Os07g0515100

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Revision as of 08:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0515100| Description = Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2)| Version = NM_001066310.1 GI:115472352 GeneID:43433...")
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Gene Name

Os07g0515100

Description

Calcium-dependent protein kinase, isoform 2 (EC 2.7.1.-) (CDPK 2)

Version

NM_001066310.1 GI:115472352 GeneID:4343373

Length

5430 bp

Definition

Oryza sativa Japonica Group Os07g0515100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20429174..20434603

Sequence Coding Region

20429414..20429491,20429580..20429679,20429907..20430034,20430122..20430289,20430360..20430472
,20430557..20430709,20430819..20430962,20432447..20433164

Expression

GEO Profiles:Os07g0515100

Genome Context

<gbrowseImage1> name=NC_008400:20429174..20434603 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:20429174..20434603 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtcgtgttgcagcagagctacgtctccagattctggtcgaggaggagcaaacggttatggctattctcaccagacaaaacctgctcagacaactcctagctataaccatcctcagccgccgccgccagctgaggtgaggtacacaccatcagcaatgaaccctccggtagtcccacctgtggttgccccaccgaagcccaccccagacacaattcttggaaagccgtatgacgatgtgcgctcggtttactcccttggaaaggaactcggaaggggacagtttggggtgacatacctgtgcacggagatcgctagtggtaagcagtatgcttgcaaatccatctctaagcgcaagcttgtgagcaaggccgacaaggaggacattcgccgggagattcagatcatgcagcacctatctggacaacaaaacattgtcgagttccggggagcatatgaggacaagagcaatgtccatgttgtcatggagctctgcgctggtggggagctgtttgatcggatcattgccaaggggcactactcagagcgtgcggctgctaccatctgcagggcagtggtgaatgttgtcaacatttgccattttatgggagtgatgcatcgtgatttaaaaccggagaacttcttacttgcaaccaaagaagagaatgcaatgctcaaagccactgattttggtctctcagttttcattgaagaaggaaaaatgtatagagacattgttggaagtgcttattatgttgctcctgaagtccttcggcggaattatggtaaagagattgatgtatggagtgcaggcgttattttgtacattcttctcagtggtgttcctccattttgggctgaaactgaaaagggaatatttgatgctattcttcaaggggagattgactttgagagtcaaccatggccatcaatatccgagagtgctaaagaccttgttagaaagatgttgacacaagatccaaagaaaagaattacttcggcccaagttctccaacatccctggctcagagatggagaagcatctgacaaacctattgacagcgctgttctttctaggatgaagcaattcagagcaatgaacaagctgaaaaagatggctctgaaggttattgcttcaaaccttaatgaggaggagatcaagggcctgaagcaaatgttcacaaacatggacacagacaacagcgggaccatcacatatgaagaactcaaagcaggattagccaaacttggatcaaagctttcagaagctgaagtaaagcagttgatggaagctgctgatgtagacggcaatggatccatcgactatgttgaatttatcactgccacaatgcatagacacaagctcgaaagagatgagcatttgtttaaggcattccagtattttgacaaagacaacagtggcttcatcacaagagatgaactggaatccgctttaatcgagcatgaaatgggcgatacaagtaccataaaggatattatatcagaagtcgacacggataatgatgggaggattaactacgaggaattttgcgctatgatgagaggaggggggatgcagcagcctatgaggctcaaatag</cdnaseq>

Protein Sequence

<aaseq>MGSCCSRATSPDSGRGGANGYGYSHQTKPAQTTPSYNHPQPPPP AEVRYTPSAMNPPVVPPVVAPPKPTPDTILGKPYDDVRSVYSLGKELGRGQFGVTYLC TEIASGKQYACKSISKRKLVSKADKEDIRREIQIMQHLSGQQNIVEFRGAYEDKSNVH VVMELCAGGELFDRIIAKGHYSERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLA TKEENAMLKATDFGLSVFIEEGKMYRDIVGSAYYVAPEVLRRNYGKEIDVWSAGVILY ILLSGVPPFWAETEKGIFDAILQGEIDFESQPWPSISESAKDLVRKMLTQDPKKRITS AQVLQHPWLRDGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQ MFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITAT MHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIKDIISEVDTDN DGRINYEEFCAMMRGGGMQQPMRLK</aaseq>

