BGIOSGA013131

From RiceWiki
Revision as of 15:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013131

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013131, complete gene.

LocusTag

OsI_12631

Ensembl Transcript ID

BGIOSGA013131-TA

Ensembl Protein ID

BGIOSGA013131-PA

Length

3297

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27204043..27207339

Sequence Coding Region

27204043..27204099,27204207..27204272,27204360..27204471,27204663..27204791,27205220..27205291
,27205670..27205785,27205919..27205995,27206440..27206697,27206797..27207112
,27207193..27207339

Genome Context

<gbrowseImage1> name=IndicaChromosome03:27204043..27207339 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:27204043..27207339 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGGTGCTGAAGGATGATGCTGTTGAGGAGAAGGGCGAACGTGCCAGGATGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTGGTCAAGACTACATTGGGACCTAAAGGAATGGACAAGATCTTGCAATCAACAGGCAGAGGGAGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAACCCTGCTGCAAAGGTCCTTGTTGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGGACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAACATGAAAATTCATCCAATGACTATAATTGCAGGTTACAGAATGGCTGTTGAGTGTGCTAGAAACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGATAAGTTTAGATCAGATCTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTACTTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGGTAGCACAAACTTGGAAGCGATTCAAATTCTGAAGAAACCTGGAGGATCCCTCAAGGACTCCTTTTTGGATGAAGGGCAGTTGATCTATAACTTCCCTGAAGAACTTTTTGCTGATGCTGGCATACTTGCAATTGAGCATGCTGACTTTGAGGGCATTGAACGGCTAGCTCTTGTCACCGGTGGTGACATTGCATCAACTTTTGACAACCCAGAGTCTGTTAAGCTTGGGCATTGCAATGTCATTGAAGAGATTATGATTGGGGAGGACAAACTTATTCACTTCTCTGGTGTCGCGATGGGCCAGGCTTGCACCATTGTTTTAAGAGGAGCAAGTGAGCATGTGCTTGACGAGGCTGAGAGGTCCTTGCACGATGCCTTATGTGTGCTTTCCCAGACAGTAAATGACACCCGTGTCTTATTTGGGGGTGGTTGGCCGGAGATGGTGATGGCCAAAGCTGTGGATGATCTTGCAAGGAAGACCCCTGGGAAGAAATCTCATGCTATCGATGCCTTTTCACGTGCCCTGCAAGCCATCCCAACAATCATAGCTGATAATGCTGGTCTGGACAGTGCTGAGCTGATCTCTCAGCTCCGAGCTGAGCACCACAAGGAGAATTGCACTGCTGGAATCGATGTCATCACAGGCAGCGTTGGAGACATGCAAAAGCGAGGCATATCGGAGGCCTTCAAGGTGAAGCAAGCCATCCTTCTCTCCGCCACCGAGGCGGCTGAGATGATTCTCAGGGTTGATGAGATCATAACTTGTGCCCCACGCAGGAGAGAGGATAGGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MERVLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVLRLKGSTNLEAIQILKKPGGSLKDSFLDEGQLIYNFPEELFADAGILAIEHADFEGIERLALVTGGDIASTFDNPESVKLGHCNVIEEIMIGEDKLIHFSGVAMGQACTIVLRGASEHVLDEAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSRALQAIPTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVGDMQKRGISEAFKVKQAILLSATEAAEMILRVDEIITCAPRRREDRM</aaseq>

