Os07g0501500

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Revision as of 08:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0501500| Description = Similar to NBS-LRR type resistance protein (Fragment)| Version = NM_001188286.1 GI:297725702 GeneID:9266907| Length ...")
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Gene Name

Os07g0501500

Description

Similar to NBS-LRR type resistance protein (Fragment)

Version

NM_001188286.1 GI:297725702 GeneID:9266907

Length

8515 bp

Definition

Oryza sativa Japonica Group Os07g0501500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19556179..19564693

Sequence Coding Region

19556179..19558405,19561385..19561600,19564401..19564693

Expression

GEO Profiles:Os07g0501500

Genome Context

<gbrowseImage1> name=NC_008400:19556179..19564693 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19556179..19564693 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcaccttcgtcaagggcctcgacaatgaggcgtccgcctacatcgtcgacgaggcacgaggccgtcacaggtgcgtgtggaccagctcctgctccgtcgacatgatcggcacccgcaacggcctcatctgcgtcctggacggcgacacgggcgccgtcacggtggccaacccagcgacgcgcgtcgcagtccatgccgccgccgccgtgacaggcgtggctcttgccgtgctccccagacgcgtgcacgtcccgtgctacttcaacaagtctggcacgttcgatgccatgtacccattgtggattcgtcccaccgcaaaacttgtcacgacctttacaacacaggcacacattcgacacaagctgtctaggaaaataaaagcaatcaattcaaggcttgaggacatcattgaaaacaaacataaatacaagatcgaggaggcaaacacgaagacaactaggacatggaaagcttctacatcaatatcttacacccataaaaaattggaatatttgcatgagtcagacgtgccgattcatgtggaagagcgaaaaaaactagagaaagtccttcttactacacctgaagatctacatggcaaagaacacaatccagtcataatctctgtgtttggaaaaagtggtgttggcaagacaactcttgtgagaaaaatatttaaagaaataggtaagcagaagcagttcgacattccagccatggagtgttttgcaccttacctatccgctaccaatatcttacaacaaattgttcaacaactaacaacagacaaccaggattgccctagaaataaggtcctcgaaattttagaaaagaaattaaaagaaaaaaagtatttgttggtgatagatggtgaagttagtggtactgaactgaacaacattttgagtacactcccgattggtcatgcgggtagtagaatagttcatatcacagaaagtaagccagaggagccacctagcaactatcatcatgtcaccattgagttgaaaacaattgacaaaagtatatccaagaagatgttcctacaccatatggaagtacaaaatctagaccttgaaaaccatgaggatgatattatttttcagattactggagggttaccacttgcaattgctcttttatcaggtcttatgaaaaccaaggagtccactggtgagtggcagaaggtattcgaatatcttaagtccaagcaatcaaaacaaattgatgatatgctctcaatttgctttgatgatcttccacatgagctgaaatgttgcttcctgtatcttgctgcatttccagccaatgttaccattgaggcacgcaacctagtgtctatgtgggtagctgagggatttctaaggtcaaaagttggcaagtcaatggaggacattggctacttctacttgaaagagttgtcggctaggaatctagtcagtctggttcaaatggacgatgattccaatgttagcaatatgactgttaccatccaaaacaaagtccatgaatttttgcagtttgaagcacatgaggcaagcttcctagaggtacatagtggtgatgatatccccacattgacaagtgctcgtcgtctctccttgcagaattacactgataaatatgctgttctagcaaatccattgccgaagctacgatccatcttctcccagtttgagcaagagcctaaagaggaattggagaccatgacaaaaagcatccaagcatatgtatgttgttcccctcaacaaggtactatagcttctatgcagaagaagaatatcaaatctcacataaaagaactattgcatggatctgagttcctccgtgttatcaatatacaaggcattgagataggtaacaggttgacacgtgcaataggcaaagccgttcacctccaataccttggaatcacttcttgctcacttgaaaacatcccatcatccataggaaatcttacaagccttcaaacattggatgtaagggaaactaaagtccggaagctcccaaaggcattttggatgatcaagacactaaggcatgtgtttggttttatcctcaaattacccaagcaaactgtcaatttgaagcagctacatacacttgattccatagaacttgaagattttgagcaaggcttggataatacacttggagagatgatccatcttgagggcttagttatttggaaaatctcaaatggtaatgtcaaagctctgttaagtgctctaagaaagcttgagagccttaagactctaaacttacaaggtaacaatattacatcaagtgtattcaccaccttgttcttgcgtcgcctcaagtttatggttctagacggggagttggacttttcatctgatcaactgaataatgggttagccctccctaatctgactatgcttacattgaaggaaacaaaagtaactcaggagtttattaacaagctagcaaagcttccctctcttgtcacacttgcgttgtgtctaggatcctacaaggatcaggaacttgtcttcttttctaataaatttcgatgtctacagaagctcaaggttgacgtggagaaattgaagaaagtagaaataaagttgagtatgcttcccaaactcaaaaaattagaaatccagacacatgacagtcatcactatcaagagcatgaagtaactcatcaggaacacgaacagaagacagtgatctcttggaaaaaggaaaatgctattcaagttgaatga</cdnaseq>

