BGIOSGA013334

From RiceWiki
Revision as of 15:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013334, complete gene.

LocusTag

OsI_13028

Ensembl Transcript ID

BGIOSGA013334-TA

Ensembl Protein ID

BGIOSGA013334-PA

Length

8467

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31061103..31069569

Sequence Coding Region

31061103..31061114,31061202..31061281,31061384..31061498,31062470..31062521,31063470..31063609
,31064124..31064234,31064315..31064440,31064949..31065116,31067113..31067208
,31069227..31069397,31069486..31069569

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31061103..31069569 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31061103..31069569 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACTCAAGGAATACGAAGAAGCTTGTACTGCATTCATGGCTGGAACAAAGCTCAATCCTTTAAACGATGAAATGCAGGATGCATTTTGTTGTATGCTGCGTGATATGTCAGTGATTATGCCTCTGACTGAAACCAACCCATATGTTGACATTTGCAGGGAGGCAGCTAAAGGAATGATGTATGAACATATGGCTGGAAAGCGCAGGCAACATATGAAACATTATAGTATTTGTCCTAATCTTTATCTAAGAGCAGGTCATGATGAAGTAGCACGACTGTTGCTATCTAGAGGAGCTAGCATTGATATAGCTTATTTTCATGGGACACCACTACATATTGCTGCTGCATATGGGAAGGCTGGAGTCATGAAAGTTTTATTGGAGCACCATGCAGATCCAAACAAGGTTTCAGAAGAGTTGGGTACACCGTTGGTTGCAACTCTTCATGCTACTTCTCAAGGACTAGCTGAGTCTGTTTCATTGAAGTGTGTAAAACTACTCGTCGAGGCAGGTGCTGACGTTAACTTCAGTGATCGTGACACTCCGTTGGTGGTAGCAATTACTAATGGCTTGACTAACTGCATTAAATACTTGCTAAAGGCTGGTGCAGACCCTAATATCCCAACTTGTGATTGTGGTGCCTTGCCAATACAACTTGCTGCAAGCTATGGAAGAAGAAAGGACGTGGAGTTACTGTTCCCGTTAACTTCCCCCATTCGAGCTGTGTCAAACTGGACCGTTGAAGGAATTCTTGCCCAGGCCAAATCGGAACATGCCAAATCAAAATGTTCAAAGCCCAAGGAAGATGGTCAGAATGAAAAGGCTCAGCTCAAACTATGTGGTGACAAAGCTGTTAAGAGAAAGGACTACCGTGGTGCCTCAAATTTCTACAGTCAGGCACTTGAGCTAGATTATTTTGATGCAACCTTGTATTCAAACAGAAGCCTTTGCAACCTACAAATTGGAGAAGCACAAAAGGCTTTGCTTGACGCAGATAGATGTGTAGAACTGCGGCCTAAGTGGGTGAAAGGTCACTACCGGGAAGGAGCTGCTTTGATGGTGCTAAAGGAGCACAAGAAAGCATTTGAGGCATTCTTGAACGCGCTGAAACTGGATCCTGCTAATGCCGAGACTGAGAAAGTGATGTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MALKEYEEACTAFMAGTKLNPLNDEMQDAFCCMLRDMSVIMPLTETNPYVDICREAAKGMMYEHMAGKRRQHMKHYSICPNLYLRAGHDEVARLLLSRGASIDIAYFHGTPLHIAAAYGKAGVMKVLLEHHADPNKVSEELGTPLVATLHATSQGLAESVSLKCVKLLVEAGADVNFSDRDTPLVVAITNGLTNCIKYLLKAGADPNIPTCDCGALPIQLAASYGRRKDVELLFPLTSPIRAVSNWTVEGILAQAKSEHAKSKCSKPKEDGQNEKAQLKLCGDKAVKRKDYRGASNFYSQALELDYFDATLYSNRSLCNLQIGEAQKALLDADRCVELRPKWVKGHYREGAALMVLKEHKKAFEAFLNALKLDPANAETEKVMW</aaseq>

