Os07g0527800

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0527800| Description = Ankyrin repeat containing protein| Version = NM_001066370.2 GI:297607352 GeneID:4343437| Length = 6339 bp| Definiti...")
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Gene Name

Os07g0527800

Description

Ankyrin repeat containing protein

Version

NM_001066370.2 GI:297607352 GeneID:4343437

Length

6339 bp

Definition

Oryza sativa Japonica Group Os07g0527800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21275925..21282263

Sequence Coding Region

21275925..21276660,21278025..21278563,21278704..21279391,21280513..21280709,21281934..21281989
,21282191..21282263

Expression

GEO Profiles:Os07g0527800

Genome Context

<gbrowseImage1> name=NC_008400:21275925..21282263 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21275925..21282263 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcgccggcggcggagacctcgccgccgtccaccccctccaccgcatcttgccccaccccgcggccggatgcggcggcggcggcgccgagcatgagcccctcgctgctccgcgccgcgcgcagcggcgacgagcgccggttcgtgaaggcgctcctcgccgacccggccgccccggacctcgacgccgtcgccaccgcgggggggaacacgctcctccacgtggccgcgtggggggggcaccccgcgctcgcgtcgctcctcctccgccgcgccccgggcctcctcgccgcgcggaacgcggcgctcgacaccccgctccacctcgccgcccgcgccggggcgcacaaggtcgtcgccctcctcgtcgccgcgttctcctcctcctcctcctcctccgccgccgcggatgcctcctccccgtccttgcgcgccctcacccgcgccaccaacaggcgcggcgagacgccgctccacgacgcggtgcggggcgggcacgaggccgcggcgcgcgcgctgaccgccgcggacccggggctcgcggggctgtgtggcggcgcgggggagtcgccgatttacatggccgcggcggccggatcccttggcatggtgcgccttctcacaaagacttacaggaacgacgaggaggaggaggaggaattgcccgtattgtgttcgtgcactggcccgggcgggcgcacggtgctgcacgctgctgtgctcacgagcaacgtaatagaaatgacacagggattgttgcagtggaacccaacacttgtgaaagaagtagatgattctggaagtactcctcttcattatgttgcatctgttggaaatattcctgcgttgaagctgttattgggatatgatacatctccggcatatgtcccagattcaaatggtttatttcctgtacatattgctgctaaaatgggatatggtcaactgatctatgaactatcaagatacttcccagattgtgatgaaatgcttgacagcaaaggaaggaacttcctacatattgctgttgagcacaagaaatggaaagttgtttggcatttctgtggaacccaagaacttgaaagaatgttgaatgtcatggattatgaagggaatacagctctgcatcttgcagtcaagaatgctgaccagatgatagtgagccttctgatggcaaataaagctgtattgccaaatatagtgaacaaccaggggctcactgccttagatcttgccgtgttggcaactgacaaaggaattagttatacactgaatccacaggtcattatacttcgctgtttggcatggacgggagctgtccttagtcctcgtcgcttggatcatttcatagatgagtttaacatcgggaaagcttctggaaatgaactaaagaaattcaccaacatttcacagaacttagtagttggttctgtgctgatctccacagtcacattcgcagcagtgttcactctgcctggcggttacatatctgatggtcatccacatgccggtgcaccgattttatggcacagatataccttcaaggcatttgtgatggcaaacacccttgcatttgtgggatccacgctgtccaccatttggctcacttatgctggttcagagcatgtccacccactgctccgggcactctacatgttcttctcagtgatttcgatggagcaggcgacgagaagcatggtggcggcattcgcactgggagcatatgttgttctgagcccggtcagcgagcggatcgcccttgtggtatgcctatccaccttcaccaccctgttgcttcgcaacccgtcgaattggcagctagggttcttgttcatgccgatcaagagacggctggggtggagaggcgcttttagagcccacctacctcaggaaacgaggagccgtctcacggttggtgttggctccaattttgcgagtttgatcttttggaggatgcttgaaatctatatgtgctcatggaggatagctgtatctcctggcactcaagctcaagtcgatcaccgtcgggcttccaccattgcttcagaccgtgcccgtcaccgtcaatgctcgagttcttccacaacctcgccgatggcaggagatgctgcagcgctccttctcgtcgtcgccgatcaaggagaagaacatgccaaaggtgtgcaggagcagctacggggcgggtcgatgcctgcagcgacgcagagctccggcaatccatctgcgtgggagggagcaatccataaagtagcactcggcgacggtgaggtgatggacgcgtcgtga</cdnaseq>

