Os07g0520400

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Revision as of 08:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0520400| Description = Conserved hypothetical protein| Version = NM_001066337.2 GI:297607320 GeneID:4343400| Length = 6187 bp| Definition ...")
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Gene Name

Os07g0520400

Description

Conserved hypothetical protein

Version

NM_001066337.2 GI:297607320 GeneID:4343400

Length

6187 bp

Definition

Oryza sativa Japonica Group Os07g0520400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20747328..20753514

Sequence Coding Region

20747552..20747746,20749098..20749970

Expression

GEO Profiles:Os07g0520400

Genome Context

<gbrowseImage1> name=NC_008400:20747328..20753514 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:20747328..20753514 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tacaattttcaggatttcatgggaggatctcatgacagtatggttactttagagaaccgagtgcgtggtcttgagagagttgttgaggaaatggccagggatatatcactatcatcaggcaggagaggtggtggccccatgctgggctttgattcatctcctggtagatcatctatgaaatacaatggttttcatgaatattctaattcaaaatttgggagggatcgtgatggacgggtgggatttgcagaaaggtacttttctggagatggtatgtcttctggtgtaagaagctctgaaccatgggactcgtatgcttattctggatcaagaagtggtatgaatgccaggagagggttggactctgtttcatctgataacagggtgcctagaaatgaacgaagcaatgatcaagcaggacctaggcgaggatgggacaaaggacagggtccatttaggtttggggagggtccttctgctcgaagtgcatggcgagcctccaaagatgaagcgacactggaagctattagggttgctggtgaagataatggaacttctagggcagctgcgagagttgctatccgtgaattggatggggaaactttgaatgatgataatcaaggggatgaaagaggaccaatttgggagtcttggactcgtgcaatggatgcgatacatgttggtgatatggattcggcttatgctgaggttctttcaactggggatgctgaattacttgtaaaattaatggagcaaactggaccagtagttgatcaactttcaaatgaagttgcaaacgaagtcctacatgctgttggacaatttcttgtggaagaaagcttctatgatatagctttgagctggcttcagcagttgactgatctggtaatggacaacggatccggttatcttggaatccccctagatgcgaagaacgacctcttactgggattacacgaagctactgccattgagttgcctgatgattgggagggggcgacgccggttcagataatgaagcagctagcttcatcatggcggattgatctgcagcagcttatcagttag</cdnaseq>

Protein Sequence

<aaseq>YNFQDFMGGSHDSMVTLENRVRGLERVVEEMARDISLSSGRRGG GPMLGFDSSPGRSSMKYNGFHEYSNSKFGRDRDGRVGFAERYFSGDGMSSGVRSSEPW DSYAYSGSRSGMNARRGLDSVSSDNRVPRNERSNDQAGPRRGWDKGQGPFRFGEGPSA RSAWRASKDEATLEAIRVAGEDNGTSRAAARVAIRELDGETLNDDNQGDERGPIWESW TRAMDAIHVGDMDSAYAEVLSTGDAELLVKLMEQTGPVVDQLSNEVANEVLHAVGQFL VEESFYDIALSWLQQLTDLVMDNGSGYLGIPLDAKNDLLLGLHEATAIELPDDWEGAT PVQIMKQLASSWRIDLQQLIS</aaseq>

