Os07g0507700

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Revision as of 08:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0507700| Description = Bromodomain containing protein| Version = NM_001066276.1 GI:115472284 GeneID:4343336| Length = 8007 bp| Definition ...")
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Gene Name

Os07g0507700

Description

Bromodomain containing protein

Version

NM_001066276.1 GI:115472284 GeneID:4343336

Length

8007 bp

Definition

Oryza sativa Japonica Group Os07g0507700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19941908..19949914

Sequence Coding Region

19945480..19946127,19946205..19946253,19946337..19946401,19946511..19946565,19946639..19946698
,19947844..19947962,19948083..19948149,19949053..19949174,19949258..19949527

Expression

GEO Profiles:Os07g0507700

Genome Context

<gbrowseImage1> name=NC_008400:19941908..19949914 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19941908..19949914 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccacacaagcttgtaagaagagaagagcagtttatataagcagtgaatcagaagactctggtacagactctgaggttgagggaagcaaactctccaaaaaagatggggtcacgtcagtctatacatgtggtcaccagccaacctctaagaataaggttgatccgatgaatactagcaagtcaaggcagtgtggaagtattctgaagaagctcatggatcacaaaagtggatggatttttaatacaccagttgatccagtggtatatggaattcctgattactttgatgttattcgcaatccgatggacttgggtactgttaaaaggaaactcacaagcaagcaatattccaacccttatgagtttgcagcagatgtgaggctaacattctcgaatgcgatgaagtataatcctccaggaaatgatgtccacggaatagctgatcaattgaacaaaatatttgattcggaatggaaattattggaaaggaaatggaaagacagaaatttggtacaagagcagccatcactgaaggtattaaaggctcagcctgctgttaccccaaaacctgtgctacctaagggggtgactgcaggcacaaattcagctgtgagcaagacactggcaactgcattatcctccaaagtaaaaattaaattttctgtgcgaggctctgagctgacctcttccaaagacacgcctttgcaagcagttggcagaagagacggcacaattaaccaatctctcccttgcaccaaggacaatgctaagacaccaaggatacaatcaagtgaggacagatctgaatcaactggaaatgaattgcggccttgcgatgatgcttctacttcacctcttgcttcttccagacaagaagaggaatatttgcctgaagaacctttatcaccaagcaaggctcttcgtgcagcaatgctcaagagtcgttttgctggtacaattgtcaaggcgcagcagaaagcacttctggatcatgggaagaaaatagaccctgcgaaattgcagttagaaaaggagaggctggaaaaaaggcagcaagaagagaaagcaagaattgaggcccaggtgaaggcggctgaagctgctgcacaattaaagctagacgaagaaatgaggatgaagagggagcaggaaagacgagcagcacgcctggcactacacatgatgaagaagactgttgatattgacaacagtgacttccttaaggacctggaaaacttaagcaaaaagtgggagctgaatccccctggcaaacttattgttgattttgtcgacgggatcgatctaccacctggcttagggagtccgctagagaggcttggccttttcatgaagaaggatcttgaggaagaggtcgaacatgaaatggaggacagtgtatcaccatctacggagatcgacgtggaggaaggagagatcagcttctgtcaatag</cdnaseq>

Protein Sequence

<aaseq>MTTQACKKRRAVYISSESEDSGTDSEVEGSKLSKKDGVTSVYTC GHQPTSKNKVDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNP MDLGTVKRKLTSKQYSNPYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWK LLERKWKDRNLVQEQPSLKVLKAQPAVTPKPVLPKGVTAGTNSAVSKTLATALSSKVK IKFSVRGSELTSSKDTPLQAVGRRDGTINQSLPCTKDNAKTPRIQSSEDRSESTGNEL RPCDDASTSPLASSRQEEEYLPEEPLSPSKALRAAMLKSRFAGTIVKAQQKALLDHGK KIDPAKLQLEKERLEKRQQEEKARIEAQVKAAEAAAQLKLDEEMRMKREQERRAARLA LHMMKKTVDIDNSDFLKDLENLSKKWELNPPGKLIVDFVDGIDLPPGLGSPLERLGLF MKKDLEEEVEHEMEDSVSPSTEIDVEEGEISFCQ</aaseq>

