BGIOSGA012322

From RiceWiki
Revision as of 15:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA012322

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012322, complete gene.

LocusTag

OS03G0274000

Ensembl Transcript ID

BGIOSGA012322-TA

Ensembl Protein ID

BGIOSGA012322-PA

Length

4777

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9873700..9878476

Sequence Coding Region

9873700..9873815,9874596..9874689,9876086..9876202,9876672..9876744,9876820..9876938
,9877054..9877175,9877262..9877438,9877674..9877818,9877943..9878121
,9878227..9878476

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9873700..9878476 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9873700..9878476 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATCCAAGGACGGGAGTGGAGCCGCCTCGTCGGGAGGCGGCGGGGGCTTCTTCTCCTCGATCGCCGCCGGCGTGCGCAGCTTGGGCACCGCCGTCCACAAATCTGTCAACGGGTTGGTCGGCTATGAAGGACTTGAAGTTATTAACCCAGATGGAGGCACAGAAGATGCGGAAGCTGAGGCTTTGAGAGGGCGATGGAAACAAGAGGATCGTGATAGTTATTGGAAGATGATGCACAAGTACATAGGGGCAGATGTTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTTCAGAAAATGGCAGAGTTGATGGAATACTGTGAACTTTTAGACAAAGCAGATGAATGCGAAGACCCGTACATGCGTATGGCATATGCCTCTGCATGGGCTGTATCGGTCTACTTTGCATACCAGCGTACCTGGAAGCCTTTCAATCCCATCCTTGGGGAGACATATGAGATGGTTAACCACCAGGGTATTTCATTTATTGCTGAGCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAAATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTCTGGAAGTTTATCCACTTGGAAGGACTAGAGTGTCACTTAAGAAGTCCGGTGTCAAGCTGGAATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATTCTCCTGGAGAGATGGTATTGACAAACCTGACAACTGGAGACAAAGTTGTGCTTTTATTCCAGCCATGTGGCTGGTTTGGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGA</cdnaseq>

Protein Sequence

<aaseq>MGSKDGSGAASSGGGGGFFSSIAAGVRSLGTAVHKSVNGLVGYEGLEVINPDGGTEDAEAEALRGRWKQEDRDSYWKMMHKYIGADVTSLVTLPVIIFEPMTMLQKMAELMEYCELLDKADECEDPYMRMAYASAWAVSVYFAYQRTWKPFNPILGETYEMVNHQGISFIAEQVSHHPPMGAAHCENAHFTYDITSKLKTKFLGNSLEVYPLGRTRVSLKKSGVKLELVPPLTKVNNLIFGRTWVDSPGEMVLTNLTTGDKVVLLFQPCGWFGAGRYEVDGYVYSAAEEPKIMITGKWNQSMSCQPCDQEGDPLPGTELKEIWRVAPTPPNDKYQYTHFAHKINSFDTAPKKLLASDSRLRPDRYALEKGDMSKSGSEKSRLEEQQRAEKRTREAKGEQFTPRWFNRTDEIAPTPWGELEVYEYNGKYTEHRAAIDSSSVADDDTDVTSIEFNPWQYSSSSSQ</aaseq>

