Os07g0531700

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0531700| Description = NUC153 domain containing protein| Version = NM_001066389.1 GI:115472510 GeneID:4343456| Length = 5040 bp| Definitio...")
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Gene Name

Os07g0531700

Description

NUC153 domain containing protein

Version

NM_001066389.1 GI:115472510 GeneID:4343456

Length

5040 bp

Definition

Oryza sativa Japonica Group Os07g0531700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21473040..21478079

Sequence Coding Region

21473192..21473551,21474329..21474445,21475159..21475433,21475643..21475805,21476030..21476158
,21476726..21477450,21477590..21477818

Expression

GEO Profiles:Os07g0531700

Genome Context

<gbrowseImage1> name=NC_008400:21473040..21478079 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21473040..21478079 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacgagaggttcgcggcggcgcggaccgacccgaggttccgggcgatgcggcggaaggaggcgaaggtggagctcgactcgaggttcaccagcatgctgacggacccgaggttctcgtcgtcgtcggcgccggtggacaagcacggcaggaggcgccgcaagaagggtggcagggagaacccgatgctgcagtactatctcaaccaggaggaagaggaggaaaaggagaaggccaagttggttgaagaagaggaagaagagggggacgcagaagagcagcaaggggaagaagagagctccagtagcgacgacgacgacgacgatgaggacgaagaagaggacgatgacgacgagtactctgtcggcagtgacattgcgcattatttgatgggcaggcatgatgatacacctatgattgacaaggaaacccataggcttgctgttgttaatatggactgggatcatattaaggcagttgacctgtatatggtgatgacatcttgcctcccaaaaggtgggcgagtcttatcagtgtcagtctatccatcagaatttggacttgagcgcatgaaaattgagtcaactaagggcccagctgcccttgttgatgtcaatggtagtgatggtgaatatagtggtggtgatgatgatgacgacgatgaagaagaagaagatagtagtgacactgaacatgattctgaggctgaaaacaacaagctacgtacttatgagctaaacagactgaggtattactatgcagttgtggtgtgtgattccagtgcaactgcaaatcacctgtacatgaatcttgatggtacagaattattgaaaacatcaaatgtgttcgacttgcagtttattcctgactctatggaatttaaacatcctgctcgtgatgttgctacagaggcacctccaagttacaaggagcctaattttgaaactcgtgctttgcaacatagcaaggttaagctcacgtgggacgatgatgaaccagaacgcaaaaaggtcttgaggcgaaagttcactgatgatcagttagatgatcttgatatgtacttagcaagtgatgacagtgcatcagacgatgaaggtgcagataatcatggtgacgagtctctacaaagtggagccaaaagaaagttaacaagggaggagaggttggctcttctactacaaggtgacaaatccgaggaggaacaaactgatggcgaggacatggagataacattcaacacagagcttgaggaccttagcaagcgtatacttgacagaaaggtcaacaatgagaagactgtctgggagaagcaccaagagaaaatgaaagagaaacgtaaatctaggaagagaaggtcaaaggatgatgatgatgatggctatagcagcgaagatggcctggatgaacatgacgatttctttgatgatgaaatgtctgatgaagaaattaagccaaacaagaagcagaaggcaaaggccaaagataaaggaaaggggaaaggaaaggacaaactcccagaacaacatttggaggatgaagcaaccagagaagagttggagcttttggttgcggctgacaaggatgcaggcaacggtgcaaagggttataacttgaagcgcaaaaagggtacgaagggcaagaagggtaaagagcaatctgttgaggacgaacttcccgacatagatcttagcaaagatgagaggttctcagccatgttcaattctcattggtttgcggtggatcctactgatccccagtacaaaaggagtgcggcctttatgcgcaagcaagctgggataaagggagcacatgaaccatctctgggaggtagaggtagtggtagaggtacattgccacctgatgatgtgcctaccgatactcatgaccagaaacctgatggcacatccacggagaagctggaaacaatgtctgcagtcaagtcactaaaacggaagcttactgcattaaaaaacacaagcaagagtgaccgatag</cdnaseq>

