Os07g0510200

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Revision as of 08:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0510200| Description = Glycoside hydrolase, family 17 protein| Version = NM_001066287.1 GI:115472306 GeneID:4343350| Length = 5751 bp| Def...")
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Gene Name

Os07g0510200

Description

Glycoside hydrolase, family 17 protein

Version

NM_001066287.1 GI:115472306 GeneID:4343350

Length

5751 bp

Definition

Oryza sativa Japonica Group Os07g0510200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20097156..20102906

Sequence Coding Region

20097212..20097296,20097544..20098866,20102117..20102144,20102595..20102781

Expression

GEO Profiles:Os07g0510200

Genome Context

<gbrowseImage1> name=NC_008400:20097156..20102906 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:20097156..20102906 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagtaggagcagaggagggagacacctcctcctcctcctcctgcttcacctcctctccctccattcctctctgctaccatgggcggcggtgtcggcggcgggagggggtggttccggagacccgtacgtcggcgtgacgatcgggacggcggtgacgaacctgctgtcgccgtcggacctccccgagttcctccgcgcgcagcgcatcacccacgtgcgcctctacgacgccgacccgcgcatgctgtcggcgctagcgtcgtcgggcgcccgcgccatcgtcggcgtccccaacgacgagctcctcgcgctgggctcctccccggccaccgcctccgcctgggtcgcccgccgcgtgctcccctacgccggcgccaactccagcaccccggggctcatcgccgccatcgccgtcggcgacgaggtccccaccgcgctcccctccgcgctccccgtgctcctcccggccatccagtccctcgctgccgcgctcgccgccgccaacctctcctccatcccggtctccacaccgctccccttctccgtcgtcctcgacccgttcccaccctcccaggccttcttcaaccagtcgctggccaagtcgttcattctcccgctcctctcccacctcgccaacacctcggcgccgctcatgctcaacctctacccgtactactccatgatgcagagcaacggcgtgatcccgctcgacaacgcgctgttcaagccgctcccgccgtcgctggagatggtcgaccccaacacgctgctccactacaccaacgtgttcgacgcgatgctcgacgcggtgcacgtcgccgtgaagaacctcaacgcgaccggcggcggcgggccggtgccggtgctggtcacggagaccgggtggccgtcgtacggggaccgcagggcggagccgtacgccacgcgggacaacgccgacgcctacaactccaacctcatcaagcacgtcaacgacaagcccggcacgccgatgcgccccggcgcgcaggccagcgtctacatctacgagctcttcaacgaggacctccgcccgggcccggtctcggaggcgaactggggactcttccacggcaacggcacgccggtgtacctgctccacgtgtccggcgccggcggcttcctggccaacgacacgacggaccggacgttctgcatcgcgtccgacgacgccgacgagaaggcggtgcaggcggccatggactgggcgtgcggccccgggcgcaccgactgcacggcgatccagccagggcaaggctgctacgagcccaacgatgtgcggagccacgcctccttcgcattcgacagctactaccagtcgcagggcaaggccgctggctcctgctacttccagggcgtcggcatggtcaccaccactgatcccagtcacgatagctgcatctttccaggaagcaagctgttgagcaacgtcaccaaatctgacggggcaaacacaaccactgcgcagacgagtgatgcagagggctctgcaatatggaggctaagaactggaagggagacagggttcttgttcatcctccggtggttgttgagcttgtcagtggtgcttatcacgacgaattcaaacttttggacatga</cdnaseq>

Protein Sequence

<aaseq>MGSRSRGGRHLLLLLLLHLLSLHSSLLPWAAVSAAGGGGSGDPY VGVTIGTAVTNLLSPSDLPEFLRAQRITHVRLYDADPRMLSALASSGARAIVGVPNDE LLALGSSPATASAWVARRVLPYAGANSSTPGLIAAIAVGDEVPTALPSALPVLLPAIQ SLAAALAAANLSSIPVSTPLPFSVVLDPFPPSQAFFNQSLAKSFILPLLSHLANTSAP LMLNLYPYYSMMQSNGVIPLDNALFKPLPPSLEMVDPNTLLHYTNVFDAMLDAVHVAV KNLNATGGGGPVPVLVTETGWPSYGDRRAEPYATRDNADAYNSNLIKHVNDKPGTPMR PGAQASVYIYELFNEDLRPGPVSEANWGLFHGNGTPVYLLHVSGAGGFLANDTTDRTF CIASDDADEKAVQAAMDWACGPGRTDCTAIQPGQGCYEPNDVRSHASFAFDSYYQSQG KAAGSCYFQGVGMVTTTDPSHDSCIFPGSKLLSNVTKSDGANTTTAQTSDAEGSAIWR LRTGRETGFLFILRWLLSLSVVLITTNSNFWT</aaseq>

