BGIOSGA012821

From RiceWiki
Revision as of 15:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA012821

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012821, complete gene.

LocusTag

OsI_11941

Ensembl Transcript ID

BGIOSGA012821-TA

Ensembl Protein ID

BGIOSGA012821-PA

Length

6771

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18016219..18022989

Sequence Coding Region

18016219..18016255,18017515..18018194,18019076..18019624,18019719..18019955,18020475..18020582
,18022288..18022656,18022738..18022989

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18016219..18022989 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18016219..18022989 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGAAATTTGAAAAAAGAGGCCGTGCTGGCAGATGGAGATGAGGATAAGGATGAGGATAGCAAGGTGAAAGGGAAAGATAAGGGCAAAACTATTGTGGACAACGGGAAGGGCAAATCTGTTGTGGATGCTGGTGAAGTTAAAGCAATGGAAGTTGATGAAAATGCTGGTGACATGATGATTGTGGTTTATAGGGAAAGGTCACCTTTGAGGGAGAACTCACCTATGAGGGAGAACTCACCTTCTAGGGATACCTCACCCATAAGCACTGTCCTGCCTTCTGGCAGTGAGGATGATAGTGATTATGTAGGAGGAGGTGATTGCCCTTCTGAGGATGATGAAGAGGCTAGGGAGATAGAAAGACACTACAAAGAGTTAAAGAGGAAGATGAGAGCTGGAAAGGTTCATGAGCTGGATGAGGTGGTGTTTGAGGGGTTTAAAAGTCAGTCAGTTAGGGATGGTGCATCTCCAGAAGATGGCAATGACACCCCATATGCAGATAGTGATGATGATGAGTCTTATGATGAGGTTGCTAGTGATGGTGAGCTTGTCAGAAGGAAGAGCAAGTTCCCAAGGTTTAAGAAGCAGCCAGGGGTTCCTGTTTTTGAGTTAGGAATGAAGTTCAGCTCTAAGAATCAGTTCAAGAAGACCATTATAAAATATGCCCTGGATGAAAGGAAAGTGATTAATTTTATTAAAAATGATCACAAGAGGAGCACCACGTTATTTTTCGTTCTAGATTCGCCACTGGTTGCTAACCCTGGATGGCCACTATCCCATATGAAAGCAACAGTTCAAGAAGAGATGTTTACTGATGCTTCAATTTCCAAGCTTAAGAGGGCCAAAAGACTTGTGATACAGAAGGCCTTTGATGTGACTAAGGGCCAGTACCATAAGCTTTACAATTACCAGCAAGAACTGCTTAGGACCAACCCTGGTAGCACTGTGGTGATCAACAGAGTGATAGGGATTGAACCACCTGTGTTCAAAAGAATTTACATTTGCCTTGATGGATGCAAGCAAGGGTTTATGGCTGGTTGCAAGAAGGTAATAGGGCTTGATGGTTGCTTTTTCAAGGGATCTACAAATGGAGAGCTATTATGTGCTATAGGAAGGGATGCCAATAATCAGATGTACCCAATAGCTTGGGCATTGGTTTATAAAGAAAACAATGAAGAAAGGGATTGGTTTTGTGACTTGCTGTGCAGTGATCTAAAGGATGGTGATGGAGGTGGATGGGTATTCATCTCTGACCAGCAGAAGGGAATAATTAATGCTATCTCTAAGTGGGCTCTTGAAGCTAAACACAGGAACTATGCCAGGCATATCTATGCCAATTGGAAGAGGCACTTTAATGACAAAGAGTTTCAAAGAAAGTTCTGGAAGTGTGACAAAGCATCATGCATAATGCTTTTCAACTTGGCTAGAGCAAAGCTGGCCCAACTGACCCCTGCTAGAGCTCAAGCAATATTGAACACACACCTAGAGCATTGGAGTAGGGCGATGGGCGGTGCGATCTGGATGCGGCGACGCCAGACACACGAGCTCCATGATGCAGCGCACTGGCAGCAACTGCATAGATCTGTGATACACCGGCAGCCTGCGCAGCCAGTAGAGGGCATGACTAGTTGGCCAGATGATCCTAGAGAGCCCCTCAATGCCCCAGGATACATAAAGATGCCAGTGAGGCCTAAGACTGAAAGGAGAAGGGAGCCTAATGAGCCAGCTAAACCTACCAAAGCATCCAAATTTGGCACAATTATGAGGTGCAGATCATGCAAACAACCTGGTCATAACAGCAAGGGCTGTCACAAGCACAGTGGGGCAGGTGGTAGCACATCTGCAGCTGCAAATAACAACTTAGTGTTGTCAAACACACTTGGCAGCATTGCACAAAGCAGGAAAAGGAAGGCAGCTGAGCTCAGTACTAGCACATCTGCTTGCTACACTAGGAAGAGAACATCTCCTAGAAAAAAGGCAGCAAACAAAAGCAGTTCACTTGTGAAGGTTGCAGCCAATGCTAGGGTGACAACTGAAAAAGGTGGTTCAACCAGTGTGAACCTTCCGGCCATAGTGCCACACTCTCAGTGTTCTTCTGCTTCAGTGAGGATCACTTCTGGGAAAGCAAGTGTTTATGTGCAAGCTCAAGAACTAGCCACTACCAAGCCCAAGAAAACACCTGCAGGTCCACTGATGCTGATTCCCCCATGGGAAACTAACAAGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDGNLKKEAVLADGDEDKDEDSKVKGKDKGKTIVDNGKGKSVVDAGEVKAMEVDENAGDMMIVVYRERSPLRENSPMRENSPSRDTSPISTVLPSGSEDDSDYVGGGDCPSEDDEEAREIERHYKELKRKMRAGKVHELDEVVFEGFKSQSVRDGASPEDGNDTPYADSDDDESYDEVASDGELVRRKSKFPRFKKQPGVPVFELGMKFSSKNQFKKTIIKYALDERKVINFIKNDHKRSTTLFFVLDSPLVANPGWPLSHMKATVQEEMFTDASISKLKRAKRLVIQKAFDVTKGQYHKLYNYQQELLRTNPGSTVVINRVIGIEPPVFKRIYICLDGCKQGFMAGCKKVIGLDGCFFKGSTNGELLCAIGRDANNQMYPIAWALVYKENNEERDWFCDLLCSDLKDGDGGGWVFISDQQKGIINAISKWALEAKHRNYARHIYANWKRHFNDKEFQRKFWKCDKASCIMLFNLARAKLAQLTPARAQAILNTHLEHWSRAMGGAIWMRRRQTHELHDAAHWQQLHRSVIHRQPAQPVEGMTSWPDDPREPLNAPGYIKMPVRPKTERRREPNEPAKPTKASKFGTIMRCRSCKQPGHNSKGCHKHSGAGGSTSAAANNNLVLSNTLGSIAQSRKRKAAELSTSTSACYTRKRTSPRKKAANKSSSLVKVAANARVTTEKGGSTSVNLPAIVPHSQCSSASVRITSGKASVYVQAQELATTKPKKTPAGPLMLIPPWETNKL</aaseq>