Protein Sequence

<aaseq>MLTFVKGLDNEASAYIVDEARGRHRCVWTSSCSVDMIGTRNGLI CVLDGDTGAVTVANPATRVAVHAAAAVTGVALAVLPRRVHVPCYFNKSGTFDAMYPLW IRPTAKLVTTFTTQAHIRHKLSRKIKAINSRLEDIIENKHKYKIEEANTKTTRTWKAS TSISYTHKKLEYLHESDVPIHVEERKKLEKVLLTTPEDLHGKEHNPVIISVFGKSGVG KTTLVRKIFKEIGKQKQFDIPAMECFAPYLSATNILQQIVQQLTTDNQDCPRNKVLEI LEKKLKEKKYLLVIDGEVSGTELNNILSTLPIGHAGSRIVHITESKPEEPPSNYHHVT IELKTIDKSISKKMFLHHMEVQNLDLENHEDDIIFQITGGLPLAIALLSGLMKTKEST GEWQKVFEYLKSKQSKQIDDMLSICFDDLPHELKCCFLYLAAFPANVTIEARNLVSMW VAEGFLRSKVGKSMEDIGYFYLKELSARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQ FEAHEASFLEVHSGDDIPTLTSARRLSLQNYTDKYAVLANPLPKLRSIFSQFEQEPKE ELETMTKSIQAYVCCSPQQGTIASMQKKNIKSHIKELLHGSEFLRVINIQGIEIGNRL TRAIGKAVHLQYLGITSCSLENIPSSIGNLTSLQTLDVRETKVRKLPKAFWMIKTLRH VFGFILKLPKQTVNLKQLHTLDSIELEDFEQGLDNTLGEMIHLEGLVIWKISNGNVKA LLSALRKLESLKTLNLQGNNITSSVFTTLFLRRLKFMVLDGELDFSSDQLNNGLALPN LTMLTLKETKVTQEFINKLAKLPSLVTLALCLGSYKDQELVFFSNKFRCLQKLKVDVE KLKKVEIKLSMLPKLKKLEIQTHDSHHYQEHEVTHQEHEQKTVISWKKENAIQVE</aaseq>

