BGIOSGA011801

From RiceWiki
Revision as of 15:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011801

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011801, complete gene.

LocusTag

OsI_09911

Ensembl Transcript ID

BGIOSGA011801-TA

Ensembl Protein ID

BGIOSGA011801-PA

Length

2930

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2334450..2337379

Sequence Coding Region

2334450..2334869,2335340..2335492,2336035..2336340,2336942..2337379

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2334450..2337379 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2334450..2337379 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCTCCCCCAAGAAGAAGGAGAAGAAGCACTCCAAGAAGCAGGAAGACACCAATGTCCCCGAGAAGAAGCGGGAAGTCGTCCATGTCACCGTGGACGCCTCCCTCACCGGCGCCGCCGCCGCGGGCGCAGCCCCCGTCGTCGCCTACTTCCCGACCGGCTACGACCCCCTGGCCGCCGGCGGCGGCAGGAAGGGTAGAGAGGCCCCCCGCACGAGGCTGTTCCGCCACACGAAGCACCCATCCCGCATCGAGCTCGTGGTCGGCGCCGCCACTGGTGGCGGCGGAGGGCCGGACTTCGTCGGGCGGAGCTACGCCGGCGAGGCCGTGCTGCCGCAGCTCACTGGCTACGCGCTCGGTGTCCTCGACAAGGCCTCCGGCACCCTCAAGGTCGTCCCCATCGCCGCCAACAAGATTCTTAGGCTAGAGCCGCACCTTGAAGTGCAGAAACTGGCGCATTCGCAGCACTCTGGGGCAGTAGGGGAGGCAGTATCATCAGCAGGAGATGCTGACTTGAAGGTACAGGATATTACCAAGGCGTTTGGAACCCAGAAAGACAAGGCCAAGGATATTAAGTGGCAGTCATTAAATGAACAAAGGAATGATCCTTCTGCTTTTATGGACCTTGACCTTGGGAATGCTGATACCAGTGTGGGTGCTAATGAAAGTCAAGAACCAACTGTACGGAACATTCCACCTTATGATCCTGCAGCAGATACATCAGAAAGAGCATATCTTTTTGATGAGATTATTCCAAAGAGTATAAGGCCGCACCTTGTGGATATTATAGGACATTTTGAGTCAGGAGAAATTTCTTCAAAAGGCTATGGGAGTTTTGTGTCAAATCGTGTTAATAAATTACAGGAGCTTCAGGGTGAAGATAAGGAGAGGCTTGCTTGGATACTGTCCTACATCACACATCTCCTGTCCCTGCTGGCACGGAACAGCTCCATGTCCAAGCGGCACAGAAAGGAAAACCAGGCTACCAGTGGACCAGTGATCCCACAGTATGTATATCGTAAGATGGTGCTAATGTTTACGGAACCAGGATCTAGCGCCTTGTCAACAGAGAAACACGAGCTTCTGATCAACTACATTCTCGTACTCACGCTCTACGCTGATGACTTCAGATCCGACCCTAAGGATATATGTGAAGACCTGAAAATGACCCGCCAGATGATTAAACCATATTATGACCAGCTGGGATGCAAATCTTCGTCGGCCGGTGCATTTAAATCCTCTGTAATGACACTTCCAGCTCCCCTCAAGTTCCCAAAAGAAGCTACAAGGAGAAAGCGACGAAGGTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAASPKKKEKKHSKKQEDTNVPEKKREVVHVTVDASLTGAAAAGAAPVVAYFPTGYDPLAAGGGRKGREAPRTRLFRHTKHPSRIELVVGAATGGGGGPDFVGRSYAGEAVLPQLTGYALGVLDKASGTLKVVPIAANKILRLEPHLEVQKLAHSQHSGAVGEAVSSAGDADLKVQDITKAFGTQKDKAKDIKWQSLNEQRNDPSAFMDLDLGNADTSVGANESQEPTVRNIPPYDPAADTSERAYLFDEIIPKSIRPHLVDIIGHFESGEISSKGYGSFVSNRVNKLQELQGEDKERLAWILSYITHLLSLLARNSSMSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHELLINYILVLTLYADDFRSDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAPLKFPKEATRRKRRRF</aaseq>