Gene Sequence

<dnaseqindica>1..116#897..990#2387..2503#2973..3045#3121..3239#3355..3476#3563..3739#3975..4119#4244..4422#4528..4777#ATGGGATCCAAGGACGGGAGTGGAGCCGCCTCGTCGGGAGGCGGCGGGGGCTTCTTCTCCTCGATCGCCGCCGGCGTGCGCAGCTTGGGCACCGCCGTCCACAAATCTGTCAACGGGTGAGTCTTCCCCACCCCCCTCGCGCCGGTCTCTCAGTTGCTTGCAACCCCGTGCCCTCTCAGATCCCGACCTGAGCTCCCCCGATTTGTTCACCCCCACTTTGGGCTGATCGGTTTTAGGATTGAGGCCTTCTCGCCCTCGTGATCTGGCGCTTCAGCGCCTGATTCAAGCTGGTGGGCGTTGATCTCTGCCGGCGGGGGTTCTAGACGAGTTTTGAACCGCGTCGTTTCATTGAATTTCAAGCTCTGGGCTTTACTGATCGTAGTATGATGTGGCGTCAGTTGATTGCCAACTTATAATTCTTGTTACTGAGTTATCTTCTGTACAGACTCCTAAGATATATAGTGGTATGATCTGCGTGTTAAATATGCCAATCCATCAGCCCTTCAGGCTCATACTTAGTACGACGAAGTGAATAATTGGTTATAAAAGCTCAGTCATTTATTTTCTGGATGCTGTAGTATATACCAGCCGCTAGCATGAATTGTGATTTACAGTCTATTTTTAACTCTTCAACCTAAATAAGATAAGATGTGTGATGTGGTCTGTACTTAATTCTCATGTCACATTTTTAGTTAATGAAACCCACCTTTTACATGCATAGTATTTGGTGCCTCTTTGCTTTACTTTATTAGTATTTCTTCTGTTTTAGTCTTGAATTCTTCTTCAACTTGCACATTTATTGGATGTGTGCTAAGCTCTGTTGTCAAGGGACTGTTTTTAGCTGGAAAAACAGTTTGTCATGCATTTTGTAACGAGCAGTTATGTGCTGTACATAGGTTGGTCGGCTATGAAGGACTTGAAGTTATTAACCCAGATGGAGGCACAGAAGATGCGGAAGCTGAGGCTTTGAGAGGGCGATGGAAACAAGAGGTGAGAATCACTGAAATGTCAACAAAATAGTAATTTTATTTCTTGAAATACAAGCATGTTATTAGACTGACCATTGTACTAGTTTATGTGTATGTCAATTGTGTAATTTTGAATTAACTACGGTCAACAAATGGTAATGTCATGTATGGAAAGAAAAGCATATACTTTTTTTATACAAGCTGTGGCATATGTATTACAGACACTATTCTGGATATGTGTTCACCAATCACCATCCTGCAAGTGGCAGTAAAAAATAGTTAGGATGAAAATGTTTGAGAACTTTTCGTAGCTAAGTTTCTTAGCACACCCATTGCCTATATTTTGGAGAAATTATATATAAAGTTTCAGGTTTTTATTGGAGAAATTGGCTAATGGTATTTCTGTAATCTGTACTTCTTTTACTCATACAACCTGTTCTTAATAACATCTAATGTTGGGGGCTGCTTTAGTGTTATATACTTGTCTTTATGTTCTCAAAAGCCTTTGTATGACAAATGTTGGACATGCTCGACAAAATTGTACTATGTTTGGCATTAGTGGTAAGCATTTACATGTTTTAACCTTTGCACATAACAATAATTTTTATTAAAAAATAAACCTTCTTTTACCTCATATTAGTGAATTCTTACTACTCTTGGTGAGGATACTCTTAAGTCTTAACTAGCTAGATTCCACTGTTTTGTGCAGCACAACACTGAAACGCAAGCTAGCTTTCAACGTTTATTTACTGAGTGACAGATTATTTCTGTTGCATTAGCTTATAAGTATGTTCTAATATATGGGTGTTTCAAAACCCCTAAAGCACACGTAACAAAGCTGTAGTTTTCTCGTCTCTATTTCCAGATTTATCTTGTATGTGCCCACAGCTGTCATTTGTATATCATGTGCACTCTTCACAATTCCTTCATGCTGCAGCAGTTTTACTTGGATTAAGATTTGGGATTTCACATGCACACTGATGTGATTAAATGTCTGCCAAAAAACTGACTTGTTTAGTCGATTATATCCTGCCTGAATTATTGAACCTGCTGGATACTTACTGATGTCGTATTTATAATTTTTATGGTTCGTTCATGATTCATGATCCATATAGGGACGTGTTGAGATTCTATTTTATACTGTTCAAGTAGACATGTAGTATGTAACATCATTATTCAAAAGTTGAACCCTAGTTCTACTTGTGATGAGAAACAGGCAATTTGCATTACTTGCAGTTGGCTTCATCAAACAATCATTTTTGTGCATTTTGTGCCAAAATGTGTGATAACCTTCAGTTGGGCTTGAATTGGCATACTAGATCTTTCTAGAGGATGATTGGAACACCTTTGTATTTCAGCTGCACAGTGTTCTCGTGTATATCCCTTCATATGCTCTTGACATTCCAATTAATCTGCAGGATCGTGATAGTTATTGGAAGATGATGCACAAGTACATAGGGGCAGATGTTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTTCAGAAAATGGCAGAGGTTTGTACTGTTAAACTCACATTTAGAGCGCAGTAGCCTGTGTTCGTCTTCTCATCCTGTGCATTGGCAGAATGTTACGTTCATTTGCTTAGCGTAGTATGTTCCCCAACATATTAGCATGCTGCCCCTTGGAAAACTATTAATCTGGTGAGAACTCAAAGTTGCCATATAGTCTTTGTCTTGTTTCTTGGGCATAAAATCTAAGCTATTATTATTGTTCACTGAAGCATATATGTTATATAGTCATGGACTGTAAAGCAACAATTTCTTGTTCACAGGATACTTGTTATATCTGTATGTCAAAAGTCAAACAATAAAATTCAGGAACAAGATACTTTTGTGAGAATCTATTGTTAATTACTGTTGCAAGCTATAATTTGGCCAGTCATCCTTTTGTGCATCCATTCTCTTCCTGTTAAAGTCTTAATACTCGATTGCTAATGATGTTAGCTGCATGTTCTGAATGCAGTTGATGGAATACTGTGAACTTTTAGACAAAGCAGATGAATGCGAAGACCCGTACATGCGTATGGCATATGCCTGTAAGTTTTGCACCTTCCCTCGTGAGCAATGCCTTTAATATCCTTGTTGTTTGATCTTTTAACTTAACTTTTCAGCTGCATGGGCTGTATCGGTCTACTTTGCATACCAGCGTACCTGGAAGCCTTTCAATCCCATCCTTGGGGAGACATATGAGATGGTTAACCACCAGGGTATTTCATTTATTGCTGAGCAGGTTAGTGATATCACCATTGCAGAAACCTTCTGCAAACATCTTCTGCCAGCCAATGATGCTGGTTCCACAGTTCTTTACTGCATGCCATCGATAATTTTTCATTTTATTTTCTCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAAATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTCTGGAAGTTTATCCACTTGGAAGGTAATTTTGTCAAACTGTGATTGTTTCAGGATTATGAATAAACCAGCTCTTTATATCCTAAATGGTTTTTTGTTTCTGCATCACAGGACTAGAGTGTCACTTAAGAAGTCCGGTGTCAAGCTGGAATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATTCTCCTGGAGAGATGGTATTGACAAACCTGACAACTGGAGACAAAGTTGTGCTTTTATTCCAGCCATGTGGCTGGTTTGGGTATGATAACACTAATCCTGACTGTCTACTGCAATCTTCAGCCTTGAATTAATATTGTAATTTTATGTTTCCTTCGTTTTAGAATTACATTGAATGTTCCTGATTCCTGATTTAGTTGGGAAGGTGGTGGTATTAATTCAAATATATATTTTTTTATCTCTTGCCTTTGCCTTTGTAGTGTATCCAAAGCTTTAAGTTCATAATGCTTAATTTCTGAGTTTACTCTTCATTGTAGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGGTCAGAATTTCTTCGGATGTCCATTATTACACAGAACATTTGTTATATAAAGGCAAAGCTAATTAATACTTCTATAATAACTGTGGATATCTTCTCAACTCTTCAACATTATACTTTGTCCCAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGTAATTGCTCATTTTGTCCTAAACCTGCATTGTTTTAGGTGTTTAATTTGAGGCATGTGGCAACCATCCAATTATCTTGACATTTCATTTCGTGGAAACTTTCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012322