Protein Sequence

<aaseq>MASPAAETSPPSTPSTASCPTPRPDAAAAAPSMSPSLLRAARSG DERRFVKALLADPAAPDLDAVATAGGNTLLHVAAWGGHPALASLLLRRAPGLLAARNA ALDTPLHLAARAGAHKVVALLVAAFSSSSSSSAAADASSPSLRALTRATNRRGETPLH DAVRGGHEAAARALTAADPGLAGLCGGAGESPIYMAAAAGSLGMVRLLTKTYRNDEEE EEELPVLCSCTGPGGRTVLHAAVLTSNVIEMTQGLLQWNPTLVKEVDDSGSTPLHYVA SVGNIPALKLLLGYDTSPAYVPDSNGLFPVHIAAKMGYGQLIYELSRYFPDCDEMLDS KGRNFLHIAVEHKKWKVVWHFCGTQELERMLNVMDYEGNTALHLAVKNADQMIVSLLM ANKAVLPNIVNNQGLTALDLAVLATDKGISYTLNPQVIILRCLAWTGAVLSPRRLDHF IDEFNIGKASGNELKKFTNISQNLVVGSVLISTVTFAAVFTLPGGYISDGHPHAGAPI LWHRYTFKAFVMANTLAFVGSTLSTIWLTYAGSEHVHPLLRALYMFFSVISMEQATRS MVAAFALGAYVVLSPVSERIALVVCLSTFTTLLLRNPSNWQLGFLFMPIKRRLGWRGA FRAHLPQETRSRLTVGVGSNFASLIFWRMLEIYMCSWRIAVSPGTQAQVDHRRASTIA SDRARHRQCSSSSTTSPMAGDAAALLLVVADQGEEHAKGVQEQLRGGSMPAATQSSGN PSAWEGAIHKVALGDGEVMDAS</aaseq>