Gene Sequence

<dnaseqindica>1..420#891..1043#1586..1891#2493..2930#ATGGCCGCCGCCTCCCCCAAGAAGAAGGAGAAGAAGCACTCCAAGAAGCAGGAAGACACCAATGTCCCCGAGAAGAAGCGGGAAGTCGTCCATGTCACCGTGGACGCCTCCCTCACCGGCGCCGCCGCCGCGGGCGCAGCCCCCGTCGTCGCCTACTTCCCGACCGGCTACGACCCCCTGGCCGCCGGCGGCGGCAGGAAGGGTAGAGAGGCCCCCCGCACGAGGCTGTTCCGCCACACGAAGCACCCATCCCGCATCGAGCTCGTGGTCGGCGCCGCCACTGGTGGCGGCGGAGGGCCGGACTTCGTCGGGCGGAGCTACGCCGGCGAGGCCGTGCTGCCGCAGCTCACTGGCTACGCGCTCGGTGTCCTCGACAAGGCCTCCGGCACCCTCAAGGTCGTCCCCATCGCCGCCAACAAGGTGAGCACCATTCCATTTCCACCCAAGCTTTGATCCATCTGATAACTGTTGTCACTAATTGGAACAAAATGGGTGATAGGTCCTGTCACAGTATAGTGTTTTAAGCAGTTTTTGTTTTGATGACATGCTGGCTCCAATGGGCAAGAAATGTGTTAGTGTTGAGTAGAAATTGTTGTTCTACTTGTGACATTACATACAGCGGCGCAATTGAGTGGCAATTGAACAATGGACTTGAGCACTGTAGCTGTGAAGCTGCTAGCTCTTTCCTTGGTGTTACCAATTCCAATGATGTGGCATAATGATATATATTAAGATAGTTTATGAAGTTTGAGTACTTGCTAAGGAAATATAGATTTGTTGGTTTACCATTGTGATTAATTAATTATTTGCATTTCAAAGTGAAGAACCTATGTTGTTCATACGGCATGAGGATATGTAATTTTGCTCTGGATATTTGTATTTGCTAACAGATTCTTAGGCTAGAGCCGCACCTTGAAGTGCAGAAACTGGCGCATTCGCAGCACTCTGGGGCAGTAGGGGAGGCAGTATCATCAGCAGGAGATGCTGACTTGAAGGTACAGGATATTACCAAGGCGTTTGGAACCCAGAAAGACAAGGCCAAGGTATGTTTATGCCCCGGGTTTACTATCTTTCTGTTTCCTATATTTGATAACGTGGTGTATAAAGTTGCATGCACGGTGCAGTTTAAACTCAAAAGTTGATTAGGTTTGTTATACTTTTTAAAGATAATATGTTTATAGGATAAAGGGTCTGGGCACATTTACAGATCAGAAGATTTTGCAGGCCCAGAAATTCAGATGATATACGACTTCTGGTAGATTAGTTTTGCACATCTAACCATCTAGAGAAATTTTGTTTCCCCCTTTTTTTCATGTAATAAAAGGAATGATTTTATGGATCTGTACACAGGTGGTTTAAAACTAAAATCTGTTTTTTTTTTGGACCGTGGATGCTTATACTGTTGCATTTTCTACATTACATACCCATACTTTTTTCATCAAGAGTTGCTTAACGGATACATCACCTCAATTTCTTCACTTTACACCCATCTTAAGTGCATAACGAAGCAGCAGACCATGACATGATTGTGCTTGCTTGTTTGGATACAGTCATGAGTTTGATTCATGCTATATATTCCTTGCAGGATATTAAGTGGCAGTCATTAAATGAACAAAGGAATGATCCTTCTGCTTTTATGGACCTTGACCTTGGGAATGCTGATACCAGTGTGGGTGCTAATGAAAGTCAAGAACCAACTGTACGGAACATTCCACCTTATGATCCTGCAGCAGATACATCAGAAAGAGCATATCTTTTTGATGAGATTATTCCAAAGAGTATAAGGCCGCACCTTGTGGATATTATAGGACATTTTGAGTCAGGAGAAATTTCTTCAAAAGGCTATGGGAGTTTTGTGTCAAATCGTGTTAATAAATTACAGGAGCTTCAGGTAAATACTGATGGTTTTCTTTTTATCTGGTTCTCCTGAATCTTTGTTTCATATTGAATTACCCCATGCATATACTAATAATCCACTTCTAGGAAAATTTAATGAGAAATGCTCCTGACTTTTGGTGGTTGTAGGTGTGTTAAATTGTAAACTCTTAAGAGTTGCTGATATAGTTTTAGGAGACAGTAATTTATTGTACACTAATCAAAGGAAAATAAGATTACTTTATGTTGTCAAGCACTCAAGCATACAGGGAAGTAGCTATTAATTGACTCGGATCTTCCTTTAGTCAGTGCAAAAAGAATTTATTTGCTGAAATATTGTAGTTGACAGTTACAGAGTTTTTGCTGTGATGTGAGCAAACTGTTTCTACCTAGAATTGGATGGCAGACACTCAATTGCAATGATGCCATGTAGAACAATCCTGATTTGCATGTTTTCCCCTCTTTATTAAGATATTTACTCAGATTGCTCTCGAGACAATGGCAGCCATCTGTTTAACTTATGTCATACTGAACTCAACTAAAAACTGTGTTTGTAGAGTTGTTTCTTTTATTCCATATGCTCTAAATGCAATATGTGTATGTTTTATATGCTTTAGGGTGAAGATAAGGAGAGGCTTGCTTGGATACTGTCCTACATCACACATCTCCTGTCCCTGCTGGCACGGAACAGCTCCATGTCCAAGCGGCACAGAAAGGAAAACCAGGCTACCAGTGGACCAGTGATCCCACAGTATGTATATCGTAAGATGGTGCTAATGTTTACGGAACCAGGATCTAGCGCCTTGTCAACAGAGAAACACGAGCTTCTGATCAACTACATTCTCGTACTCACGCTCTACGCTGATGACTTCAGATCCGACCCTAAGGATATATGTGAAGACCTGAAAATGACCCGCCAGATGATTAAACCATATTATGACCAGCTGGGATGCAAATCTTCGTCGGCCGGTGCATTTAAATCCTCTGTAATGACACTTCCAGCTCCCCTCAAGTTCCCAAAAGAAGCTACAAGGAGAAAGCGACGAAGGTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011801