Gene Sequence

<dnaseqindica>1..37#1297..1976#2858..3406#3501..3737#4257..4364#6070..6438#6520..6771#ATGGACGGAAATTTGAAAAAAGAGGCCGTGCTGGCAGGTAATACGAAAAGGAGGAGTATGCGTGTACTGTGCTGCAGCGTGCAGGTGTGCAGCACTGCAGCCTGTAATACGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTACTAAATCAGTCCGTAGAAGGTCCCTCGGCAGTATTGACTCAGTTTTTGCCCGGTTTTGCTGACGTGTCGCGCTGTGGGACCCACTAGTCAGTCCGCCGTTGGGGAGTTAATAGACGGGGTTAACGGAGGGGAGCGCAGCTAGCCAAACCTCCATTCTCTCTCCTTTGCTCGAACTCTAGCTGAGCGGCGACCAGGAGGCGACTTGAAGGCGACGGCGGGTTTGTCGGCGGCGGCGAGCTGGCCATGGCGCTGGCGACGAGCATCGTTTTCGTCCAAACGCGTGGCGGATTCCACCTGGTTAGTACCTTGTTGGCTCGGCATTGCGTGCTATTGTAGCTGGTACTGTGTTGATTTTGGGGAAAGATTTAAAATGTGGTAGATTCGTTTTTTGTCTGGGATTCGGTGTGAAGGTCAAGTAGTATATTGTTCCATATGCTTTAGGTGTACTAATGCTTTTGTATACCCATTTGAATCTGGGTGGGTTAGTGTTGGGGTGGTCCTTTTTTATTCGGTATTAGGTGTTAACTAGGTATTAGGGATGTGAATGTAGTGTAGTTTTAATAGTAGAGTAGTAAAGTGCTTCTTTTTTAATTTTTCAGAGCTGGCAGTGTGGATCCCTTGGGCACTCTTGCAGCTAGGTTCCATTTCAATGGGGAATTTGTCAATAGAGGAAGACAAGTTGTATTGTGGGGGGAGAGAAGCTATGTCATACATAGACAGGGATAAAGTATCATTACCTGAAGGCAAATTTTGCTACAGGACATCACGATTTTGTGGTTTTAGCTGTAGGACATCACACGAACTCACTTTTGGGGAAAACCACTCTCTAAATGTGGTTATTTGCCAGCAGACACCGCGTCTATTATAATAATGTAATCGTGCTGACGAGGCAATATGGGGCCCAAAATTTTACGCGGACTGACCAAACTGCCCCTGCACGTTCAGATGATGTCTAGCAGCAGCTTCTTCCCTTCCTCTCTCTACAGCTACCCAAGAACATCTTCTCTCTCTAAGATAGCTATATTTCAAATCAAATATTAGATTTGATCCACGATAATTGATCCACATTATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGGAGATGAGGATAAGGATGAGGATAGCAAGGTGAAAGGGAAAGATAAGGGCAAAACTATTGTGGACAACGGGAAGGGCAAATCTGTTGTGGATGCTGGTGAAGTTAAAGCAATGGAAGTTGATGAAAATGCTGGTGACATGATGATTGTGGTTTATAGGGAAAGGTCACCTTTGAGGGAGAACTCACCTATGAGGGAGAACTCACCTTCTAGGGATACCTCACCCATAAGCACTGTCCTGCCTTCTGGCAGTGAGGATGATAGTGATTATGTAGGAGGAGGTGATTGCCCTTCTGAGGATGATGAAGAGGCTAGGGAGATAGAAAGACACTACAAAGAGTTAAAGAGGAAGATGAGAGCTGGAAAGGTTCATGAGCTGGATGAGGTGGTGTTTGAGGGGTTTAAAAGTCAGTCAGTTAGGGATGGTGCATCTCCAGAAGATGGCAATGACACCCCATATGCAGATAGTGATGATGATGAGTCTTATGATGAGGTTGCTAGTGATGGTGAGCTTGTCAGAAGGAAGAGCAAGTTCCCAAGGTTTAAGAAGCAGCCAGGGGTTCCTGTTTTTGAGTTAGGAATGAAGTTCAGCTCTAAGAATCAGTTCAAGAAGACCATTATAAAATATGCCCTGGATGAAAGGAAAGTGATTAATTTTATTAAAAATGATCACAAGAGGGTAAGGGCAAAGTGTGATTGGGCTAGCTGTCCTTGAGTGTGTTTGCTGTCCAAGACTACAATAAGTGATAGTTGGCAGATTGCCACTTATGATAGTATGCATGCATGCCCACCAAGGAGGGACAATAGACATGTTTCATCTGTTTGGATAGCAAAAAAATATGGCAAGTTCATTGCTGCTAACAAGGGCGAATCTACCGTTGGGGCTTCAGCCCCAGCTCCGTCCAATGATTCCCATGTACATCTCTTCAGCAGCGCTATCAATGTACGCAGTCGGAGGAGGAAGACGATCTGTTGGTGTTTGGGTTCTGGCGGCTTAATGGGCCATGCTACTTTGTTGGCCTGTATAGGAGGGTTAGCCACATAATTGAGGAAAGTTGCGGTGGGGCGGCGACGGAAGAATATGCGAGCAGAGCAGCCGGCCGCGACGAGACAATTACATATACCGATATACGAAAGAAGGGCATCGACTGGCAGCCGCACGGCAGGGAGCCGCATGCAATGGCGTTAGATCAGAGACACAACTTCATTGATGTGAGCCTTCCTGTAGATTTTAGCGGTGACCCCTCTGACTCTTTTCTCTTCTCCTATTTGAATCATTTCTGTTTGATCACCAATCATTATGTGATTTCCCAATTAGTGAACGTAGATATACCAGTTAAAGTTGTATTTTCCATGATATGGTCCAAAAACCTAAAGGATGATTGGTAATTTGGTAATTCCAGTTGGGTTAATTTTGATGGTTTTCACATGTTCATTGAGCTCCAAAAGAAGTTTCAATCTATAATATGGTTAGGTAGCTTATTAATTTAAATTAGACTAGCAATTTACAAGAATATGTTTATTTTCATGTTGTTTGGCCTTTTAGAACAATTTATATAGAGCACCACGTTATTTTTCGTTCTAGATTCGCCACTGGTTGCTAACCCTGGATGGCCACTATCCCATATGAAAGCAACAGTTCAAGAAGAGATGTTTACTGATGCTTCAATTTCCAAGCTTAAGAGGGCCAAAAGACTTGTGATACAGAAGGCCTTTGATGTGACTAAGGGCCAGTACCATAAGCTTTACAATTACCAGCAAGAACTGCTTAGGACCAACCCTGGTAGCACTGTGGTGATCAACAGAGTGATAGGGATTGAACCACCTGTGTTCAAAAGAATTTACATTTGCCTTGATGGATGCAAGCAAGGGTTTATGGCTGGTTGCAAGAAGGTAATAGGGCTTGATGGTTGCTTTTTCAAGGGATCTACAAATGGAGAGCTATTATGTGCTATAGGAAGGGATGCCAATAATCAGATGTACCCAATAGCTTGGGCATTGGTTTATAAAGAAAACAATGAAGAAAGGGATTGGTTTTGTGACTTGCTGTGCAGTGATCTAAAGGATGGTGATGGAGGTGGATGGGTATTCATCTCTGACCAGCAGAAGGTAATGCTTCTAATCCACCATTTGTATACTTTCTGTCATTTCTGTCATTACCCAATGCATATCTAATGTCTTGTGCATGTTATGTCAATGGTAGGGAATAATTAATGCTATCTCTAAGTGGGCTCTTGAAGCTAAACACAGGAACTATGCCAGGCATATCTATGCCAATTGGAAGAGGCACTTTAATGACAAAGAGTTTCAAAGAAAGTTCTGGAAGTGTGACAAAGCATCATGCATAATGCTTTTCAACTTGGCTAGAGCAAAGCTGGCCCAACTGACCCCTGCTAGAGCTCAAGCAATATTGAACACACACCTAGAGCATTGGAGTAGGGTCTGGTTCAGGTTAGGATCCAATTGTGATTCAGTTGACACTACAACAAAATGGTTGTTTAAAGACGTTTCTCTTTAGACGTTTATAAATGTGTCTCAATTTTTGGAGCCACAAGATGCTCTGAAGACGTTTTGAAGAAACGCCACAAAATAACTTATCTAAAGACGTTTTTTGACGTCTTAATAAGGTGCCAATGCTGAGACACAACCTTCTTGTGGCCCAATGAACAAAAGCCCACTAGTGGCTCAACAGCCCACCCAATTTCCCCTTCAGATTTATAACCCTAACTCCTGGTAGACTCGATGCAGCACATGGGACGGTGGCCGTGCGCGTGCAGTTAGATGCGGCGGCGGTGGCGGCAGTGGGACAACAGCCGTGACCCGTGAGGGTCTGATCCGGCGAAGGCTCGGTCCGGCGAGGGCTGCGGCGACGGGGACGAACTACTATATGGGCCTGGCACAGCCGCTGCGGCGCGGCTGACGGCTGGATGTGGCTGGTGCCGCAACTGCTCTGATGCAGGCGATGGGCGGTGCGATCTGGATGCGGCGACGCCAGACACACGAGCTCCATGATGCAGCGCACTGGCAGCAACTGCATAGATCTGTGATACACCGGCAGCCTGCGCAGGTGAGTATTATTAAGTTATGCTACTGCTGTAGGGTTGGGATTCATGTCTGATTGTTACTCGATTAATTTATGGCTGCTAGTTCTCAGTTATGTTAATATATGTTCTACATTCTAAACAGGAATTTGATCATGTCATGGTTTGATAAATTTCGATGGCTGATGCCACCAACAATTAAGGTTGAGGAAATCTGCCGATAGAATGGATGCTTAAAAGTTAAAACGTCAAGGTATGACCATCTTGACTTTACTGTTGTTTGCCTTTTGATTATCTTACAAGGTTAAATATTATGGTGTAATGTAATGCATTCTTAGTTCAGAAAAAAAAAGTTGGAAGTGCTTGTTCACTCAGAACATTTTCGAAGCAAGTTTTTCAAATGTGTCCAATCCTTACATTTGAACTTTTTCTGTCCATAGGCAAAACTGTAGGAATTCCTAAAACTTCAAATTGTACTGCTCAGAAACCTTACTTGGAAAATAACCCCAAGATGTCAAGCAGTGTTGTTCAACAATGTTCATTGCTGCTTTTAATTACTTTGGACATAATCTGACTTGTCGTGTGAATTAATTGTATCAGATAGCTATCTAAATCAAGTAATGTAGCTGGATGAGTAGGACATTTTTTTAGCATGTGCATATTAATTATTAACCTTTTTCAGAGGTCTTATAAAAGCTTGTTGCAGGACAGTGATAGATTTTATGGAGTATTGGCAAATCTACAGCATGACTTGAAGTTGGAGAGATGATGCACCAATATCTGCGTGGAAACTTAGCAGATGTATTCCAATTAGTCAAGAAAATACCTTCTGAGAATTTGTAGCATGTCCAGTGCATTTGCACTTTAATTTTGATGTACTATTCAATTGTAAACTATTGGTTATAAATAATATTATTGACAATTTTCAATTGCTACGTTATTTTCTTTTTTATGTCCAATATAATTCTAGAAAAAATGACAACTTTGTATGTTTATCTAAGATATATAAAGTATTTGATAATAATGTTATAATGTTACGTGAAGTGCACTAAAAGTGCTTTTAGCATAATAGAGACGAAGTAAAGCATGTCTCTAATGATGTAGGGATGATATTTGAAGCGTCTCAACGGGTGTCTCATTTCTGGTTTAGACGCTTAAAGCGTCTCTATGGTTTTGAGACGGTACAAACGAAGACGTTGCTATGACGCTTTTCGAAGGTGTCTCTGTAATTGTGTGGAGACGATCTAAAACGTCTCTATTGCATAAATAAAGTGTCTCCCCCAGGCTGTTTTGTTGTAGTGTGATAACATGATTTGTGAATCTTTCAACAAATGGATTCTTGAGGCTAGATTCTTTCCTATCATAACAATGCTTGAAACCATTAGAAGGAAAGTAATGGTTAGGATTCATGACCAAAGAAAATGTTCTGATAGATGGAGCACTGCCATTTGCCCTGCTATACTCAAAAAACTTAATGTGTACATTGCTGAATCTGCATTCTGCCATGCTATATGCAATGGGGCTGACAGTTTTGAAGTCAAGCATAATGAGCATAGGTTCACAGTTAACCTAGATAAGAAGGAGTGTTCATGTAGGTATTGGCAATTGTCAGGTTTTCCATGTCCTCATGCAATTGCTTGTATCTACTATAGGACCAGCACACTAGATGAGTGGGTTGCTCCATGCTATTCAGTGGCATCTTTCAAAAAAACCTATGCCCATTGCCTGTAGCCAGTAGAGGGCATGACTAGTTGGCCAGATGATCCTAGAGAGCCCCTCAATGCCCCAGGATACATAAAGATGCCAGTGAGGCCTAAGACTGAAAGGAGAAGGGAGCCTAATGAGCCAGCTAAACCTACCAAAGCATCCAAATTTGGCACAATTATGAGGTGCAGATCATGCAAACAACCTGGTCATAACAGCAAGGGCTGTCACAAGCACAGTGGGGCAGGTGGTAGCACATCTGCAGCTGCAAATAACAACTTAGTGTTGTCAAACACACTTGGCAGCATTGCACAAAGCAGGAAAAGGAAGGCAGCTGAGCTCAGTACTAGCACATCTGCTTGCTACACTAGGAAGAGAACATCTCCTAGAAAAAAGGTATGTCAGCCAGTCCTCCTTCAATTAAACTTGTCAAATTAACATTCATTTGCCAACAACACTTGTTTCTTTTCCTTCCAGGCAGCAAACAAAAGCAGTTCACTTGTGAAGGTTGCAGCCAATGCTAGGGTGACAACTGAAAAAGGTGGTTCAACCAGTGTGAACCTTCCGGCCATAGTGCCACACTCTCAGTGTTCTTCTGCTTCAGTGAGGATCACTTCTGGGAAAGCAAGTGTTTATGTGCAAGCTCAAGAACTAGCCACTACCAAGCCCAAGAAAACACCTGCAGGTCCACTGATGCTGATTCCCCCATGGGAAACTAACAAGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012821