Gene Sequence

<dnaseqindica>1..736#2101..2639#2780..3467#4589..4785#6010..6065#6267..6339#atggcatcgccggcggcggagacctcgccgccgtccaccccctccaccgcatcttgccccaccccgcggccggatgcggcggcggcggcgccgagcatgagcccctcgctgctccgcgccgcgcgcagcggcgacgagcgccggttcgtgaaggcgctcctcgccgacccggccgccccggacctcgacgccgtcgccaccgcgggggggaacacgctcctccacgtggccgcgtggggggggcaccccgcgctcgcgtcgctcctcctccgccgcgccccgggcctcctcgccgcgcggaacgcggcgctcgacaccccgctccacctcgccgcccgcgccggggcgcacaaggtcgtcgccctcctcgtcgccgcgttctcctcctcctcctcctcctccgccgccgcggatgcctcctccccgtccttgcgcgccctcacccgcgccaccaacaggcgcggcgagacgccgctccacgacgcggtgcggggcgggcacgaggccgcggcgcgcgcgctgaccgccgcggacccggggctcgcggggctgtgtggcggcgcgggggagtcgccgatttacatggccgcggcggccggatcccttggcatggtgcgccttctcacaaagacttacaggaacgacgaggaggaggaggaggaattgcccgtattgtgttcgtgcactggcccgggcgggcgcacggtgctgcacgctgctgtgctcacgagcaacggtgagtttctcctatcctttcctgacgaatgttcagttaaaattcaagatttatttatgtttgttcgtgcctgagtgtgacgaactagtgagcagtgtttcaatttcaactctagattgatagatcttgttggttattgttaatggagggcctctgcaacaatcttttgttaaatcagaatttctttggatataattaactgttttgtatgtaaatttagtagctaggggatcgtagcttttaaggcaagtggatgcagtatgattgaggtgtctgtttcgtgtgatattttacatccatgtgattctgctttgaaattaatgcgaactagtttgtcatctttagaccagattgttgattagtaccttgttgtgacatcctgatagcgattttgggttccggggtctgcttaacaaggagaaagttggtggggcttaacatgatggatttatggtagtggagtaagaggaggtggctcttagtgtttgtgaatttagagggttgcagaaatgattcattatgttggtggaattttggtggatactcatcacatggccaggatagcctgctttatactgcatttggaccatgaagcaaaaagaaaaatagggatatgtgtgaaaaggatcttatattcttattcgtattcttattgaaaagtatttgcaaggatggggcaatgtatgctaaatatattggttacaaaaatgactgatggggattggcatgagctatgaacatgatgtaaagaatggccctgcaataaaaatgatgtaaagcatggaacttgaccaaagcagatgttgttctattaaaattactctgaatatatgatatattggaagcattttgcaacatacaattcaaattcaaagttgacccctaacatagatgatcaaatctcattggttaccttgaaatatttgtatgtcctatcttgtaatagtctgcgcatactatttgaatgaatccaactggaatacagcaaagaaaccaagtagaaggatcatttatcttgtgattatcaaaattctgctcagctttgaatttgacatgacaataagttttgtcaatcttgaaccttcttaccatctctcatttctgtgagaaactgatctgatctgttacatttcctttggttgtttctacgtacaaaaaatcattactttatttggactgtgattcatatgtgtttgttcatgtgagtgagtaactaagtatgtattaaagaaatatgtttcctttttctacgagacaactgggggtacatttatcctatcactagtaaatcttagaacaagaaaatttgtagctataatataaatatacattcgtgttgtccacacatttactaaattctttagtaatagaaatgacacagggattgttgcagtggaacccaacacttgtgaaagaagtagatgattctggaagtactcctcttcattatgttgcatctgttggaaatattcctgcgttgaagctgttattgggatatgatacatctccggcatatgtcccagattcaaatggtttatttcctgtacatattgctgctaaaatgggatatggtcaactgatctatgaactatcaagatacttcccagattgtgatgaaatgcttgacagcaaaggaaggaacttcctacatattgctgttgagcacaagaaatggaaagttgtttggcatttctgtggaacccaagaacttgaaagaatgttgaatgtcatggattatgaagggaatacagctctgcatcttgcagtcaagaatgctgaccagatgatagtgagccttctgatggcaaataaagctgtattgccaaatatagtgaacaaccaggggctcactgccttagatcttgccgtgttggcaactgacaaaggaattagttatacactggtaaacttcttcaccttgccgcctctgctgtttgcacattgtagttcatatactttttcatcatttggattcaaagtctttagcttaaatttttagctcgcatcctttgccttctctgaattgttgatttcttatgatagaatccacaggtcattatacttcgctgtttggcatggacgggagctgtccttagtcctcgtcgcttggatcatttcatagatgagtttaacatcgggaaagcttctggaaatgaactaaagaaattcaccaacatttcacagaacttagtagttggttctgtgctgatctccacagtcacattcgcagcagtgttcactctgcctggcggttacatatctgatggtcatccacatgccggtgcaccgattttatggcacagatataccttcaaggcatttgtgatggcaaacacccttgcatttgtgggatccacgctgtccaccatttggctcacttatgctggttcagagcatgtccacccactgctccgggcactctacatgttcttctcagtgatttcgatggagcaggcgacgagaagcatggtggcggcattcgcactgggagcatatgttgttctgagcccggtcagcgagcggatcgcccttgtggtatgcctatccaccttcaccaccctgttgcttcgcaacccgtcgaattggcagctagggttcttgttcatgccgatcaagagacggctggggtggagaggcgcttttagagcccacctacctcaggaaacgaggagccgtctcacggttggtgttggctccaattttgcgagtttgatcttttggaggatgcttggtatgctatctacatacagttttatctttctgttagcattgctatgagctgcaatgtatgtggtgcccctggtgtaacaaatcacagaagttcaaagagttgcatgttgtgtacaggagtgtgtcgtgttgcttgtaattcgatcgtcgtgcgtcttctctttctctggctccaaggctcccagccatatgcaggcagcaggctgcagcatgcatgctccgggctgacgggttgaattggtttgtcagttttttgagatatagaggttggattggttcgtcagtcttttagatatagagggtgggttggattggttcgtatgtttttattaagttatagagctataattcagatctagaggtaatattctttttcaagggtcattttatctcacgtgtctatcgaccaatcaccatgaaaaatacagtaggtatgtcccaatctgatcatctgtttctccaaccaaacacatgctgtgcaatgggagcttgccatggtaagcgggctggcccaatcatccagccctgcaggcccattggcccagcaattgtactgacaagcgcctacggcgaccgtgtctctgcgagagcaccgcggcggcgcggatggcagaagggtcggggcgggtcgtatgtgtcgtacggcggcccatcacgacaaaccgatcgagtacctgacaggctgacactccactggccgtgcatcatacagggctagatatttatgtacataatttttgcgaggaataaaatatttcctcccttttatattttaaatcgttttagcttttttcctaacaaaactttttaagatttggttaagtttatagaaaaaattagcaatatctactatataaaattaacttcattaaatgtaacattggatatattttgagagtatgtttcttttgtttgaaaatgctactgtatttttttataaatttaatcttttgtttgaaaatgctactgtatttttttataaatttaattaaatttaaataagtttgattggaaaaagttaaaaccacttgtaatatgaaacggaggtagtacaactgaaagagtagaagagtacacgttttaatttcaacaaaagctataacttgagcaccaccgtggcagaaatctatatgtgctcatggaggatagctgtatctcctggcactcaagctcaagtcgatcaccgtcgggcttccaccattgcttcagaccgtgcccgtcaccgtcaatgctcgagttcttccacaacctcgccgatggcaggagatgctgcagcgctccttctcgtcgtcgccgatcaaggagaagaacatgccaaagtacgacagcatctcattgtcgtcatctgcacctttctcgaagtagtcgatgtagcttttgcagatgatgtccccctcgtgcacgtacagctctggcgccccgccgcccacgacgtcttgaacagtttctccatctgctccgtatgagggcatgcttagttcgcaaaaagaacatttttaggtgtcatatcggatgtttgatcggatgtcagaagggattttcggacacgaatgaaaagatttcataactcgcttggaaaccgcgagacgaatcttttgagcctaattaatccgtcagtagcacatgtgggttactgtagcacttatggctaatcacgccggctcgccttcgccaccgccgattggtgattttgtctccacggctggtggattctgccaccattaccgggtgtcttcgtcttcaccgccgaccgcctttgcagccgccgactggtgctttcgcctccacggctagtggactccgccgccgttgtcaggcgtcttctttttcaccaccggccacttttgccgccgccggctggtggttttgcctatatagatggtggactccgtcatcgttgatggacatttttatcttcacagccggccgcctcagttgcgtccatggttgatgtttttgttgctattgatggacgaccttctccccacatcggctacctctgccgtcattgatgggaatattacaaagctaaatcattattaattttcttctttatatgatatttttattttactctgcctcactacatcaattggttctccattgagtagtgagtcgtgggttatatcatattttttcaacaattttcatagtatttatcttgattgcttgcgaaataatccaagtaaaaaaagtatcgatcgagttatggagctcaatttccctattcttttcgtttagtttgtcgatggatagttgcctttgggccgattcaaaccacgtggggacttgttggatggagtgtataatgcaaggttttaagtattactcgcaagaaatcaaaagcagagagataattgtgaagacgatgaagtctatcaacgacgatgtaatagaccagctgtgtagacgaggacaccaagagattaatctcgtgaccttctagaaactgaacgagattgaagtgatctttgagcgtagtcctgtaggagaacacattcgttgacagccttgatcaacttcatcttgccgttggcctgcagggtgtgcaggagcagctacggggcgggtcgatgcctgcagcgacgcagagctccgggtgcgtttgcagcaacatctcggcttttcggcacaatatatacatgcaaacaaatataatcgtgattgggttagcatataaaataatgcatggatgtgttgttgattatgggaacaggtaagcaagttaatttgtttgctccctccatgtcttgcatgctcccctgtacacacattggtcgaccatggtttcaatcaacagcaatccatctgcgtgggagggagcaatccataaagtagcactcggcgacggtgaggtgatggacgcgtcgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0527800, RefSeq:Os07g0527800