Gene Sequence

<dnaseqindica>6289..8515#3094..3309#1..293#atgctcaccttcgtcaagggcctcgacaatgaggcgtccgcctacatcgtcgacgaggcacgaggccgtcacaggtgcgtgtggaccagctcctgctccgtcgacatgatcggcacccgcaacggcctcatctgcgtcctggacggcgacacgggcgccgtcacggtggccaacccagcgacgcgcgtcgcagtccatgccgccgccgccgtgacaggcgtggctcttgccgtgctccccagacgcgtgcacgtcccgtgctacttcaacaagtctggcacgttcgatgccatgtaggtgtacgccctcggcggcagcgcaccgctgtcatggcagagtgtgcctaccgtaggtgccagcggccgtttccagccgggaggggtcgcctgcgtcgatggcgtggcgtactggatcaccgccggaatgcagctggttgtggccaggtcgtcactgggtactgagtggagacgggtggccggcgcatcaatggggattccggcgaccggtggcgcgtcgattgggattctagagaccggcgggcggcggcacgtcgatttggagttgggcggtcgacagcgcgtcgttggggagtcgggctgccggtggcgcgattgggagtcggcgccgcctcgctgggaagagaggaagagaatgatttaggggagagattgatttgctagggttttcacttttcagtcaacaaggatgaataaattagccaaagggtattttagtcattaagagaaaattcaatacagcaaacggatgccaactaacggcgcatggacggcgagggcacacaagagaggttaaagaaaatacgatggtatattattgaacttgacaaagtgagtggtagattgtagaagtacgataaacttagtggtactgagtggattctctcttttttcatctccctccactgtcttaatagtacgacattcctaaactcaaatgtaaataggaggagaattataccaataggaatgtcttctttccatctttctttcattgtcttaagggatgccaatgccgaaaccgtttcaccatatattctttagatgattgatgcggttacttgtagcttcaaatggcctcgcacggtccatcatgacaaagccttcactcgcccttgatcaccggatttggttcttcggtgccaagccccttgcttgcccttgaccgccgcatggtccatcgtaaccaagcatcgcttgcccttcaccgtcttgccatagtagccacttcgtatcccatatcttcaatatcttcactttgtcatcattggcatctttaggtgtaatgagatcacttgagcaacaatacctttgcaatccttgggacctatttctctcattcaactcaataaaattattatatgaataaataatgagtactaatcaacaccacaagtgtcatatactcgaatgtatactcaaatgtaaagatcccaattaaataaaagtgaatcacttggatcaagtacatgcataactaaggtatagtatttactccccctaaatgtatgcatacgaaatatttgtgtgaagcaagagtatgtataacaagatatgaaacattgagagcttatcctatacaagaatagaagacatttatcaaatatagacattaaaataaaaacataccttcatcatctccatgttctcaatgtaaagagactaaacaagatatggctcaaacaaaacattagtctcacatgcttatgtaatcacatgaaaatatcaatatgtgaacagagagaaagagtgatacatggcttgatctctattcatttcatctttgtgatttaggtccaccatcaatgaacgtttctatctcaacttatatgatgtctgggaatcacttctcacatattccgttttcatatccatatgagactagtagacaaagaaatgcttataattaacaatattagtctcatgtaattggatttatcattaatcaccaaaaccaaattaatggcacataaactttcacaaactccaattgtactaaatttggactccctccaaatttaaacttctcatcctatacgcatacaatatctccatcgtatgccatatggaatctccaacaaccacatgcattgatctttagcctaagcatcctgcaagatactccgattgtcaggacatcatcttctcccaagttaactcctgatccatctccggtaactctctctctcgaggcgtcaagactcacctacacatgaatctaacacaaaaccatatccgaatacaagttctctccaacttgactcaacattagcatacaacagtattacatatgcatagaaatcatctagaagtcataaacatgaattatccacgagtatccaaataaataacccgaaaccgaaaccgatacagagttggtcagtcaaaccgcgggctgaccagtctgaccgcgcacataacatcggtctgaccggtcccgtcagacaaaaatccctgtttaccacttgaaaacattgttcacaatcatcccagtctgaccggtgccaaaaccacttcctcaataatctccatatatcaaaacaaataatctcagatgtcaattgttcatcaggaaataagaatcaaacacactttgattttacacttgcaaccacaaagtttagccaataagtagatgtgagtctcaaaagtttaatgaaacattcatatcttaattagggtaaactttggcaacaaaatcagccatcctttgttttaccaataagttccatagaatatttttccttaagttttagtacaactatagtttagtttagctttgtatgtatttatatgatacttatacatatgcttttggtctatctagattataaatttttttattttagcaactattacttagtggggatttgcgtcgaaagtagagatcaattgtcagtactggtctaatggtctaaaaaaaggatcaaccacttgattaatagatgatctaataatgaataatgcttctatgcttcaacaaagttgaatatatggtcttgttttgagatatctgctcttgatggtctagttttaaaaaaaaattgctctaatagttttatgtacatgtattcaggtacccattgtggattcgtcccaccgcaaaacttgtcacgacctttacaacacaggcacacattcgacacaagctgtctaggaaaataaaagcaatcaattcaaggcttgaggacatcattgaaaacaaacataaatacaagatcgaggaggcaaacacgaagacaactaggacatggaaagcttctacatcaatatcttacacccataaaaaattgtaagtagacagaagtaccttttgcaatatttatctacatgtattagatctctagtattatttggatttggttctttgattattcttctgtagaaataaaggcttagctattccaacttcaagtttcaaaattgtggaactttatcttttagttacattaaaatcagaaacatggagttcaatagaaaacacttgaattccaagattaagtttgagaataaaaaaaaatcaaattattggacttcaaatataaatattttaaatctcatttagcaaatggtattcctgtgttggtgctttttctgaccaacatgggttcacctaaaaatttacggtgttaacagggtcgccagccacctcggagtagaaaagctcttaacaaagatgggtttagaaaagaataaaactaactagcggaactgattcagagatcaaaccaacgtctaggctgatttagatcgatttgaaaataacaaccagtctcatgggtgaaacggaaggtttacgaggcaaaccttcaaagggtattgcactctcgcagcgaaggcggatgatatatggcgcaaatcgacaaagatggatgaaactataggataaagtaaaaatacatggctgagaagtaaatgtaaaagaacgattcgatggatggtggtcaggggtttagaatcgaaccatccattgcccttatgaagaggttggtcttgtctccgtagggccttctccacatcctattaggcttagagaataatttggactatagaaaccttggaacaaaataaggaaactaataacccacaaattgggctcgaagtcgaatctgctggtatgaccggccacataccgtcggtcaaattgggcccacaccatcggtctaatcaaccctatggcagggctcaaaccagcttcatatggcaaaccgggtcttttctatatatggctgtgttttcttattttcaatgtttggtgtctaatttaggtgttaacacttttatagggagtttttcgtaatgtaggaataaatctaaaccccactatcaagtttatctagaagcactactcaacttatatagtggacataattaacacttcatcttttgaaaccattcatttctacagttacatctcactaatcacctaaagcttaacatataagcatagtaattattaacctaacctaaagcttaacttacaaatataccacatcaacctactaagcacatgtaactcaacatgcaaccatagcaattaattattaatatgtcctaaacttaatatacaagtagaccatatcataatatttcaatcaaaatccacccaccatttctactatattcaacatatattcctccatatgtcccgctgcaaagcatggtgcgtcatcaaaacccaaaccgtggtttttctctatggggtgctgacaatttagttaagaaaaatattttgtcgtatctatatttttagatatacatctaatttctaatctaattattgctctattaaatgattaaaccaacaattcatgatccataatgcctatattttaaactaaaataagacttgtataaaataaaatagaaaagtataaaaaatatcaatagggattgaattaaattaattagagagactctaataaatttgtaaaaaatagttattacttttcaaaaattggaacaaccattgtatgttccattgccataaccatgtttaagtgcttagatattaatggtcttccatctatcctataccctggaattatgagtttctccaattattgcatatataagatatactaaggtagcaagatgtagaagtacgtagttggttaaaaagttatatatatgctactattaacattatatttagaactcatgttgactaggtatattttaaaaaaataaattataaatcacatatataacagtgaaacgaggtgtacaatatatatctcctatgtatttattgaaacactctttctagaaaataaagaagattattgataattgcttatagtaatgaattaaatattatatagttcaaaacttacaaatatcttgtaaaaaaattatctaagcaatgtccacgaagaaaattttcaaagaaatagtacttttcaaacatagcaggtgtcatctcattgatattccaccttacaagttactcaagcgtaacttacattacattctcgtgcgaatgcgtgggctaccttcctagttgtttacatggccaacaggttagcccaattttccaagccaaccaacaatacccttatgtgtttgttttcaagctaacttcttaaaaaaaagattggctgaattcgttattaggccaattccgtcctagtttgcatgacctggtaaaatcacactaggttgttagctagtctagttttcattccttttttaggggtgggagagggggggggttgattggggtagaaattaaacccattttcatacttaggctatgttcgtaacttggggttgggaacccatctcctccacatggaaaaggaagcagtccattagcacatgattaattaagtattagctaattttttttacaaatgaattaatttgattttttaagcaactttcgtattgaaactttttgcaaaaaacaaaccgtttagtagtttgaaaagcgtacgcgcgaaaaacgagggagaggggttgggaacccagagcaccgaacacagccttaggggtaaacaaaacacctactataatacatcaagtggttgtagactttttcctttaaggaacccacgaggctctacacctaatagtttcatgttttcagatctctttgaaatatttgaaaggtacaaagagatactgctacttacaagtcagaaggcaaagaaaaaaattaactcttttagtgaactacatttgtggcacaactaggatatagttatcacttattaaaattatacgtactattactgataataacggtatacttatgatttgaccacagggaatatttgcatgagtcagacgtgccgattcatgtggaagagcgaaaaaaactagagaaagtccttcttactacacctgaagatctacatggcaaagaacacaatccagtcataatctctgtgtttggaaaaagtggtgttggcaagacaactcttgtgagaaaaatatttaaagaaataggtaagcagaagcagttcgacattccagccatggagtgttttgcaccttacctatccgctaccaatatcttacaacaaattgttcaacaactaacaacagacaaccaggattgccctagaaataaggtcctcgaaattttagaaaagaaattaaaagaaaaaaagtatttgttggtgatagatggtgaagttagtggtactgaactgaacaacattttgagtacactcccgattggtcatgcgggtagtagaatagttcatatcacagaaagtaagccagaggagccacctagcaactatcatcatgtcaccattgagttgaaaacaattgacaaaagtatatccaagaagatgttcctacaccatatggaagtacaaaatctagaccttgaaaaccatgaggatgatattatttttcagattactggagggttaccacttgcaattgctcttttatcaggtcttatgaaaaccaaggagtccactggtgagtggcagaaggtattcgaatatcttaagtccaagcaatcaaaacaaattgatgatatgctctcaatttgctttgatgatcttccacatgagctgaaatgttgcttcctgtatcttgctgcatttccagccaatgttaccattgaggcacgcaacctagtgtctatgtgggtagctgagggatttctaaggtcaaaagttggcaagtcaatggaggacattggctacttctacttgaaagagttgtcggctaggaatctagtcagtctggttcaaatggacgatgattccaatgttagcaatatgactgttaccatccaaaacaaagtccatgaatttttgcagtttgaagcacatgaggcaagcttcctagaggtacatagtggtgatgatatccccacattgacaagtgctcgtcgtctctccttgcagaattacactgataaatatgctgttctagcaaatccattgccgaagctacgatccatcttctcccagtttgagcaagagcctaaagaggaattggagaccatgacaaaaagcatccaagcatatgtatgttgttcccctcaacaaggtactatagcttctatgcagaagaagaatatcaaatctcacataaaagaactattgcatggatctgagttcctccgtgttatcaatatacaaggcattgagataggtaacaggttgacacgtgcaataggcaaagccgttcacctccaataccttggaatcacttcttgctcacttgaaaacatcccatcatccataggaaatcttacaagccttcaaacattggatgtaagggaaactaaagtccggaagctcccaaaggcattttggatgatcaagacactaaggcatgtgtttggttttatcctcaaattacccaagcaaactgtcaatttgaagcagctacatacacttgattccatagaacttgaagattttgagcaaggcttggataatacacttggagagatgatccatcttgagggcttagttatttggaaaatctcaaatggtaatgtcaaagctctgttaagtgctctaagaaagcttgagagccttaagactctaaacttacaaggtaacaatattacatcaagtgtattcaccaccttgttcttgcgtcgcctcaagtttatggttctagacggggagttggacttttcatctgatcaactgaataatgggttagccctccctaatctgactatgcttacattgaaggaaacaaaagtaactcaggagtttattaacaagctagcaaagcttccctctcttgtcacacttgcgttgtgtctaggatcctacaaggatcaggaacttgtcttcttttctaataaatttcgatgtctacagaagctcaaggttgacgtggagaaattgaagaaagtagaaataaagttgagtatgcttcccaaactcaaaaaattagaaatccagacacatgacagtcatcactatcaagagcatgaagtaactcatcaggaacacgaacagaagacagtgatctcttggaaaaaggaaaatgctattcaagttgaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0501500, RefSeq:Os07g0501500