCAATTTTCTTCTGAAGGTGCTAAAAATAGCTACACTTATATTGCGTTGTCATGGTGGATAAATGATAGGTCATTCACAATGACTGATATTCCATTTTAAGCTTAACATGATCCCTGTATTATCTGAAGAAAATTAATGCCTAGCACACTGTGTTGACTTCCATTTCTAATAATAACTCTGCCAAAGGACTTTTGGAATTATGCTCACTGAAAATGCTAATCTGCTAAACAAAAGTTTGGTGGTATCTCTACTCAACAATGAAAATCAAATTATTTCTTGTGTCATTTAAGCTTATGCTATGTCTCATGCAAGGGTCTATTAAACGATGATCATGTCAATATTAACTACCTTCAATCAAAACTGGAAAAGATAAATTGTGATGGAAATACTTGCCAGGCTCAAAAGTTTGTTGAACCTGTTCTGTCAGATATTATCACAGATTTCAAAACATCTATTTTACAGATATTGATTTATATTATATCCTGGATTGACTTCAAAATATTGTTGCGATCTGCTTAGTGTGGACAATAGTGATTTTCTTCTCAGAGATGTGCTTTACTCCCTTGTTTGCAGAATCTATCTATAGAGGAAAATAAGTCTGGCAATGATAAAGATGCACATGTGCTGGCATATAAGAATCTGTGGATCGAAGCAGAAGCTTCCATGTGTAAACTCAAGTATGAACTTCAACTTGCCCGTATGGAACTTGCACTGAAATATCACAGTCAACAATCAGGTCAGTATATTTTGCATGTCTATTAAGGCTTGATTTATATCAACAATTTTTAGCATCTCCTTACTTTGGAAGTTAAATAATCTTGAAGGTGCACCTCCTACTATTCCATTAGATGTCCAAGATTCTAGCTTGTCCAAATCCAAGAGCTTGTTATGTGATGAAGTGCTTGATGATCCTAGCAAACAACAAAACCATGTGAAAGAAAACACTATCTGTAGTGCAACCTTGCTATCTGAGGAAGGTAATACTGGCGATGGACAATCTCCTAAAGTAAATAGAAGCATTGCAAATGAAGTTGAGGCTGGTGTCTTTACTCAATTGAGAGTTTTGAGATCCCGTGGTGATAGTATATGTTCCTTTGGCGAGGGAAGTGATGAGGAGCAGCAGGAAACAAGTAATAACAAAAAAACAAATGGTTTTGATAATACTGCTGCAGTTAGTATGGATACTTTGAAGTCTGGTGATGATAGCATGAACTCTGTAGTGGTAGAACCTATCAAAGAGCGGGTGGAATCAAGTAAAACTGATGTTGATACTGCTGCACCTTTCTATTCGTTTGTTAAACGTTTATCGGGCTCTTCAAGCTCATCGGATGTGGACTTTGACAAGTTTCTATCTAGTATTAAAAAGCAAACTGATGTTACTGTTATGGCTAGGCACAAAGATTTCGTGTGCGATAAGGGTAATATAAGATCATTAGATGACACCACTAATCAATGCCAAGCAGCAAGTAATACGAAGCAGCTCGAAGATGATGCTTTAAGGTTTTTCCAATCCTTGAAAATTCCGGAGGGGATACCAGAAGATCATTCAGACGATGGGTCATCAGACTCAGATTATTATCAAACAGAACATTATCCATTACGGGTTGAACCAGGAAGACTTCTCTTCATCCATAAAGTCCTTGGAAGTGGAAAGGTAACTACAGCTTAAGTTCATACTGTATATATGTTCCAAATCTTAAATATGTCTACGTATGCAGGAATGGTGACATAATTTGCAGGATCAACCGTCGGGGTTGGTCACTTGAACTGAACTTCAACAACTCGTGCTACTTATGAGCTTCTGTGTAAATGTGATGTGTGCCCTATTGATTCTTATAATTGAAACAATTGCACATGTACTTTTTAAACAATTGCACATGTACTTTTTAGTAGTTTCATATTTAATCTCTTTTGAGCTTTTTAGTAGTTCCATGATTTGTGTACTGTTATATACTACCTCCGTTTTTTAATATATGACGCCGTTAACTTTTTGACCAACGTTTGACTATTCGTCTTATTCAAAATTAAATTTTTTGTGCAAATATAAAAATATTTATGTTATGCTTAAAGAACATTTGATGATAAATCAAGTCACAATAAAATAAATAATAATTACATAAAGTTTTTGAATAAGACGAATGATCAAACGTATCTCAAAAAGTCAACGACGTCATATATTAAAAAAACGGAGGAAGTAGTTTTTCTTTCACTTGTGACACCCTAATGCCCCTTTTCTAGCTGGCTGCGAGGATTTTGAACCTTTTTGTTCTTTGATGTCAGGTATGGGAGTGATGCCCTGATTTACCAACCTACTCCTATGCATATTTTCTTCTCTTTTACTTTTAGGATATGATGGATAACGAATCAACCGACCGTTACAAATGGGTCTTCATTTATACTAGTTATTACTTCCTCTATTTTGCAATGCAAGACTTTCTAGCATTATCCACATTCATATAGACGTTAATGAATCTACACATATATGTGTGCTTAGATTCATTAATATCTTTATGAATGTAGACAATGCTAGAAAGTCTTACATTATGAAACGGAGGGAGTACATCTACAACCAACTTTTCTTTTCTTTTGCGCCTAGCTAATATTTGCAGGGGCAAGCATAATCAGATAGCAACAGAAGCCAAGAGGAACGCTGCATTCTTCATATTTTTCAGAATTGTCCGAGTAGGGCCAGCTGTGCAATTACACTTCTTGTTGACAGATCTGCTGGTACGGAATAGATTGGCTTACACAGATCTCGGATCCAATGCATGTGCTATTAATTAAGCAAGTTAAGAACTGTAACCTCACCAGGATTCAGGATCAGAGAGATTAAGGACACAACCTGGAGGCTGGAGGTATGGTTTATTCTCTCTCTATCTCTCCTCTTTTTAGAGGTTGGAGGTACAATACAATTCAGCGGCAATCTAGTAGAGATTGAGGTATAGTAGAGTTCCACATCATTTAGTATTCAACCTCTTCTCTAATATCCAAGCCAGGGGTCCAGGACATCTGTACTGTTTGCAATGTAGCTAGAGGAAATCTTTAATGGAGCTAATAGCACCGGCCACCAGCCAAGGATCTGGTTGGTGTGAGCCTATCAGCTCAACATGGGCTAGAACACAGATTTTTAGTCGATTTGTATGCTGGGAAGACCTCCTGAATTTTTCAACCTCATCGTCCAGGATGCCTTCTGAATTTTTCAAGCTGCATTGTAACAGTCTGTTTACTGTTTACCACTCCAATTGGCAGGAAGAAGCAATTCATGCAAGAAAAGAGGGGAGATGTTGCATACAATGTGTACCAGGGGAAAAAAAGGAGAGTACGACTTTTACATGGATGTTGTCTTTTTTCATTTCCTGTGGAAGCAGAAGCAAACCGATGCAATTGAGTTGGAGTAAGCCGATGGTTGTGACAGCTGATCTCTACTCCCTCCGTTCCATAATGTAGCAACTTAGGATGGGTCGGACTACGAATCTGGATATGCCTCATGTCCAGATTCGTAGTCCTAAGATGGGTCTCATTCTATCCTAGGTTGCTACATTGTAGGACGGAGGGAGTATCTGTTTAGGACAGTACTGATCCCTCATTGCCATTTCCTTTTTTTCCCCCTTTTAACATGACCCAGTTGCAGGGGCTACATACAGCAGGAGCAACAGCAATGTCAGATTTGCTCCCCTGCCGTGACACAATTCTGATCAAGTGGAGAAAACTTGCATAGTGAAAGGGAGAGGTCAGAGGTGGAACTGTGGCTGTGGGTGTGGCTGGTATTTGATCTGCCGCAGATACGTGGGTCCAATGATGTCGACTGTAGTTTCGATCAGCTTGATAAGGTGTGCCATTTGAAGCCATCTCCCTCAACTCAACGTGCCCACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011737