Gene Sequence

<dnaseqindica>5113..5190#4925..5024#4570..4697#4315..4482#4132..4244#3895..4047#3642..3785#1440..2157#acgagcagagcaggaagcaacttgaaactgcaagctttcctcttctttcttctttctcaacaaacccaaacccagttgcagctggcaggcagctgcgctcttctttttctcctcattgttttcctcgcgtggtctcccgattcgtgcgccgtgtgcatcgccattagtagtcgctgtcacgatcgaggatcaccacctctctccagctccaaatccacctccccccccccccccaccaccaccaccaccaccacgcggtcgccgcgccgagctgtcctcccccacgccgagatttgattcttccttcttcttgttcttgcgccaccgcggattcttgtaccagctgacactaccggggcggtggctgtgctccttggattgttggattggttggtttgggaaaggttaggcgccctcctttcgcttgggtacgcgtctctctgtttttcggttcttggtttgtttggttcgagaggcttgtagtctcgcggatttgtttttcgttgcagagattattaggagttaatctgttcttcttggaaggaggttcagtgattgaggatttgatccaactgtgagaaaaatcttggcccttttggatctgggagcggtgcaaagctactggagcgcctcacatgtccacaagtgctcgattttagcagtttcatgggttatgttcttggattcagtagatttctgatgcagacagtaattttttaccgaacaagtaatcggtgaatttacagttttttctttctttctttattacgagaggacgaagctctagttcactgtaccttgtttattatcgcttcctcctcgtgtaaaggatcaatttttacgatagcgatcgtgagtggtttagctccccctctctctctcttgccgctgggtgccttgctggtcccgttgctttcagatgctgctttatttgtctccttttgcccaatttgcgtgtacccttgtgcccttatctcctatggttgcttccactgtcaccaaagggggactcgccatctaccttgttcctcagttcatgcgaatttcatgcggtcctgggctgtgactgggagtagattgaggtcaatatgctgtcaaaggcatttcttttcttttccttttcgttgcttgttttccccttctgatgttgtgtgttgagtttattgtttggtttgctggtagatccagtatttggatcatttttccttttttttttctttcattgcttctgcggagggatgagtttgtgcatgaatcttttgttggttggattcgcttagttttcacactagtcctttgattcagcgcaaatctttgttaattggctcgcttaattctgacataaagtgttccttcttgggttctgcttgcagggttgatctcgtttgcggagtaacaaatttgcaagcctacaactgctagggagaatttgactaaaaatggggtcgtgttgcagcagagctacgtctccagattctggtcgaggaggagcaaacggttatggctattctcaccagacaaaacctgctcagacaactcctagctataaccatcctcagccgccgccgccagctgaggtgaggtacacaccatcagcaatgaaccctccggtagtcccacctgtggttgccccaccgaagcccaccccagacacaattcttggaaagccgtatgacgatgtgcgctcggtttactcccttggaaaggaactcggaaggggacagtttggggtgacatacctgtgcacggagatcgctagtggtaagcagtatgcttgcaaatccatctctaagcgcaagcttgtgagcaaggccgacaaggaggacattcgccgggagattcagatcatgcagcacctatctggacaacaaaacattgtcgagttccggggagcatatgaggacaagagcaatgtccatgttgtcatggagctctgcgctggtggggagctgtttgatcggatcattgccaaggggcactactcagagcgtgcggctgctaccatctgcagggcagtggtgaatgttgtcaacatttgccattttatgggagtgatgcatcgtgatttaaaaccggagaacttcttacttgcaaccaaagaagagaatgcaatgctcaaagccactgattttggtctctcagttttcattgaagaaggtaacttgaataatttaagatgcatatgcttgagaattacaccttctgctgtacaggctatattgctagggctagaatttcataaatggccatatttctagtttgaaaagtttttcattttgtttattctgaattatggagaatttgcctatcacggtatgttatgggccaccgttttgtgacttgaatcatatcgtaattctaagttgtctcacaaacctacttaggattcacagagacagctaaagttgctgtttttgggttggtcgttacaacatctatatttatccttgtatccttcaacctaatatctgcatctttgtatgatatgagacatctgtttctataaatgacatggttccacaaaatttattggtaaaatgaaattattagcaccatgttattattactgccatagtgccattccaaggtattcattctttaaaggcatggaggatgatgtagcaagcaccatctgttgtattagctcatatgagaaagtcctccctagccactgaggttaagactgcttgaccattgattgttatcgactccaagtagtggaaagatgcaaatgggatgtaaatgatagcaaactagttgtcactggctgttacttttggggaggtgtataactattgtacacattgacaaatatattagagcttttatgctacctgaaaactaagttgaacaaatttaaagtattatattttggtggtggggttgcagatgctggtagctggtgctgggtagttgcaaataacacctaaatgtgctttaagcttcctgcttttcaaatgtggggaaagcatggaaacttttccacatgactagttaccaaataatgatgttcttttggtagtggtatggcatggtatggtggtagtgatgaggatgtgatggaggcagagatagttcctaacttcctgtcttctcttctttccttgtacattttcatcactgccggtctgcatgtccgaccctgaatacaaaatactgccatgatttattttacagctttgcgttacatgattttttttttgtcaaagatagcatgtaatctctattttttggcatactctcttctatatttggtgtgtggggaatgtgtagtaagccctaaccaccttccattctctgtaatccttcccagttatcatctagggtttatttaattgatattggcccgctgtgattgtgtgtgagctgagccattttccctctctctttacattcacattttttatcttgacagtttatcatgttctttttaaaatgcaagcaccagccttcatcaatttgtattttgtctgattcattaaccaaatagaattcgatgtgacaaactatgtatattttttatgatcaatattataatatcccaagtttccaacatttctatcattattactatctaaaccataattgttgcataccatatatcctgttgttcatgtatattgacttccttcaaatatcaggaaaaatgtatagagacattgttggaagtgcttattatgttgctcctgaagtccttcggcggaattatggtaaagagattgatgtatggagtgcaggcgttattttgtacattcttctcagtggtgttcctccattttgggctggtacgtttgcttataccatccatttttacttccagttcataaatccatatatacaattaagcagtggtgcattgtttgattgttattaattttctgttttgctttccagaaactgaaaagggaatatttgatgctattcttcaaggggagattgactttgagagtcaaccatggccatcaatatccgagagtgctaaagaccttgttagaaagatgttgacacaagatccaaagaaaagaattacttcggcccaagttctccgtaagcttcttgagtcttaaccatacattaaactcctaatattagtccaaattgcaaaagaaatgatggtttctatgttatcagaacatccctggctcagagatggagaagcatctgacaaacctattgacagcgctgttctttctaggatgaagcaattcagagcaatgaacaagctgaaaaagatggctctgaaggttattattgtcatgccgataatttagttgccttttcttctctcgtgcttacaggcaattgtatatgcaggttattgcttcaaaccttaatgaggaggagatcaagggcctgaagcaaatgttcacaaacatggacacagacaacagcgggaccatcacatatgaagaactcaaagcaggattagccaaacttggatcaaagctttcagaagctgaagtaaagcagttgatggaagctgtatggcaccaatcctagactgttacagtatttttctgaaccatggtttattgaccttttatgctgaccttctctgatccattccaggctgatgtagacggcaatggatccatcgactatgttgaatttatcactgccacaatgcatagacacaagctcgaaagagatgagcatttgtttaaggcattccagtattttgacaaagacaacagtgggtgagtattctgaactgtcacattgaaaaaaactcacaagtcgcagtattttcacaatggcagtccgccaaatatgattatgatcataattcacaggttcacattttataatatctagtgctcactagtctagaaccatcattggaaaaaggcagttgtacaatgccatctgcgcatcaaactccccatggttgatctgactagagaattacctcaattttatgcagcttcatcacaagagatgaactggaatccgctttaatcgagcatgaaatgggcgatacaagtaccataaaggatattatatcagaagtcgacacggataatgtaagttcctttgccaaacaatcggtttttccatgccacattacaatttccttccatgacagtgattcttatttttggggtattacaggatgggaggattaactacgaggaattttgcgctatgatgagaggaggggggatgcagcagcctatgaggctcaaatagtctgtttccttgtagaaaatgatgtacaattacattagtaaactgttttcgccttcttttttttgttccatggatggtagtcgacggataaaaggtttaccctggacgcagcttttgcattgttgagatgattgtgtatattttcttgccttgcccgtgtatggtgtagtgatttgaatgtcctcccttttgtaagttgtttctgcaagtacacacaataaaagagcatttttgcacctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0515100, RefSeq:Os07g0515100