Gene Sequence

<dnaseqindica>3573..4220#4298..4346#4430..4494#4604..4658#4732..4791#5937..6055#6176..6242#7146..7267#7351..7620#gccaccacaaccacgcactcctcttttttttttccccttccccaccaccaccaccgcctctctcgccggcgaagagaagggggaagcgcggctgcggcggcggcggcggcgcgcggcggaggtagggcttgaggtcctgaggtctctcctccgtctcgatctgcctcctaaccccgaagcgagagggattttgcgcggggagggtgggggtccgtacagcccggccgccgtatcccggggtggcgctgaggctgccatcaggttggttcgctactcgtttccttgtcctcgttccgctaggcaatttcggtgtggtggtggtttcgtggagtggggttgggggggggggggtctgattcaatttctagggtttcgagcgaacaggtcgccttatcatgaaacggtttcgtcgattggggttgggattattgcgattggtactgcgtaggtgagtttatggggattgcttatcgagcttcgtcttccacgggtagagatccggtggagatttccggcgggcctgtagctcagaggattagagcacgtggctacgagaccacggtgtcgggggttcgaatccctcctcgcccacagacttccaaaggggaatcgggacttgtagggttagggggggataaattggggcttctagggtttggtcgcgaactcacgatatttgctagtgttatgctgatgtgtgtctctctgctctgctctctagctgctaggttaatcgagattaattctgtatgtatggatgctcaccctagctaacggttgttggtgcatcaaaaatagaaaccaaaagtggaaactgatctttttgttgtgagttatagccattaattgcttctgttactgtccacatttaagtgcctccatgttttttgtaaagcctccatattattacacatgtatcaccataaaaatggaaatgaaggtatcttggtagttacctacctaccatagaataaatcaagtttacaccgtaagcatatactccctccatcccattatatagggcgtacctgctctagacgcacagaccaaggattttcaactgttccgttcgccccgatacgtgaagttttgcttcatccgtggaccttgatcttcacagtgtgtatcccagcaggccacgcccacgtattgctgggagagagaggccttttaactaagagcaggtacaatagcaggctataagccagctataaacatattttaaggagataaaagaggagagagaagagcagcgagctacagatttgtagccagctgtagcacggactccaagacgcagtgtgtatgacaagtaggaccatatattaatagtgtagtatgtaactattgtacgaattggctattaaattgactatagatgatttggagctagtagttggctatactattaaacttgctctaagagcacccgcaatggtaaagtaaggtgctatctataaaacatgtacatctcagcaatagactagaataatagtaaaccatctcaatagtatgtctacatgggtatctatagctctctaatacattgcctcgtttttctctatagactatctccaggttagtagatagctttgctctctctcttcatttaatctcttctaagtaggaaaatatgctgacatggatctcttatagagagcctatagataaccattgtgggtgccctaagcaaactaatcagcaataatgcatgcttgtaaacggaagccgaggaggtgatgtcttgaatgcttgcatgcatatgaatggaaacgagcaaaacttaaatgcttgcatgcgaataaacggctgtcgaggagatgccgtcttatattgtgggatttgagtaaaatacaggtacaccctatatattggggtggagggagtggtgctgagcaagaaaaaaagagattgctttctctcatagctttacttgattgttcctgttcctgttcctgttcctattttttctttttctgaaaaaaatgaattttagaattagcatgcaatattttcattgcacgagaaaaataataggtgcttagttctttgtcatcggttcatgcatgccacatgacacctcttatcttgctgtatctatatctgcccatgatgtgctagtttgtggtactagaactaagttcaagcatacatcttttagggtatgtttggatcctaggcaagagaaatcttatcctagcttagcaaggacagcagtttgctaacgacaataaaaatcttacttctgtgggaaagcttgcctataactgcccaggaaagcttgcccagcttgaaggacataaggcacttctgtgtgacagttgatgcatgctaggctacaaagccaaatgttgtgcttagtttctttgagctatggcattgctgggccaatttgtgctggatatgtgatgcgaactgataataagatataaacctacccttagtttcgagctgtgttgtttcaattaaaagcactggttgatctgccagccggcaatccttggttgtctgcctgcgcctgtaggtgaaccatcagcaaacctttttgtgagttgaagatagtatttttcggtagcctttgctagacttaacaaagctaaaaacaggattcctcaactgatcaagaattacatttatgcccaatattgagttcacaccatgagtttcattcacaaaggatcccttgctgcccgcctgccatgcactcctctaaccacatgtcaatatattattattccttattacaataccctaattactcgaataaagtaaaaaaaaaaagaacaaaggagcgaagtatagtgtagttactccttccccaccgaacatatctcgttccaatcttctatatctacttccctcctgctcacgtacaacaattccaccaccaaatctgtcaaccatgatggcgtacctcgccaccggcgaccactagaggcctctgtacttgggtttttgattttaggcagttccatgacgtgtcttaaaaaagagttgagttgatctggtgttgtcccccaccaagaccagaaccgccagcacgctgttggtttgcccagtttcgctgcatcccttgcctctgcgctgatgatgcaggcagatcaactgcttcctataacgtcttggcccatgcattgttatcatcgaatggccttggcacagccaacattgacacttacccagcgctgtgggcctgcgagatatggtgagaggtatcggtgtccgatgtctgttaggcaggagcggatgtgtggtgaatattgacacgtgaaaaaaaattaataagcaagtcatatctggttgcatgtatgagaagtttaatgtttttgccagattctatgcaattttgtttgaataatactctcgaataattatgtacaattgaacacctcctgttaattaattgtacataagcaattctcattatttctatgttctgttcctgtttgtgtttactattttattctggcatgttaaacagcttgcctctatctgaatcttctggccctgaaaagaagctaaaattatttttctttgtcaagaccaaaaagtatttattcaaaccaaacactatgaccacacaagcttgtaagaagagaagagcagtttatataagcagtgaatcagaagactctggtacagactctgaggttgagggaagcaaactctccaaaaaagatggggtcacgtcagtctatacatgtggtcaccagccaacctctaagaataaggttgatccgatgaatactagcaagtcaaggcagtgtggaagtattctgaagaagctcatggatcacaaaagtggatggatttttaatacaccagttgatccagtggtatatggaattcctgattactttgatgttattcgcaatccgatggacttgggtactgttaaaaggaaactcacaagcaagcaatattccaacccttatgagtttgcagcagatgtgaggctaacattctcgaatgcgatgaagtataatcctccaggaaatgatgtccacggaatagctgatcaattgaacaaaatatttgattcggaatggaaattattggaaaggaaatggaaagacagaaatttggtacaagagcagccatcactgaaggtattaaaggctcagcctgctgttaccccaaaacctgtgctacctaagggggtgactgcaggcacaaattcagctgtgagcaagacactggcaactgcattatcctccaaagtatgatcacagtcatgtaccctcattcagtgatttttcttcttgggactttgatcaaagtactgctctctttgcaggtaaaaattaaattttctgtgcgaggctctgagctgacctcttccaaaggtgtgaatagaataaactctatgcatacaatctttccattgttgattgtatttgacagccattaccaatgcttttcaattcagacacgcctttgcaagcagttggcagaagagacggcacaattaaccaatctctcccttgcaccaaggttttgggcacgagctcctttgtttatacttgagtattcttatctgagtcttggtatcattagctaaacaattgtgtgatccccctcttgtcttgtcttttatttttaggacaatgctaagacaccaaggatacaatcaagtgaggacagatctgaatcaactggtatgtttatgatttccacgtaattttatcccatactgttttattttactaaagcactcaattattatcttaggaaatgaattgcggccttgcgatgatgcttctacttcacctcttgcttcttccagacaaggttggacatgctatctatttatccatctatttgtgcatgttaatttgcatactagtatctctgttctcaaaaggatgatgtcctagattcattgcaaacacagtcaaacctcaaaaatcttaaatcattaataaatgaaaaaataccaggatttaaaaatcatattagtagatttgtgaggaaaaactgtcatatggttatattttaaatattgttcccatactatcataaaaatacaaactgattccatttgtcatccttgagttttcggccatggcgcaattctgtcgatttcctgcacgtgatttttcggtcgtctcatcattgtttgtttttcatctgagtcctgtgcacactgtggtccgttgtctgcatccgagacccactcacatccgttgtccaacgtcccacgcatgaccctgcctcaccttggccacatgcacccctcttccgtgtgcccatggtgctcccctcctgatccatcctttcctttcgtccatctccctcttcctatgctgcgagaagcagagctgccacaagcagaggcaaagcacagagcgtgattcacttagctaagctgaacatgatcccttaatttttctccatcagataagcatcgagaagaagtggaacaaatttctggattgattcattgtttatgtgagtagttctcaagtctggtttagttacattacgtaaatgtttctgatccacacccttcttttcgtaggacgatgaaaaagaatggataaagatcccaagaatacatagtttgatctgaatactcataccttgagaatagcacatctacaagtaggatttcctctgtgatcgtaccaaaacatgagttccatttggattttcttttttatcattggatttcttcaatgctatagtgtcattcttctggcgcttaatgctatctattcccaattacaattgtgtacagccctacacccgttgcaatgcacggtcattttgctagtaaatatataacttgagaaagtaatgataaaacatgtgcattggagactgccgatgtcctaaatgacaaccatttgagaacagagggtagtaactttatcatctattctttccatatgttcctttgctaatatattgcatcttatgatgtgaattttcagaagaggaatatttgcctgaagaacctttatcaccaagcaaggctcttcgtgcagcaatgctcaagagtcgttttgctggtacaattgtcaaggcgcagcagaaagcacttctggatcatgtattatttctgaaatgtgtactgaaatttgtagatttcaattaggctattccttcgcataggacaagttctagtctacgtctgtgtagctcttgctgatgtgcttttttaatctcctaggggaagaaaatagaccctgcgaaattgcagttagaaaaggagaggctggaaaaaaggcagcaagaaggtaagaatttgcttagcctttgatagcagatggcatggagctgtttgattggcaatacattttttctttaagttcatcaagcattttgatattttatattcgcatagagttctcatctggacttaatatgggatggctgctctttgtgaaagaacttttagaacacattacggtgaaacttgattgacatctcaggcttcgagaaactttgggatcaaaacagtccgtcgagagactttggggaacataaccccggtacatgctagagaattgtttgaacagtacagtgtcccacatagacaagtttgttagtaggtagaaattttatagcaaggcatcatcaagagtcgttttttaacaagtcgatcaggcttccgaccatttttttgttccttgaagcaaataaacttaagatttggatatatagaataagaaaaaagagtaatctttttaccagttgtccccacatagaccacaggttggctaattcaatacactgcttcatagtaactttttgagtcaattcatatactttcacgctgtgaatactcctggtcacatcggatctatatctattttggccaaacgtaatcttgtttcaatatatcaaaactgtagtaattttgttatgaaaagcatgtccatgatattccacattatcacattgttggaaagtctaaaaacaactttattttgttggaaagtctaaatttactttgaagtgtaaaaggtggcatgttttctctgatgggggaatgggtttcctttaaaatgggaacgaatgctcataactatagtggtaactatatattgtatgtattattcttaggttatacttttattttgtattggcacgcatgatttcagttgcatggctttcttttcaatttacccataatgcagagaaagcaagaattgaggcccaggtgaaggcggctgaagctgctgcacaattaaagctagacgaagaaatgaggatgaagagggagcaggaaagacgagcagcacgcctggcactacacatggtattacatgctgccattttctgaccaactagtttgtatgcttaatgttgcacggtgattactcaatctcttctcctacgcagatgaagaagactgttgatattgacaacagtgacttccttaaggacctggaaaacttaagcaaaaagtgggagctgaatccccctggcaaacttattgttgattttgtcgacgggatcgatctaccacctggcttagggagtccgctagagaggcttggccttttcatgaagaaggatcttgaggaagaggtcgaacatgaaatggaggacagtgtatcaccatctacggagatcgacgtggaggaaggagagatcagcttctgtcaatagcacggctctaaaatatccattgtttcttcctttttttctttccccccatcagactctgaagcaacatgctcgcatggcttataaaattgtgcgcgagtgctgtgttatttattctgcctcaagacaacatcataacataagccgagtaaaatgaagcgttggttcatctagtttgtgttgtctaaccagaaaacaaaaatgtcagctgaacactgaagtggagttatcggttgcgtggacttcgccccgattttgtcggttctgtgaaaccctgtatgttgtaggtgttccacgtatgcaattctgtaaaaaaaggaaaataaaaaaaaagttgtatgtaatgtgatgttagactgttagtatataataatattatagttactgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0507700, RefSeq:Os07g0507700