BGIOSGA013225

From RiceWiki
Revision as of 15:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013225, complete gene.

LocusTag

OS03G0650400

Ensembl Transcript ID

BGIOSGA013225-TA

Ensembl Protein ID

BGIOSGA013225-PA

Length

5257

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29091780..29097036

Sequence Coding Region

29091780..29091827,29093205..29093364,29093489..29093565,29093697..29094796,29094910..29094994
,29095441..29095503,29095672..29095734,29095933..29096016,29096103..29096693
,29096908..29097036

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29091780..29097036 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29091780..29097036 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAPALAAAHLLDSPMRPQVSRYYSKKRGSSHSRNGKDDANHDESKNQSPGLPLSRQSLSSSATHTYHTGGFYEIDHEKLPPKSPIHLKSIRVVKVSGYTSLDVTVSFPSLLALRSFFSSSPRSCTGPELDERFVMSSNHAARILRRRVAEEELAGDVMHQDSFWLVKPCLYDFSASSPHDVLTPSPPPATAQAKAPAASSCLLDTLKCDGAGWGVRRRVRYIGRHHDASKEASAASLDGYNTEVSVQEEQQQRLRLRLRLRQRREQEDNKSTSNGKRKREEAESSMDKSRAARKKKAKTYKSPKKVEKRRVVEAKDGDPRRGKDRWSAERYAAAERSLLDIMRSHGACFGAPVMRQALREEARKHIGDTGLLDHLLKHMAGRVPEGSADRFRRRHNADGAMEYWLEPAELAEVRRLAGVSDPYWVPPPGWKPGDDVSAVAGDLLVKKKVEELAEEVDGVKRHIEQLSSNLVQLEKETKSEAERSYSSRKEKYQKLMKANEKLEKQVLSMKDMYEHLVQKKGKLKKEVLSLKDKYKLVLEKNDKLEEQMASLSSSFLSLKEQLLLPRNGDNLNMERERVEVTLGKQEGLVPGEPLYVDGGDRISQQADATVVQVGEKRTARKSSFRICKPQGTFMWPHMASGTSMAISGGGSSSCPVASGPEQLPRSSSCPSIGPGGLPPSSRAPAEVVVASPLDEHVAFRGGFNTPPSASSTNAAAAAKLPPLPSPTSPLQTRALFAAGFTVPALHNFSGLTLRHVDSSSPSSAPCGAREKMVTLFDGDCRGISVVGTELALATPSYC</aaseq>