Gene Sequence

<dnaseqindica>1..57#165..230#318..429#621..749#1178..1249#1628..1743#1877..1953#2398..2655#2755..3070#3151..3297#ATGGAGAGGGTGCTGAAGGATGATGCTGTTGAGGAGAAGGGCGAACGTGCCAGGATGGTGTGAAAACCCTTTCTTATCGATTTGACCTTTTTAATTGGTTTTTCTTAGTTAGTTGTATAGATCCTGCAATTTTACACAACAACCTGGTGTCTTTAAATTGGCAGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTGGTCAAGACTACATTGGGACCTAAAGGAATGGTATGCTCCTTAGTGCTAGACTGCTAGTGCTTTAAGTACATGATTCCAGTGTAGTAAATTTTTACATGTGGCAATATTTATGTTCAGGACAAGATCTTGCAATCAACAGGCAGAGGGAGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAACCCTGCTGCAAAGGTCCTTGTTGGTATCCTTTCATTTGAATCTGTTGCTTGATGATTTTTCATACTAACACAATAGCAAGTCATAGATGAAGTGGCAAAGGGGCAAGTTTCCTTTATACAGCAACATGCGTACTTATAGTTTCTCATGCTACCTCATTTGAGTATTTGATATGTATGATGTATCAAGGAAGTTAAGTCCTTAACGCATTGTTAGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGGACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAACATGAAAATTCATCCAATGACTATAATTGCAGGTAATTCTCATCGTTGGTTTAATATGCTTTCCAGGCTCACACCATATTTTGCATGATTTGTATAATATGGTATTCCTAACATATCAAACTAGGTTAACTCAATTAATTAGTCACCTCTTCAATATGTGTAAATTGGTTTGTTGAGGGTAAAATTCTCAACACGCACTAGTTCATGTACTACTATAAATCTATATTACAATTGACAATAGAAGTGCGTTGAGATTTTCGCAAGGACAATACAACAGATGGAAGATTGCTTGGTTGGTCTGAAAATTGGAAGTTAGCATTCTTAAATAGTTGGTTGAATGCAGTTTGTTCATATGCATAGGCTGAATTCAGATTTTTCACTGCACCAACAAGAAAAACCATTATGTGAATTCATGAGTACACTAACATCTCCAATGCTCCATTTCTTTGTGAAACTATAGGTTACAGAATGGCTGTTGAGTGTGCTAGAAACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGGTAACTATGTTTCTCACATATGGTTATTTAACTTGTTTTGAACTTTTTCAATGTGTTAAGAGTTGGAAGACTATCTTTCCATCATCTAGATACTCTTAAATCCTCAAAATTAAAATAAGATTGAACTGGTTCTTTCAATTTGAATTAATCCTTATTCTGATGTGGAGATACATTCCACTCAAGTTTCACAAACCTTCCTGGAGTACTAGCACACAGGGTCTGGCATCATTCAAACCTAATTTTCTTGGCTGAGCTCTGAGGATAGTTTTCAGTCCGCTGTATAAGTTCAACGAACTCCATATGCATTATTTCTTGTCTAAAGAATATGCTCACCTGAACATGTTGATCTGACTGGATAAGCTTCCTTTGGATCTGCAGATAAGTTTAGATCAGATCTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTACTTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGTATTCACAGGGTTGAGTGGAAGTTGGTGTTGAAATATCTTGTTATTGCAACTACTATATCTGGGATGCTGTCTGATGATGTTTGTGTTGTCACATGATGCTTTTCTAATGATTGATATGCACCACTGTGCAGGGTAGCACAAACTTGGAAGCGATTCAAATTCTGAAGAAACCTGGAGGATCCCTCAAGGACTCCTTTTTGGATGAAGGGTATGTTCTTCCAAAAGCTGTACTATCGGAAATATTTCAACATTTGATGTCCTTCAATAGATTAGTTTCTAATCAGTCATTAGTGTGATAGTTTGTGCCAAGTAGTTTGCCAATTAACACTGAGCAAATACGGAGTGTACTAGGAAACACTATACCCAACTGACAACCATGATTCTGATTCTGCTGTCCGTTTAACGTTTTGGTTTCTGTTTTGCAGTTTCATTCTTGACAAGAAAATGGTCTTGGACAACCAAAGAGAATTGAGAATGCCAAAATTTTAGTTGCAAACACAGCTATGGACACAGACAAAGTAAAGATATATGGGGCACGTGTCCGAGTGGATTCGATGGCTAAGGTCGCAGAAATTGAAGCTGCCGAAAAGCAGAAAATGAGAGAGAAAGTTCAGAAAATCATTGGTCATGGAATTAACTGCTTTGTCAATAGGCAGTTGATCTATAACTTCCCTGAAGAACTTTTTGCTGATGCTGGCATACTTGCAATTGAGCATGCTGACTTTGAGGGCATTGAACGGCTAGCTCTTGTCACCGGTGGTGACATTGCATCAACTTTTGACAACCCAGAGTCTGTTAAGCTTGGGCATTGCAATGTCATTGAAGAGATTATGATTGGGGAGGACAAACTTATTCACTTCTCTGGTGTCGCGATGGGCCAGGCTTGCACCATTGTTTTAAGAGGAGCAAGGTATGCCTTTATTGTTCACACGCATCCTTGTGTAGCATAATTTTGTAATTTTCATATGTTTTTATACGTACTATATTTATGTGTTTTTGTTTTCTACAGTGAGCATGTGCTTGACGAGGCTGAGAGGTCCTTGCACGATGCCTTATGTGTGCTTTCCCAGACAGTAAATGACACCCGTGTCTTATTTGGGGGTGGTTGGCCGGAGATGGTGATGGCCAAAGCTGTGGATGATCTTGCAAGGAAGACCCCTGGGAAGAAATCTCATGCTATCGATGCCTTTTCACGTGCCCTGCAAGCCATCCCAACAATCATAGCTGATAATGCTGGTCTGGACAGTGCTGAGCTGATCTCTCAGCTCCGAGCTGAGCACCACAAGGAGAATTGCACTGCTGGAATCGATGTCATCACAGGCAGCGTAAGTTGACGAATAATCAGAAGTTCTTAGTTTCTTTTGAACCTTAGACTGGGTTTGAAACTTAACATTATGATCTGCAGGTTGGAGACATGCAAAAGCGAGGCATATCGGAGGCCTTCAAGGTGAAGCAAGCCATCCTTCTCTCCGCCACCGAGGCGGCTGAGATGATTCTCAGGGTTGATGAGATCATAACTTGTGCCCCACGCAGGAGAGAGGATAGGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013131