Os07g0525500

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0525500| Description = Similar to Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase)| Version = NM_001066363.1 GI:115472458 Gene...")
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Gene Name

Os07g0525500

Description

Similar to Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase)

Version

NM_001066363.1 GI:115472458 GeneID:4343430

Length

1379 bp

Definition

Oryza sativa Japonica Group Os07g0525500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21080296..21081674

Sequence Coding Region

21080296..21081299,21081482..21081674

Expression

GEO Profiles:Os07g0525500

Genome Context

<gbrowseImage1> name=NC_008400:21080296..21081674 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21080296..21081674 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaccaccagccatgtcaccgtccacgacatccgtcgtgcgcagcgtgcagacaccaccgccgccgtgctggccatcggcaccgcgaacccggtcacctgcatctcccaagccgactaccccgactactacttccgtatcaccaacacagagcacctcactgacctcaaacgcaaactcaacaacctatgccaggcatcaggcgccgacaagcgtttcttccaccacaacgaggagatgattgccgcgcacccggagttcctcgaccgcgccacgccgtcgctggacgcccggctggacatcgccgccgccgcggggccggagctcgcggcgcaggcggcggagagggccatcgtccggtggggccgccccgcggccgacatcacccacctcgtcgtggccaccaacgcgggcgcgcaggccccgggcgcggaccaccgcctcgcctcgctcctcggcctccgccccaccgtgcgccgcaccatgctccacctcagcggctgctccgcgggcgccgccgcgctgcgcctcgccaaggacctcgccgagaacagccgcggcgcgcgcgtcctcgtcgcctgcgtcgagctcaacgtcgtcgcgttccatggcctcaaggaggactacccccagacgctcacctgccagggactgttcggcgacggcgccggcgcggtcatcgtcggcgccgatgccgtgcgccccgtcgagcgcccgctcttcgagatggtcgccgtgtcgcaggccgtgatcccgggaacggagcacgccctcaacatgcggctcacggagcacggcctcgacggccacgtctccatcaaggacctcatacctctagcggcggccaacgccgacgagctcctgtccgacgcgttccggcagctcggcctcgccggcgtcgaatggaacgatctcttctgggtggtgcaccctggagccccgtcgatcttggaccaaatcgagagcgctctccggctggagcccgggaagctggcggcgagccggaaggtgctaagggagtacggcaacatgctgggcagcacgctgatcttcgtgctcgacgagcagcggcggcggatggaggaggaagaaggcggtcgatcagctgagtggggggtgatgatggggtttggacctggtttcaccattgagaccatggtgttgcacttgcctgaatgccctaaagaacagtaa</cdnaseq>

Protein Sequence

<aaseq>MATTSHVTVHDIRRAQRADTTAAVLAIGTANPVTCISQADYPDY YFRITNTEHLTDLKRKLNNLCQASGADKRFFHHNEEMIAAHPEFLDRATPSLDARLDI AAAAGPELAAQAAERAIVRWGRPAADITHLVVATNAGAQAPGADHRLASLLGLRPTVR RTMLHLSGCSAGAAALRLAKDLAENSRGARVLVACVELNVVAFHGLKEDYPQTLTCQG LFGDGAGAVIVGADAVRPVERPLFEMVAVSQAVIPGTEHALNMRLTEHGLDGHVSIKD LIPLAAANADELLSDAFRQLGLAGVEWNDLFWVVHPGAPSILDQIESALRLEPGKLAA SRKVLREYGNMLGSTLIFVLDEQRRRMEEEEGGRSAEWGVMMGFGPGFTIETMVLHLP ECPKEQ</aaseq>

Gene Sequence

<dnaseqindica>376..1379#1..193#atggcaaccaccagccatgtcaccgtccacgacatccgtcgtgcgcagcgtgcagacaccaccgccgccgtgctggccatcggcaccgcgaacccggtcacctgcatctcccaagccgactaccccgactactacttccgtatcaccaacacagagcacctcactgacctcaaacgcaaactcaacaacctatgtaagatgcgtacatatatattaactcaattattccagataacaaaagtaacgatgataattattaaattaacgtctcatctaccataagggcttaaacatcacatgatatactaggatctagctaagtgtcatctttgattattgtgtttttgtttcattttgcttcgtatggttgatcaggccaggcatcaggcgccgacaagcgtttcttccaccacaacgaggagatgattgccgcgcacccggagttcctcgaccgcgccacgccgtcgctggacgcccggctggacatcgccgccgccgcggggccggagctcgcggcgcaggcggcggagagggccatcgtccggtggggccgccccgcggccgacatcacccacctcgtcgtggccaccaacgcgggcgcgcaggccccgggcgcggaccaccgcctcgcctcgctcctcggcctccgccccaccgtgcgccgcaccatgctccacctcagcggctgctccgcgggcgccgccgcgctgcgcctcgccaaggacctcgccgagaacagccgcggcgcgcgcgtcctcgtcgcctgcgtcgagctcaacgtcgtcgcgttccatggcctcaaggaggactacccccagacgctcacctgccagggactgttcggcgacggcgccggcgcggtcatcgtcggcgccgatgccgtgcgccccgtcgagcgcccgctcttcgagatggtcgccgtgtcgcaggccgtgatcccgggaacggagcacgccctcaacatgcggctcacggagcacggcctcgacggccacgtctccatcaaggacctcatacctctagcggcggccaacgccgacgagctcctgtccgacgcgttccggcagctcggcctcgccggcgtcgaatggaacgatctcttctgggtggtgcaccctggagccccgtcgatcttggaccaaatcgagagcgctctccggctggagcccgggaagctggcggcgagccggaaggtgctaagggagtacggcaacatgctgggcagcacgctgatcttcgtgctcgacgagcagcggcggcggatggaggaggaagaaggcggtcgatcagctgagtggggggtgatgatggggtttggacctggtttcaccattgagaccatggtgttgcacttgcctgaatgccctaaagaacagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0525500, RefSeq:Os07g0525500