BGIOSGA012820

From RiceWiki
Revision as of 15:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA012820

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012820, complete gene.

LocusTag

OsI_11939

Ensembl Transcript ID

BGIOSGA012820-TA

Ensembl Protein ID

BGIOSGA012820-PA

Length

868

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17992858..17993725

Sequence Coding Region

17992858..17992860,17993000..17993206,17993483..17993725

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17992858..17993725 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17992858..17993725 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCTCGCTGGTGAAGCTGGGTGCGTGGGGCGGCGACCACGGCGGGAAGGAGTACGACGTGACGGTGGCGCCGCAGCGGCTGGAGGGCTTCTGGCTCCGCTACGGCAAGGTCATCGACTGCATCTCCTTCTCCTACCTCGACAAGGACAAGACCCTCCACACCGTCGGCCCCTGGGGCGGCCAAGGCGGCGTCTCCGAGGAGACCATCACGTTGGAGCCATCGGAGTACGTGAAGGAGGTGCACGGCTCGGTGGGGCCCATCGGGGACTACACCCACGTCGTCACCTCGCTCAAGCTCGTCACCAACCAGCGCACCATCGGGCCGTTCGGCAACGGCGCCGGCACGCCCTTCGCCGTCCCCGTCCTCAACAACGGCAGCGTCGTCGGCTTCTTCGCCCGCGCGGGGCCTTACCTCGAGTCCATCGGCATCTACGTCCATCCCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAGSLVKLGAWGGDHGGKEYDVTVAPQRLEGFWLRYGKVIDCISFSYLDKDKTLHTVGPWGGQGGVSEETITLEPSEYVKEVHGSVGPIGDYTHVVTSLKLVTNQRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIYVHPF</aaseq>

Gene Sequence

<dnaseqindica>1..3#143..349#626..868#ATGGTCGGTCCATGCTTGCTCAGCATGATCCTGCATCTCTTCTGCATTTGCATCCATGGCCAAATAATACACAGCTATTTGTACAGTTGTAGCTGATCTGTACTACTGTCTGATCGATTTGTATATATCTTTGCATGCGCAGGCCGGCTCGCTGGTGAAGCTGGGTGCGTGGGGCGGCGACCACGGCGGGAAGGAGTACGACGTGACGGTGGCGCCGCAGCGGCTGGAGGGCTTCTGGCTCCGCTACGGCAAGGTCATCGACTGCATCTCCTTCTCCTACCTCGACAAGGACAAGACCCTCCACACCGTCGGCCCCTGGGGCGGCCAAGGCGGCGTCTCCGAGGAGACCGTACGTAACTATACTCTACTCCCTCTAAAAAAACAAACCCTGAGTTTTTTTTTCCAACGTTTGAGTGCCCGTCTTATGAATTTTTTTATAATTAGTATTTTTATTGTTGTTAGATGATAAAACATGATTAATACTTTATGTGTGACTTGTCTTTTTAATTTTTTTATATTTTTTAAATAAGATGGACGGTTAAACGTTAGACACGGAAATCTAGGATTTGTCATTTTTTTAATGGAGAGAGTATATATGCAAATAAAATATAACAACGTTCCGCAGATCACGTTGGAGCCATCGGAGTACGTGAAGGAGGTGCACGGCTCGGTGGGGCCCATCGGGGACTACACCCACGTCGTCACCTCGCTCAAGCTCGTCACCAACCAGCGCACCATCGGGCCGTTCGGCAACGGCGCCGGCACGCCCTTCGCCGTCCCCGTCCTCAACAACGGCAGCGTCGTCGGCTTCTTCGCCCGCGCGGGGCCTTACCTCGAGTCCATCGGCATCTACGTCCATCCCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012820