Gene Sequence

<dnaseqindica>5769..5963#3545..4417#tttcgccctctctctctctctcgcctccgccctcctcgcctttctcccccacctccacctcctccgctcccgaggcgagatctcgccgccgccgccattccccaatccgccccaaaacccccaccccccaaaccctccgatcgatccgagggaggagccaatcccgcgctcgaattcgttcgccccgaatcagccgctggatgcgtcgagctcgaggcggcggaattcaaatctgagctcgccgttggcgcggatccgacggggatggcgacggcggtgtcgaagtcggcggctaagccgcaccccaggtcgcccaccaccgcgcagccgccgaacaacggctccgcggcgggggcggcggcggggggcgggggcggtggagtgggtatggggcccgcgggggcgacgccgtcgaagaacgcggcgatggcggagctcaagtcgagggtgctcggggcgctcgcgaagctctccgacagggacacgcaccacatcgccgtcgaggacctcgaccgcatcatccgctcgctgccgtcgcccgacgccgtgcccatgctggtgcacgcgctggcgtcggactcgccgggcctcgcgtcccccgcgcggcgggagtcgctgcgcctcctcgccacgctctgcgcggcgcaccccgacgccgccgcgccctacctgcagaaggtgatggcgcacctcgcgcggaggctcaaggacaccaactcggactcctccgtgcgcgacgcgtgccgcgatgccgccggccagctctcggaggtgtacctccgacccctggcggcctcggctgccgctgaagcgggcaatgcgactgtcacactgttcgtgaagccactgtttgaggcgatgggggagcagagcaaggcagtgcagggtggggcggcggcctgcctggcaaagacggtggagggcgcggggcctggacctggcgtggtagggatgtttgggaagattggtccgagggtttgcaaattgcttggtggacagggagtacaggctaaaggggcacttctcaccatcatcgggagcttgtctcaggttgggattgcgcgatatttttctttatgcatgcaatatgttcgatgaattgacttgacagatgccaggtggtagaaatttgtggtagacattactaaattgattatttttcatggacatttagttttctgtctgaatatgggaaatgttatcataaattgtggccaaggggtaggaattgtttttgtgataagtgatgtttggtgctgccgctgcggtcgaatgtagttcatcatgtaatcagttttggatgttgcctatatgtcttgctgacaactatatggttggaaattgttcgtgttgtgaagaatggtgagttatcattgagacaagggtttgatattttcaatcattattacaatgtgccattttgttttgcacctctgaatttatggatggttaggacttaggagtttagtatttgatatcctaccattgggtacataagactgttgttacttttgtgtggtgtttggccccatgaacaatggatagtaccacagcattgtgatttaatgtttagataagcgaataattaaccttttgctttgcctctggtagccttttattctttttagtacttcagttgaaacattgaactgaaacatacattgatgctctaagcgaatgtgtctcctaacacatgctttgaatggtactattgggaatactgtgccaagcattactgtgcgatacatatcttataaatctctgcaatgacataacatcagattcactagctctccttgtttgaataattgttgatatatttcttgtcaggttggagcaatcagtcctcagaatatgcctcaaacattgcaaagcattcgtgactgtctcgagaacagtgattgggctactagaaaagctgcagctgatacattgtgtgtcctggccacatattcaggccgattgataggtgatggaacagctccaacaatagctgctcttgaagcttgtcgcttcgataaggtaactaaaactttaactcactcaacccaaactgaaggatctgttgctcttccatggatccttttcagatgatgacaagtcattgttacatgcattatgttgcattaagttgttcttgtcaatccttttcaggtaaaacctgtcagagatagcatggctgatgcagtgcagctatggaaaaaaatggcaggagatgattcgaacggtatcaatttgttttttagtttaaaagtgcatgatgttatttaggattttattactctatgcttattgcaacataatttcattcaacagatggtaaaaataaggaatcagctgataatgaagggaaaatggattcacctaataacaatgacaaagtgaagggcagtagcatggctgaaaaagcagcagttctcttaaagaaaagacctacattaaccgatagggaattgaaccctgaattttttcaaaagctcgagacaagaatcacagatgaattagctgttgaggtggttgtaccccgcaaaactttacaatctcatttacaaagtgaagaggaaccagaagatgcagatggcgatcctgttggtccagctaacagcaatggatcagcagatgatgaagcaaatttgactcaactgcgttctagctctaattttcaaaatattcgagatagatgggctggccagagaggaagtagaaacaaagatgcaaaggttagggcatctgatgttgaagataggaatgaatctagtgcaaaagattctgcttcagcagcaatgaatgttcctggagaagggccttccttaaataataaaacaaactggttggcgatacagaggcagttgtcccacttggatagacagcagactagtctaatgaacatgctgcaggttagtgccatgtttatttattcccgtgaagaaattgttggaatttcttttttttgtttttctgttaagaaataattcttgaggagaaatgtccaggatatcacactttttttatgtcctaattggtaacatcagttttttttcttcttctgaatatgtaactatctgctaatgagatttgtcactgcttgctatgctttctgagattatattgtcatgtgttatgtttgtcttagtgatgtgctgctaggcatcttttggtgtcagcaatttcatgttgtcttctaaaagaaagtagtgctacgatattacacagtagcccaaataaagtgagcttacattatttagaacaaaacattatgttggctttagaagggatgttagtaggtagtagctttgatgtctatgtaatgttgtacattgctaaagtctacaaaaaagtactttattgatggtttatcaccgtttcttagtttgggtttgaaacagaaaatttcctgctttgttttgttgtacatgaaccttttttccagtaattcacaaatgtgatccgttgtgatgtactgatgtatgccatctctgaggacatggtttttagttaattgggtgtctgtgggctaactacctaatatcacttctttttttaatacaattttcaggatttcatgggaggatctcatgacagtatggttactttagagaaccgagtgcgtggtcttgagagagttgttgaggaaatggccagggatatatcactatcatcaggcaggagaggtggtggccccatgctgggctttgattcatctcctggtagatcatctatgaaatacaatggttttcatgaatattctaattcaaaatttgggagggatcgtgatggacgggtgggatttgcagaaaggtacttttctggagatggtatgtcttctggtgtaagaagctctgaaccatgggactcgtatgcttattctggatcaagaagtggtatgaatgccaggagagggttggactctgtttcatctgataacagggtgcctagaaatgaacgaagcaatgatcaagcaggacctaggcgaggatgggacaaaggacagggtccatttaggtttggggagggtccttctgctcgaagtgcatggcgagcctccaaagatgaagcgacactggaagctattagggttgctggtgaagataatggaacttctagggcagctgcgagagttgctatccgtgaattggatggggaaactttgaatgatgataatcaaggggatgaaagaggaccaatttgggagtcttggactcgtgcaatggatgcgatacatgttggtgatatggattcggcttatgctgaggttctttcaactggggatgctgaattacttgtaaaattaatggagcaaactggaccagtagttgatcaactttcaaatgaagttgcaaacgaagtcctacatgctgttggacaatttcttgtggaagaaagcttctatgatatagctttgagctggcttcagcaggtaaagtagtatgttccattgtaggaatataaaagttctgaagagacaggtgtttactctgacaacaatatcatggaaaatgttaacctgtgttcagactaaaactggtgttgatataataaaaatgacattctgtgttaaaagagtagaatgctctaaattgcttaggaatggatttaaacatattttgacagttgcatgctattttagcactactgctctggttccccttcctggttcaaagccagccattcatgatacatatgattagcattgcatttgcaaataggattatctgtagcatgtgatggtgatcggaagttttgtaaggctgaaaacatctgatactgataccgggtgtttcttcaatttccaatttctgcttagtatactcgccagttttcagacagtgtttgtgtctatagttttacacattccttgcattatcatttggctccactcttgatttgtgagttcaatttggtttcgtcccttataattcagcaaacaaaaaagagctttgaaaggttttgagttattaaagaatgctattttctttagtaacaagaatggagaaacaaggaatggcaaccacaataaattaatttttcattagctatatgcttatccaattgaagtaactgaagcactcttaagatgtcttggtaaaaaagtccatttggatggagactagaattttgactgatttacgcttggtcctttgccctctcaaacagaatcctggcttttcatttggtctagaatgaaggcctctcacttttactggattgctacaaggttgaagaaaaaatgattgtgaagtatgtgaaggatatttgatgctatcttcaatgatcaaatggccttctgtttgttggatagttgtttatgttctttgtttgctcaacaataccaataataattaaggttctgtctggacagcaggtatgcactggcatgcttgtgaaactaaacagttgcttcaatattgaaaaccaatgcaatactgtcatggtgcaacttatgttatgtccagacatacagaataagttagtaagttgtcagatgatggttataaactatagacttttgaatataggagttatgttgctctaacaaaaagtttgaaagaacgcgtagctgtcttttttctttttttggaagttagaaagggaggtagacttcttttattgaacagaatatgatgtactctccgtgctccagttgtttgtatagagatgttaaaacctttgtttggtccatgcatttattgttttgtttttggggataggaaaggagtattactttgaagtacatacccaagtgctgaatatcttgattgttgttgcagttgactgatctggtaatggacaacggatccggttatcttggaatccccctagatgcgaagaacgacctcttactgggattacacgaagctactgccattgagttgcctgatgattgggagggggcgacgccggttcagataatgaagcagctagcttcatcatggcggattgatctgcagcagcttatcagttagggccatcggttgttgacatgagttaatttcatttgttcatttctgcctattttttctctatatatcttgctattagggctataagtattaggtttgacagaacctttgagtggaactgtgttgacatggattggtgttgtacggggaaatatgatgttgatattgtttacctcataacctgtgttggctttcctatttataatttggaggatctcaatttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0520400, RefSeq:Os07g0520400