Protein Sequence

<aaseq>MEDERFAAARTDPRFRAMRRKEAKVELDSRFTSMLTDPRFSSSS APVDKHGRRRRKKGGRENPMLQYYLNQEEEEEKEKAKLVEEEEEEGDAEEQQGEEESS SSDDDDDDEDEEEDDDDEYSVGSDIAHYLMGRHDDTPMIDKETHRLAVVNMDWDHIKA VDLYMVMTSCLPKGGRVLSVSVYPSEFGLERMKIESTKGPAALVDVNGSDGEYSGGDD DDDDEEEEDSSDTEHDSEAENNKLRTYELNRLRYYYAVVVCDSSATANHLYMNLDGTE LLKTSNVFDLQFIPDSMEFKHPARDVATEAPPSYKEPNFETRALQHSKVKLTWDDDEP ERKKVLRRKFTDDQLDDLDMYLASDDSASDDEGADNHGDESLQSGAKRKLTREERLAL LLQGDKSEEEQTDGEDMEITFNTELEDLSKRILDRKVNNEKTVWEKHQEKMKEKRKSR KRRSKDDDDDGYSSEDGLDEHDDFFDDEMSDEEIKPNKKQKAKAKDKGKGKGKDKLPE QHLEDEATREELELLVAADKDAGNGAKGYNLKRKKGTKGKKGKEQSVEDELPDIDLSK DERFSAMFNSHWFAVDPTDPQYKRSAAFMRKQAGIKGAHEPSLGGRGSGRGTLPPDDV PTDTHDQKPDGTSTEKLETMSAVKSLKRKLTALKNTSKSDR</aaseq>

