Os09g0468300

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0468300| Description = Zinc finger, RING-type domain containing protein| Version = NM_001188948.1 GI:297727026 GeneID:9269620| Length = 158...")
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Gene Name

Os09g0468300

Description

Zinc finger, RING-type domain containing protein

Version

NM_001188948.1 GI:297727026 GeneID:9269620

Length

1585 bp

Definition

Oryza sativa Japonica Group Os09g0468300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18444151..18445735

Sequence Coding Region

18444520..18445698

Expression

GEO Profiles:Os09g0468300

Genome Context

<gbrowseImage1> name=NC_008402:18444151..18445735 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18444151..18445735 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccagctcgagtccacagcaatggccgcctcctcatgcttctcctcctgctcgccgtcgccggctttgcggcggcgcagccgagccaggacaatcctccggcgggctactacgcgaccaacttcagcccgtccatggccatcgtcatcgtcgtcctcatcgccgccttcttcttcctcggcttcttctccatctacgtccgccactgctacggcggccgcggcgactactcgaccaccccgctgccccggtccggcgccgcgcggtcgcggcggcagcgcgggctcgaccagtccgtgctcgcgacgttcccgaccatggcgtacgccgacgtgaaggcgcacaagtccgtcaagggcgcgctcgagtgcgccgtctgcatcagcgagttcgacgacgacgagacgctgcggctgctgcccaagtgctcccacgtcttccaccaggactgcatcgacacgtggctcgcgtcgcacgccacctgcccggtctgccgcgccaacctcgtcgacggcgcgtccgagccggcgagcgatgtcgccgccgagctaccgacggcgcccgctccgcgcccggaaggcgcgacgccgtccgaggcagcagcgccagggggggaggcgccggcggcggcggcggcggcggcggtggtgatcgacgtggaggagaccgaggaagagaggatcataagagaggaggcggccgagctaacgcgcatcggcagcctgaagcgcgcgctgcgctcgaagtccggccgcgcgcccgccgcgcgtttcccgcgctcgcattcgacggggcactcgctctcctcctccgccgcggcgagcgccggcgccgagaggttcacgctgcggctgcccgagcacgtgctccgggaggtcatcgcggcggggcagctccagcgaacgacgagcctcgtggcgttccgcgccggccgccaggggagcacgcgccgtggcctcaggtcgggaggcggcggcggcggcggtgaaggcagcagccgcgccgggagaagcgtccggctcggccagtctggacggtggccgtcgttcctgccgcggacgttctcggcgaggctgccggcgtggggatcaaggtcgacgcggaggggcgacggcgacgggtccagcaagggcggcaggactgccggctccggcgccggcgccggcggcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAPARVHSNGRLLMLLLLLAVAGFAAAQPSQDNPPAGYYATNFS PSMAIVIVVLIAAFFFLGFFSIYVRHCYGGRGDYSTTPLPRSGAARSRRQRGLDQSVL ATFPTMAYADVKAHKSVKGALECAVCISEFDDDETLRLLPKCSHVFHQDCIDTWLASH ATCPVCRANLVDGASEPASDVAAELPTAPAPRPEGATPSEAAAPGGEAPAAAAAAAVV IDVEETEEERIIREEAAELTRIGSLKRALRSKSGRAPAARFPRSHSTGHSLSSSAAAS AGAERFTLRLPEHVLREVIAAGQLQRTTSLVAFRAGRQGSTRRGLRSGGGGGGGEGSS RAGRSVRLGQSGRWPSFLPRTFSARLPAWGSRSTRRGDGDGSSKGGRTAGSGAGAGGK </aaseq>

Gene Sequence

<dnaseqindica>38..1216#atatcccgatcgctgctactactaagcacagtgatccatggcgccagctcgagtccacagcaatggccgcctcctcatgcttctcctcctgctcgccgtcgccggctttgcggcggcgcagccgagccaggacaatcctccggcgggctactacgcgaccaacttcagcccgtccatggccatcgtcatcgtcgtcctcatcgccgccttcttcttcctcggcttcttctccatctacgtccgccactgctacggcggccgcggcgactactcgaccaccccgctgccccggtccggcgccgcgcggtcgcggcggcagcgcgggctcgaccagtccgtgctcgcgacgttcccgaccatggcgtacgccgacgtgaaggcgcacaagtccgtcaagggcgcgctcgagtgcgccgtctgcatcagcgagttcgacgacgacgagacgctgcggctgctgcccaagtgctcccacgtcttccaccaggactgcatcgacacgtggctcgcgtcgcacgccacctgcccggtctgccgcgccaacctcgtcgacggcgcgtccgagccggcgagcgatgtcgccgccgagctaccgacggcgcccgctccgcgcccggaaggcgcgacgccgtccgaggcagcagcgccagggggggaggcgccggcggcggcggcggcggcggcggtggtgatcgacgtggaggagaccgaggaagagaggatcataagagaggaggcggccgagctaacgcgcatcggcagcctgaagcgcgcgctgcgctcgaagtccggccgcgcgcccgccgcgcgtttcccgcgctcgcattcgacggggcactcgctctcctcctccgccgcggcgagcgccggcgccgagaggttcacgctgcggctgcccgagcacgtgctccgggaggtcatcgcggcggggcagctccagcgaacgacgagcctcgtggcgttccgcgccggccgccaggggagcacgcgccgtggcctcaggtcgggaggcggcggcggcggcggtgaaggcagcagccgcgccgggagaagcgtccggctcggccagtctggacggtggccgtcgttcctgccgcggacgttctcggcgaggctgccggcgtggggatcaaggtcgacgcggaggggcgacggcgacgggtccagcaagggcggcaggactgccggctccggcgccggcgccggcggcaagtaagtggtgtgcgacgaccaggcgtgcgtggttgggcaacgtgtttgatgtggcttcgcttcgccattgggggtcaaatcggaggctgcgaagaaactgttgttgctttcgtcgccgtgacacgatttttttctcttctttttcttggtggaattttggagggaacgatggttcttcgttttttcttccccttgatgattgttcattcatttttcttttcttcaaacaagcatgtacatatataccgtacagtggttgatagcaggaggaatttacgacccaaatttatctccttcattcatataagtgtgtaactagccatgatgcaaacaaattttccacaaaaaaaaatagtacatatctatcagacga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0468300, RefSeq:Os09g0468300