BGIOSGA011941

From RiceWiki
Revision as of 15:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011941

Description

Expressed proteinOs03g0168200 proteinPutative

Definition

Oryza sativa Indica Group BGIOSGA011941, complete gene.

LocusTag

OSJNBA0091P11.31

Ensembl Transcript ID

BGIOSGA011941-TA

Ensembl Protein ID

BGIOSGA011941-PA

Length

1794

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4133854..4135647

Sequence Coding Region

4133854..4134211,4134868..4134967,4135060..4135180,4135324..4135419,4135525..4135647

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4133854..4135647 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4133854..4135647 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCTTGCTTGCCATCCCTCTCACCGGCGCCGCATCAGGCGCCGGTGCCGGCGGCGACGACCGCGCTGGCGGGGAANCTGACCTCGTCCCTCCTCTCCCTGCCCCCGCCGCTGCCCCGCCTCGCCGTCTCGCACCGCAGGGCGGTGGTCGCCGCGGCCTCGTCCCGGCCCCCGCCCCCGCCATCGCGGGAGGGGGGTGATGGTGGTGGTGAGGAGGAGGAGGAGGTGGAGAGGGCGATGGGGATGGACGGCGGCATCCCTGGCACCTCCGGCGAGTTCCTGCGCCGCGTCTCCTCCCGCGCGTACGGCATGCGGCGCCACCTCATGGAATCGCTCGACTCCCTCGCCTACGATGTGTTGGAGACAAACCCATGGAGAGAAGACTCCAAACCAGTCTATGTACTGGCTAGAAGAGATAACCATCTATGGACAATGAAAACCCGTAGGAGTCGCAGTGAAGTTGAAAGGGAACTTGGAATGCTCTTAAAGGGAGGGGGTTCAGGAGTTGGGACTAAATCAAAATACTCTGGTTCCAAGTTTAACATGCTTGTTGAAGATATCAGAGAGGGAATACTGGTATTTGAAGACGAGGACGATGCTGCAAAATACTGTGACATTCTACAAGGTGGCGGCCAAGGTTGTGAGGGGATTGCAGAGATAGAGGCATCATCGGTTTTCAACATCTGCCATAAAATGAAAGCTCTTGCCGTCCTTTTCCGTCGTGGTAGGACCCCTCCATTGCCTCAAAGCCTTGAGCGCGACTTAAGGGCAAGAAAGAGATCATTGGAAGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAACLPSLSPAPHQAPVPAATTALAGXLTSSLLSLPPPLPRLAVSHRRAVVAAASSRPPPPPSREGGDGGGEEEEEVERAMGMDGGIPGTSGEFLRRVSSRAYGMRRHLMESLDSLAYDVLETNPWREDSKPVYVLARRDNHLWTMKTRRSRSEVERELGMLLKGGGSGVGTKSKYSGSKFNMLVEDIREGILVFEDEDDAAKYCDILQGGGQGCEGIAEIEASSVFNICHKMKALAVLFRRGRTPPLPQSLERDLRARKRSLED</aaseq>

Gene Sequence

<dnaseqindica>1..358#1015..1114#1207..1327#1471..1566#1672..1794#ATGGCAGCTTGCTTGCCATCCCTCTCACCGGCGCCGCATCAGGCGCCGGTGCCGGCGGCGACGACCGCGCTGGCGGGGAANCTGACCTCGTCCCTCCTCTCCCTGCCCCCGCCGCTGCCCCGCCTCGCCGTCTCGCACCGCAGGGCGGTGGTCGCCGCGGCCTCGTCCCGGCCCCCGCCCCCGCCATCGCGGGAGGGGGGTGATGGTGGTGGTGAGGAGGAGGAGGAGGTGGAGAGGGCGATGGGGATGGACGGCGGCATCCCTGGCACCTCCGGCGAGTTCCTGCGCCGCGTCTCCTCCCGCGCGTACGGCATGCGGCGCCACCTCATGGAATCGCTCGACTCCCTCGCCTACGATGGTAAGAGTTGTCGGATCCTCACCCTCTTTTCGTGGATCGTATACGTTCTTGATCGATTATTAAGGAGTAAAAGAAAAAAAAATCTTCGATCGATTTAGGGGTTTTAGTTTTTACTAGGGGGTTTACCGAGATCGCTCGATAAACTGCGTTCTCCATACTCTTGAAGTGTCCGAAGATTTCATCTTTATCTGTTTGATTTGGCATCAGCACCAGCGACGTGAGGCTTGTACGTGCACGCGTACATACCGTATTTCGTGATATACGTGTGATTCGAGGTTTGCCTAGTTAAGACTTAAGAGCATGCGTGTACGTGACAATTAACAGTAACAATCTCTAGCTATTTCCACAGTTTTTGGCTCTGCTCAATGTATCGAGATTTGGATGTTGACATGTCATTGTAACAAAGTGCTGAATTGACATGTATGCTGTAGTAAAACATACCATCCTGCATTCAGTAGTATCAGAAACACTGATCCCCACTCCCTAGTTAAGCTTTATATTTTAACACTTTGATTTTTCAATCAAAGATCGGTTAGAAATGGTGTTCAAAAGATTTATGCTTTTAGAAATGCTGTTTTCTTTGTATGCTTTGCTAAACTGTTTTACAAGCATGGCAGTCTGAAATTTTACTAACTGGTGTTTTTCTTCTGGTTCAGTGTTGGAGACAAACCCATGGAGAGAAGACTCCAAACCAGTCTATGTACTGGCTAGAAGAGATAACCATCTATGGACAATGAAAACCCGTAGGAGTCGCAGGTTAGAGTAATTTTGCTGCTGTTGCGCTTACACGTGTAATTTTGCTGTTACTGAACATTCTGAACAAGTCATGTTATCTCTATTTTCTTCAGTGAAGTTGAAAGGGAACTTGGAATGCTCTTAAAGGGAGGGGGTTCAGGAGTTGGGACTAAATCAAAATACTCTGGTTCCAAGTTTAACATGCTTGTTGAAGATATCAGAGAGGGAATACTGGTGAGTAGTTAAAGAGAGGGGTTAAATTTTGTGGATGATTTCTTTGAGAACCGACTAGGTGTCCTGCTTTTCCTCTGGGTTTTCAGTTGTTTACATAGCTACTTGCTTGACATTCTCTTGAATCATATCATCCTTTGTCTCAGGTATTTGAAGACGAGGACGATGCTGCAAAATACTGTGACATTCTACAAGGTGGCGGCCAAGGTTGTGAGGGGATTGCAGAGATAGAGGCATCATCGGTAAGAAATTTGGTGGACATGGGTCTTCATAGTACCAATTTGTGGTTGGCAATTGATCATAGTAGTAGTACTTATGTACCGGGTTACACTCGTTCTTGTCTGCAGGTTTTCAACATCTGCCATAAAATGAAAGCTCTTGCCGTCCTTTTCCGTCGTGGTAGGACCCCTCCATTGCCTCAAAGCCTTGAGCGCGACTTAAGGGCAAGAAAGAGATCATTGGAAGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011941