Gene Sequence

<dnaseqindica>153..512#1290..1406#2120..2394#2604..2766#2991..3119#3687..4411#4551..4779#ctccccgcagcgacgcgaaggggagcaagggcaagaagcggaagcacaaggacggggagggggagaaggagcacgggaagaggtccaaggagaggaagggggagggcgaggcggcggaggcgaggcgcggggacgacaaggtgaggcgggcgatggaggacgagaggttcgcggcggcgcggaccgacccgaggttccgggcgatgcggcggaaggaggcgaaggtggagctcgactcgaggttcaccagcatgctgacggacccgaggttctcgtcgtcgtcggcgccggtggacaagcacggcaggaggcgccgcaagaagggtggcagggagaacccgatgctgcagtactatctcaaccaggaggaagaggaggaaaaggagaaggccaagttggttgaagaagaggaagaagagggggacgcagaagagcagcaaggggaagaagagagctccagtagcgacgacgacgacgacgatgaggacgaagaagaggacgatgacgacgaggtggtactttgcttacaattttttgatggtttggtttatatttcgttcaattctctcgcttgtagcatggaagtactttatttactttatacgtctcgtccattctacatattatatggtagatgatagtgattagctcctccaagaactcaattgcatatatcttgtttggagcatgatttgtaggggactacttttgagtctgagtttagttttaagagcattaagtacttcttgtttttctatcaatatatggtcttggtcatttgtaaccacggtatgttcaatctgatgttacaagtgttatgaactgttaaacttttttttttgggccgaatgtgtaggttatagagctatgtggttgtaccaagatatgcgtctttgtagctacgcatttttaatagtcgactaaccaaaaaaaacaaagggcatgtgtttgtgttgtggtatttgacacaatcccttcgaattgcttgggactcaagtgcactttgtttgtccaaatgtccaattgaagggattggacataaacccacatgtcaaagaccctactttactcatgtactcagctgacaatgacatgccactgttagtatttttatccaccatcctgccgcttaaatctattttttgagttagccttgtaatttttgtattttgtaagcattgattaatgattgcaatatttatgtagttttcgcccttcaagaaaaaaaaacaatgttttgcaacattattcttgcattatatctaatacatggtccttttttttcacagtactctgtcggcagtgacattgcgcattatttgatgggcaggcatgatgatacacctatgattgacaaggaaacccataggcttgctgttgttaatatggactgggatcatattaaggtgtgtgatgattgaaaataattatttttttgtcaagcaaacctattagcataaacaatttacagaaatattaaaaaaggctttgttactggatgcttaagaattaccttgaaaccaataattttactgaaaaaacttgtttattatgtgattacatttttttaatgcttttgcttttatgagcgcattggtagcttctatcgaacacttttgtgccattggggtgatgtttggaaaaaaattgtctgctaggtggcagcagcatttacagagtatgttttatggctgaaagatgtttatgtttatttcttatgttctgtttaaatcaggtgaaatttctatgtgtactactctcttttcttttagttgaggacctaatagtccaccatataaattcacttattttatcaaacatagttattgaggatgctagttcttgtaaacaaatgtagttgcatctaagttcttgtaaaaaaatgttgttgacagagcagtgcacactgaggcacttggcgaacacatatccaaactctaaaaatgcttggactttggaaagtttagagggcaaatccaacttagcaaaatcctggttgttaaaatgaagatctgagttgttacattgttattttgtctccttgcaactttcaattgattagttttgttcatccttcattgtacaataatactatattttgtttgcgtccttccaataggcagttgacctgtatatggtgatgacatcttgcctcccaaaaggtgggcgagtcttatcagtgtcagtctatccatcagaatttggacttgagcgcatgaaaattgagtcaactaagggcccagctgcccttgttgatgtcaatggtagtgatggtgaatatagtggtggtgatgatgatgacgacgatgaagaagaagaagatagtagtgacactgaacatgattctgaggctgaaaacaacaagctacgtacttatgagctaaacagactgaggttagtaacaaaatggagaaggatttttttttatctgtttttctgggacttgtagacagtctttaacatgttcaaatcctatgtgtaaatatatgtttttctgcttgatgtatttatcactgtctgtgtatgaggagacattctcatctattcaattttttatacaacaatgtaataccaatcttatgcgtacgcttatcttgttgtaggtattactatgcagttgtggtgtgtgattccagtgcaactgcaaatcacctgtacatgaatcttgatggtacagaattattgaaaacatcaaatgtgttcgacttgcagtttattcctgactctatggaatttaaacatcctgctcgtgatgttgctacagaggtatcttactttactacattgtatcatcagcaattttggtatataataaggttgaaacatgaaacattgaaataaaactgatccttttccttcttcaaaagtgacttgccatgttatttttccattgttcaagttaacatcttttaagtttagtataacttgcttttcaattgtgctaaaagaattacttttagtttgtcagtgatttgtttgatattatgcaggcacctccaagttacaaggagcctaattttgaaactcgtgctttgcaacatagcaaggttaagctcacgtgggacgatgatgaaccagaacgcaaaaaggtcttgaggcgaaagttcactgatgatcaggttcattcttatataaattattttgtttgtgttacgagtttatagttttttggtaggtccaataacatgataaacaattatggagtaacatgtcatgagctgggccgctggcactaaagtcaataatattttgcaattcatctccctttttatgtgaaagttctttccctgtgaacggctatgagttatactggtttgtctcgatgtttgcctatcgtgtagggatgatattttccttattcgtttttattaggcacaaattgatttggcacaatcttttaaattgaaatgtgaccatacatttctttctcaatatattgttgctatatagaaaaatcatgtccatatgtaagtacattgaaatacaaatctagcaggtaccgcctttgtatcactaaatagttatttgaatgtcctaattgttggtcaaaactaacgaagtttgaatcttaaaatttctgtgccttatgagttgaatggatatagtacctttgttgttgtgtccttgtccttttatttttgttttggtctacagttttggtaactttgttcatgtttttgctgcagttagatgatcttgatatgtacttagcaagtgatgacagtgcatcagacgatgaaggtgcagataatcatggtgacgagtctctacaaagtggagccaaaagaaagttaacaagggaggagaggttggctcttctactacaaggtgacaaatccgaggaggaacaaactgatggcgaggacatggagataacattcaacacagagcttgaggaccttagcaagcgtatacttgacagaaaggtcaacaatgagaagactgtctgggagaagcaccaagagaaaatgaaagagaaacgtaaatctaggaagagaaggtcaaaggatgatgatgatgatggctatagcagcgaagatggcctggatgaacatgacgatttctttgatgatgaaatgtctgatgaagaaattaagccaaacaagaagcagaaggcaaaggccaaagataaaggaaaggggaaaggaaaggacaaactcccagaacaacatttggaggatgaagcaaccagagaagagttggagcttttggttgcggctgacaaggatgcaggcaacggtgcaaagggttataacttgaagcgcaaaaagggtacgaagggcaagaagggtaaagagcaatctgttgaggacgaacttcccgacatagatcttagcaaagatgagaggttctcagccatgttcaattctcattggtttgcggtggatcctactgatccccagtacaaaaggtatactatgcgcattcgcccatcagactacttcagaattcatactactagtgtagcctacatgatctgcaattctgcatcttcttggttcagttttacacatgttaaattgctaactgttgctgatggttacttacaggagtgcggcctttatgcgcaagcaagctgggataaagggagcacatgaaccatctctgggaggtagaggtagtggtagaggtacattgccacctgatgatgtgcctaccgatactcatgaccagaaacctgatggcacatccacggagaagctggaaacaatgtctgcagtcaagtcactaaaacggaagcttactgcattaaaaaacacaagcaagagtgaccgatagagaaaagctttgctttaccctgatgaccaatgaacaagcttttttttttatttgtctatgacgagagttattttggctttagaatagtttttaggtatgttatttatgtttgctacctacctatgaaaatgtgtcaaaatttgggttttgacaatgatcaagtaggacaattttgttatccttaatattttcgaatatagttctattattttcaggctataaaattaaattatgatggtggctttgtaccaacattagtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0531700, RefSeq:Os07g0531700