Gene Sequence

<dnaseqindica>1..48#1426..1585#1710..1786#1918..3017#3131..3215#3662..3724#3893..3955#4154..4237#4324..4914#5129..5257#ATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGGTACAGACGCGCATCTTCGCTGACACTTCTTTCCTTGCGCCTTTTTTTTTTCAATTTCCATCTCCTCGCCTGGTTAGTTTCATTTCATTGATCGCATATGCTCAGTGTGTACGAGTTGCTTTTGCTGATTAAAATTCGATCGGTGGGGGTGAGTGTTTGGGGGGTTTAGATGGTTTGCTATTTGGATGCAGTTGCATGGTTGTGTGGATTTCTCTACCAATGAATGTCTTAGTAGTAATTGGATCAGTACACTTAATGCAGCTGATGGATTGAATCAATTTGGGTGGTTTGTTGTGTAATTACTAGCGATTGCGATGCATGTGTGGCGAAATTAGTGGGCTCAATCCATAGCTTAGTAGTAGAATCCAAGACTTGGAATTTCATGCAAAGATCCCTATTAGGCTTGTTAATCAATCTCTACATGTTGATGTTACGTTCTTTGGAACCGCACTTGTGGCGTACTATTTCCAGTCAATTTATTTTGCCTGCTGCCTGTTGCGAGTACAACCAGAAATTGCTGATTTTAGTGGACATGTCATAGATGGAACTATATGTGTCTTGCATGTTTCTAATGTTACTCATGCACGATAAGTGGTTTTGTTAAGTGAAAGATGCAGTTGGGGTAATATTAGTTCAAGTTGTTAATAAGTTGACAATGCAGTGATGCACGCTCTTTTCGTTTGGTACGATGTCCGGTTAATATGGTATATCTTGAAGATTAATTTGCATGTTCTAATTAACCAAAGGGCTTAAAATTTGACATGTTTCAGTTGTCCAACTAAACTGGAGATAGATACACGCGTCATTGAGTTTTCTTTTACTGATTAGGCGATTACTTTCTGAAAACCATATGTTTTGACCAACTTGCTGTCATAGTTTTTTTTTTTTTAACCTCATGGAGTGATAGAATTAGCAATAATGAACTTTAGTTCCTATATATGTTTAAGGTTCCATATACTTGCATGCATGTGCAATTTACTGACACTAGTGCTGTTAAGTTCAGTTAACATCAGCAGCTAATTAGTCTGGGCAGTGTCACAGAAAAAAAAATCTTAAAGCAATACTAGATCACAGACTCACAGCTAGTAATTCGGTTCACACATATGGATCACTTTGTCAGGAAATCATGCATGCACAGAAAAATTGCTCCCCTGTGTTTATTTTGCTTCTAGGTACAGTACAGAGTGGTACGTGATGTTAATTGGTGTCTCTCTTCCACAAGGCTAGAGGTTTAATTCCATCTCACGCACGCTGCACGCGCACCCTCTATCCCAAGCTTTCCCGTTTCAGTATCTCTGATCGCTCACTGCACCTGCATTACACGAGCCAAAACGCCTGACCTGTGCTTTGCATGTGTTGTGTTGGCCCATTTCCAAGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGTGAGCAGAGCAATGCCTCCAGGCTTTGAACTCTATCGTCTAGTTTATATTTGTGCAAGAGCAGTTCCCCCAACTCTGTTTGTGCCAAGTTCTTGAAAACCTGTGCTGTTTTTGGTTTGATCAGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCCTTTTTTTTTCTTACTCGTACACTCGACTGCTAGCTTTGATCTGGATTGATTTGATGAATTGTTCTCGAAATGTTTGATCTGGATTGCTTCTCGCTCGTGGTGTTGTGGTCTTTGGTGGGTGCAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGTCTCCTTTCTCTCGCTTTTTTGCAGCTTCTACTTCTTGTTTGGAGAAATACCAACATTTTTGTCAGTTCTACGAGTTCTGTGCTAAATTTCACTTGGGCTGGTGGTGTGAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGTATATAGCCCATCAATCCTGTCGATTATTTCCCTTGCATCCATTTTCCTTCTGTTTATTGTTGTTACTTCTCAAGAAAGCGGGAATGTTTTTTTGTTTGCCCATTGTGACTTAAAATGTAACAAGCTAATATAACACTTGAGTTGCATTGACCTGCTTGCCTGTATTTTGAGTTGCATTGACCTGCCTGCCTATATTTTGAAATCTAGTCCTTTTATTTGTTTTTTCAGAATTTCCATGTAGGTATTATCAGTAGTTATGGCAATTGGCAATCTGGTCTTTTTCAATCTCTGAAAGTGTAAATTGTGAAGGACATATATGCAGCCAGCTAAAATTTCTCAGCTTTACTTACATTGACAAAAGCATACACTTTTGGCATGCCTCTCTTCTGTTCTGCTCTGCTTTCCATTATTGGAGCACTCATTTCTTTAGCATTTGTTTTTCAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGTAACTAAACAACACCTCTCATCCTACTCCTGCGCTTTCATCTCAAACTATGCAAAAGCACTGGTACCTTGTTTAGCAACAAATGATCCACGTCTCTGATCATGTTCGATTATATGCCTGCACTTACATTAAGGTAAAACACATATCATTTCCTTGTTTAAATTACAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGTATACCCCTGCAGATACACCTGAAATTTCCACCATGATCTGCACTTCACCACACATTATGATTTTCAAGCAAACTAAGCAGTTATACTCCTTGGGACTATTTTACTTTGGTCCACCATGTTTCTGATTATTCTGTTGTACCTAGCTATTTGCATGTTTAATTATACAACTCTTGATCATCAACTGGTACCTTTTCAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGTTGGTTGCCCTTTGTGGGTTCTGCTTCTAATTGTACCTGAAACACATGCCTTATTCCAAATCACCTGACACCTCTGCATGCACAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGTAAGTTCAAACATCTGCATCCGCACTTTGATTTCAACTCCCAACTCCTCCCAAGAACTGGAATTCCTTGAGCCTGTCAGATGCAAGATGGACGGCTTGGATGACCAACCAGTCACCCACAGAGAACACTTCTCTTCCCTTCTCTTTCTTCAACATGTGACACCTGACACTGATAATCTCGTATTCATGGCTGGCTGTTCGTCTGTCTGTGCAGGACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013225