Gene Sequence

<dnaseqindica>57..141#389..1711#4962..4989#5440..5626#agctgccccagaaaatttaccaggagattgcaggagactagagagcgccactcccaatggggagtaggagcagaggagggagacacctcctcctcctcctcctgcttcacctcctctccctccattcctctctgctaccatgtaagctactgtactactcttgtgttcactgcacatgcttcgtttgttgatgcgccaccatgttcttggtagcgaccgattccatggcttctggttgatttttgggttgtttaatttgttgtgccattttaggttgctccgagtggttgagaacttgagatgtttttgggaatttttttttgctctgtttttgggtgtgctctgttttgtggatgctgatggggtgtttgttgttttgcggatgcaggggcggcggtgtcggcggcgggagggggtggttccggagacccgtacgtcggcgtgacgatcgggacggcggtgacgaacctgctgtcgccgtcggacctccccgagttcctccgcgcgcagcgcatcacccacgtgcgcctctacgacgccgacccgcgcatgctgtcggcgctagcgtcgtcgggcgcccgcgccatcgtcggcgtccccaacgacgagctcctcgcgctgggctcctccccggccaccgcctccgcctgggtcgcccgccgcgtgctcccctacgccggcgccaactccagcaccccggggctcatcgccgccatcgccgtcggcgacgaggtccccaccgcgctcccctccgcgctccccgtgctcctcccggccatccagtccctcgctgccgcgctcgccgccgccaacctctcctccatcccggtctccacaccgctccccttctccgtcgtcctcgacccgttcccaccctcccaggccttcttcaaccagtcgctggccaagtcgttcattctcccgctcctctcccacctcgccaacacctcggcgccgctcatgctcaacctctacccgtactactccatgatgcagagcaacggcgtgatcccgctcgacaacgcgctgttcaagccgctcccgccgtcgctggagatggtcgaccccaacacgctgctccactacaccaacgtgttcgacgcgatgctcgacgcggtgcacgtcgccgtgaagaacctcaacgcgaccggcggcggcgggccggtgccggtgctggtcacggagaccgggtggccgtcgtacggggaccgcagggcggagccgtacgccacgcgggacaacgccgacgcctacaactccaacctcatcaagcacgtcaacgacaagcccggcacgccgatgcgccccggcgcgcaggccagcgtctacatctacgagctcttcaacgaggacctccgcccgggcccggtctcggaggcgaactggggactcttccacggcaacggcacgccggtgtacctgctccacgtgtccggcgccggcggcttcctggccaacgacacgacggaccggacgttctgcatcgcgtccgacgacgccgacgagaaggcggtgcaggcggccatggactgggcgtgcggccccgggcgcaccgactgcacggcgatccagccagggcaaggctgctacgagcccaacgatgtgcggagccacgcctccttcgcattcgacagctactaccagtcgcagggcaaggccgctggctcctgctacttccagggcgtcggcatggtcaccaccactgatcccagtgagtatacccctcctcaacactgccatttcttcctcattgcttatgcatttaggttctttcttcttttcatgttttcagttttaacagtttttgatctgttcattcatgtttgcttggaattggaaggatttagtagaagtgcttgcggttgggtgataattctgtgacattgagtgaggattgtggttaagaaatgcacttgttaatcagctgacgagtgacagttcgagtagctttaggattgactgggtctgggatttgctcatttgcacagtagtttctcgtgatccactttaggtctataaagaattgcaactggccaggccacactggaaacgtttctctgaagatctggggtttcgatttcaagtaggagagacgccattgtcacgcccgaaaagtagacggcattcattcatggaagtccattcaggaaagttgtgcggtttgtcttttaattggacaacacaagcgcacaggtatttattcggttgattgttaggagaaaggttgcttttccttctaggtaagggtaggagaagtgcagcaagcaaccatgtgtggttttatgatttatctaggaggaaaagaaatgctagattcatctaagattggttcagaaaaaaaaatagttcactcgtttggaatcatgttctactttgccagtgtgagaggattctagcaaactcatgatgtccattcttgttttgaaaactgaaatattgcagtgtgcataccgagttgcttgtggccgacaaatggatccccagaactcagcagtggggcctacatgttagtgacccagtgatgatattctttgtgcccatagcagatctctttttaatacgacaatgagtccatgaccacatagaataggatgagaaaggtagcatagagcggacacaagctgagctggatctggttgtagatttgtttggtactctgtaagtcggatgggagtgctcagagtgtggagtagagtgtgatggtttgattggtaacacaagcccacaatgccatttcataaaagagaaaaggcaccacaagattgcaaaaaagaattctcttttcgcatgtgagtaggagcaaacatatgtccaagtcacatgcgaagggcacaatacaccacctcacctgctctctccatccctttcaccaacttatccttgtatgtactttcttatgccattttgaatgagtggtggatccagaataacatcacaatatatctgatccttaaattatcaagcaattttgtaatttacatggcctaaaacaataaagaagtcatccgaccgggctgatacatggaaagaattctggattgtattagtacgacagttttcggtcatctttctgaactgtgccattttgtgtaatgtttcagaaccaaattaccatttatgacaaagctaaatcatggccaatggagatgtataagtaaaagatcttatactcatttagttttcatagtggtctgtcgcatgcttcaaaagctaaagttgagatctgtaatctttttgttgcccgtgattgcctatagttgctctggcattgtttgctcaattgcactgcattttcatgtgcaaccttgtttgcattttgattgtggggtttgggcactgttgggtagcgtgcaggaatcttgggatgttgccttttttgtggtattagtgaatctcatcgaggtcttgttgtcatgaaatttatcatcattatgatgtgcaagtaccaaaagtaggctttatggagttatcactgtgtacctgtgttttgtgtggaagtcctgccccatctccaatatctcaactgtgttttcgataaattgttaatctcaatgtaccataccaatcatggttcgacagtattaacgggggaatgcatgcagatagttacagtaccgcgtatatatagccactgaagtcataatctgaatggtaatggatctgtactcctgtagagtggtcagtatagaacatgcggtgagccaatgaggcattagtgccaaatggtgagggaatgtccttaccatcgtgccatgtcatgagaattgcgttgagctaacagggagaactgaagtactgaactgttgttgtggccaactactagcaagtttagcaactgctttggacagtggccttgcctgtactagagaaaatgaaagggggcaagtgaaaagctaaagtgcatgctggaatcttctggatctggatgtcatctggacctttcgaaaattcgtatgtggatccagagtcaagacaaagtataatgaaaacaagtggccaactggtgagtatgctggggagcacgtattgttgtctggtatgggaataccactattactacatggacacatgagtacagtacacacatctgtatggttttatccaaatttttcttgacatatttttttgtcatataaaaccattttgcgaacatggctaacacgtatgaagtcttggctgtgagagtctagtgattctgtgtatatttgcttacctgtttaaggaattgactggtacaagaagtactgaatggaagctctgaatttagttgactgacatactataagttaggataccttttaggctgatattcaataggatgtctcagactaccgcaggtaatgataattttgtcgtccgtagtactgtgtattgtgctctgttttgcagactaatgatgtatactagaaaaactagacattgttcattcatatggagctaagaattcaacttattagtattagaacttctctttgctgtcctattgtatcagacctattggcaaagttctagatctactgcaagccaacagcatggctgttctgtgatgagaggtcaatgtttcccatggcatgtgctagcatagtttcatgggcttaacatcgctgcaaattgatttgggcattttctgctttactggtcctcaaggatcctttgagtgggtaattttgtacctagtcagatgattatttacaggttctagtacaatgaccaaacaaaatttttcttcaacttccccgcaaaaaaaaataaataaataaaaattcttcaacttttcacaccactcttcagaatcacatcacatggtgtagttttcttttcaaagtagaaaggtaggaatggatgacactgttttgtacattctttgttttctcgtaaccattttatgagcacctgtttaacatttctattgagtttttttaaaatattttcctaacagacctatactttttgttgtgcaggtcacgatagctgcatctttccaggaaggtatatagctgaatatcttctccgtaaaatttatttttttcatagcaaggtatcttagggtagaaaagaactaaccactgagtgccacagagtagggacataacagggtaatgttgggatatgataaaacagtaaaattataaatgttccacgaaccttctctttactttgaaaaaaaaaaaaactgttcgatgcacttataagtaggcccgtataaaatgctagggaactttgctaagcaagaatgctgacaatttacatttgcttccatgtgttacgagaaaatttaacagcgaacatagtttctactgaccattctgaacttctgaattgaagaactagttaatatgctactgttttcttgagttaaataaatcttttgtgcatatcatacttgtatttcacacaatacctggacttgtgctaatggtgcaaattattaccatgcagcaagctgttgagcaacgtcaccaaatctgacggggcaaacacaaccactgcgcagacgagtgatgcagagggctctgcaatatggaggctaagaactggaagggagacagggttcttgttcatcctccggtggttgttgagcttgtcagtggtgcttatcacgacgaattcaaacttttggacatgacaagagcatgtagattgtaacaaaaatggaatttttgggatgacactttagaggagcaggcaggggctgtatgtttagtgattctttattgttagataagcgtcaataaatcattcttcttttct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0510200, RefSeq:Os07g0510200