Gene Sequence

<dnaseqindica>1..12#100..179#282..396#1368..1419#2368..2507#3022..3132#3213..3338#3847..4014#6011..6106#8125..8295#8384..8467#ATGGCACTCAAGGTCAGAAAAGAAAAAAAAAATGCAAGTTTTTCGTTGTGTGATACATCATTTCCCTGTCATTATCTTATCTATGTTTTTATATTCCAGGAATACGAAGAAGCTTGTACTGCATTCATGGCTGGAACAAAGCTCAATCCTTTAAACGATGAAATGCAGGATGCATTTTGGTAATCTTTGTACCTATTTTACTTTATAACACAGATTTTCTTAAATGACCTCCGACACGGTTCCATGAATCAAAATATGCTAATTCATGAATTTTTTTTCAGTTGTATGCTGCGTGATATGTCAGTGATTATGCCTCTGACTGAAACCAACCCATATGTTGACATTTGCAGGGAGGCAGCTAAAGGAATGATGTATGAACATATGGCTGGAAAGCGCGTCAGCTCGGTTGATTAGAGGTCATCGGCGTGTTCGTGCTCTGTTCTGTTTCTTTTGGACCCGAATGTCAGCTTGGATGGTTTAATTTCGTGTTAGTACTTGTGTCTATATGATGTTTCTCGTTGGTTAAGGACACAGCGAATTGGTGGTGGAACAAGGGCTCGATTCCGCGTGGAACCGATGTTTTCACATAACATTTCTTGAAACAGTACTTAACGTTACCTGTTTGCATGAGCGTGTTCTTTGATGATTGTATCTTGGTGAGAACCATGCTGTATACGTCTTACTTTGACTTTGATCAAAGCTAAACTGTTTTAAATCTGACCAAATTTATAAGAAAAGATAGTAATATTTTTTATCTAAGATAAATTTATTATAAAAATATATTTAATTATTAATTTAATAAACTAATTTGGTAATATAAATATTATACTATATTTTTATACTACAAAATATCTTATAATCTAAAACGGAGTCAAAATATCTTATAACCTGAAAACGTCCGCCGATCCAGTTCATCCCACGCTCCGCCTCTACCCCCTCTCACCCACGTTCCCGCCTACCTCCCTCCTGGCCATCCCATAATAAAAGCGCCTACCTTCCTCCTGGCCATCCCATAATAAAAGCAGCTTTGGCCGCGAGGCTTCTCCTGGAAGGAAACCACTCTTTCCTCCACAAGTCCATAAGGACAGCGAGAAAACCCCAAAAAATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTAAATTGATCTATTTTATTCACTTACGAAGAGACAACCCATACAATATATCACCTCTAGTACATAAATACCAATATCTCTAATACTCTCACATCCTTGTTGAAATTTGTGTGAAGGTTTGCCTTTTAATTTAGGGGTGGCTCATATTATCTCTCCTCACTTCTCTCCTCCACCTTATCACTCAATCCAATGTGACACTCTTAGAGGCAACATATGAAACATTATAGTATTTGTCCTAATCTTTATCTAAGAGCAGGTACAAATTGTACAATAGCAAGCTATAAGCCAGCTGCAAACATATTTTAAGGAGATAGATAAGGAGAGAGAAGAGTAGCGGGCTACAGATTTGTAGCCAGCTGTAGCACGGAAGCCAGCTGCAAACATATTTTAAGGAGATAGATAAGGAGAGAGAAGAGTAGCGGGCTACAGATTTGTAGCCAGCTGTAGCACGGACTCCAAGACGCGGTGTGTGTATGATAGATAGGACCAGGTATTAATAGTGTACTAGTATATAACTATTGTATGGATGAGCTATTAAATTGACTATAAATGAATTGGAGTTAGTAGTTGGTTATACTATTAAAATTAAACTTGCTCTGAACGGTCCGTGAGAGGGACAATATATTGAACATTAGTACTTGCCCTAATCTTTTTATCCAAACGGCCCATGAGAGTGTGAGACGCGCAGCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTGCGGAGTCCAGACCTGGAATGCCGATTAGCATCTCTGTTCCGTTTTTTATGCCACTTCTCTGACAAGCTAGATGAGCTCACTCACATGTTTTGATTTTTTCTACGAGTTGGTATATCTTATACATATTCCAGTTTTACTTATTTTCATTATGAATATTAGTAGATCCTGGAACTTCTATTTGCCTTGTTATAATAAAGTGGGAACAAATATATTCTTGTTCGTGCGATCAGTTTCCCGAATGATCGTATTGGATGGCATCTTAAATAGTTCATTTCAGCCAATAGCCATCAAGTAAAAGATGCATGCTTTGGTGTCTAGGTAGGACAGTAAAAATATTATTTTTATGAATCATGCATCTTTTAAGAATATATATATTTCTGTTGTTTAGCCATCTGTTTGATAAATGCTTATTTTCATGGTAATTTTGTCATGTTATTTTTGTGCATCTTGTTTAGGTCATGATGAAGTAGCACGACTGTTGCTATCTAGAGGAGCTAGCATTGATATAGCTTATTTTCATGGGACACCACTACATATTGCTGCTGCATATGGGAAGGCTGGAGTCATGAAAGTTTTATTGGAGCACCATGCAGATGTAAGTAGATTCCATGTCTTCTCATATTAGCTTTTGGTGCTAACTTGGTACAATGCAAATGCATTTAGTGTTTTGGATCACAGTTTCATTTAGTATTTCTCTTGTGAACCTTGCCACTCAAGCTGGTGGGGTGATAAATCTTACCCATGCCATGAAAAACGTTTTTTTTTTGTTCCAATTGATCAACACACTCCATATACATTTGTGTTGATGAAAAGCTGTTGTTGCAGTTGACACTTAGCCATGTATTGCAAATTGCATAGGACTAATGATTTTGTTGCCCGATTTCTAAATAAAATACGGAGGTTCATGAGAAGAGCAGATACTTTTTAGGGAATGCACAAAAGGATTGCCCATATTTGTATTAAGAAGAATAACCGCATGCTCCTATTTATATTTTGCAGGATATATTTTGCATCTATATTTATATCCCAACATTTAATATCTGGCATATTATGTAATTAATGTAATTCAATATGTTTTCACTAAAAGCAGTATTTTTTTCCCAATTTAGCCAAACAAGGTTTCAGAAGAGTTGGGTACACCGTTGGTTGCAACTCTTCATGCTACTTCTCAAGGACTAGCTGAGTCTGTTTCATTGAAGTGTGTAAAACTACTCGTCGAGGTAACTTGAATCCTCTTTATGTGATCAATCTATTTGTATGAACAGTGGCATTGACAATTTTGTCTGTTTCATACAAATAGGCAGGTGCTGACGTTAACTTCAGTGATCGTGACACTCCGTTGGTGGTAGCAATTACTAATGGCTTGACTAACTGCATTAAATACTTGCTAAAGGCTGGTGCAGACCCTAATATCCCAACTTGTGATGTGAGTTTTTGTATTCTTTTGACTTCCTCATTTCCTTTTCTTATCCAAAAAGTTGTGACCAATGCTAGATATGCCCCCATTATACATAATTATGGCTTATCACCTTGAGCCCTTGGGCCTTGACTGTCGAGAATTTGATCTGACTACTAATATGAGTAGCTAAAAGGTTGAAATGAATCGTGCTTGTACAAATAATTAAGTTCTTTTGCGAGTATGTAATTGGTTTTTGGTTTGAGTGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTTTCGAAAAAAATATCTCCATCTATTTGTGCACATTTCTATTTATTAATGGCTTATATACTTCTGCTGTTATTTGTATAATGAATGCTTGTGATATTCCTGCCTTGGTCTATATTGCTTTTGAGGTAGTAGTTATATAATTGTTGTTCTGTTACTTTGTAGTGTGGTGCCTTGCCAATACAACTTGCTGCAAGCTATGGAAGAAGAAAGGACGTGGAGTTACTGTTCCCGTTAACTTCCCCCATTCGAGCTGTGTCAAACTGGACCGTTGAAGGAATTCTTGCCCAGGCCAAATCGGAACATGCCAAATCAAAATGTTCAAAGCCCAAGGTGTGAGTGAAAACAATTCGTTGTGACTGTTCTGTATTTCCTTATGTGCCTGTCAATTTTTTTATAGCTTAAATATTCGCACCTATGCTTTGGGTCACATGAATGTATTGATGATATTGTTTTCTCTAGTGCATATTACTCCCTCCAGTTTTATATTGCTATTATTGAGGTTCAAGTTGGGATTGTAGAAGTATGAGCTGCCCCTATGAAATGGACCCACATACATCTAGTTTCCTATTATTATGATCGAGAAACAAAGAAACACATATTAGGTCTTGCTTGATCAAGTCTCCTAGCTAACGGGATAGGCCTACCGCCAACAAAATCTGGTATGGCTAAGTCCTAGTCTTTGGACCCTTATGCTTGGGTATTGATTCATGGATATGGTACAAATCCCAAGACTAGGATGGAGGTGGAATTGCTCTCATCAATGGTGAGCTTCCCAAAAGCTAGGAGGTTGTGATCAACCTAAGTGTTTGTTGATTGCTTGATCGTAATAATTGCATTGGGTCCCTTTCACATGGATGACTCAGGATGCTGTAGTTCCTGTGGGACTGCTCATGTTAGCTTGATCCGCAATATTGGATCCTTACATTCCTTACCAATTAGAAATTTAGAATACACAATAACTAATCCCAATGTTAGGAAATTTATCAATTATTTATTCGTTGAATATTCTTATTTTGATAAGGAAAGCCTTAATCCTGATGATAGGTATATTCTGTACTGTTTGAGCTATACAAACACTCATAACACAGAATGTCATAATCTTATCCCGTGCAAGGAGGGTAGTTTTTTTTTTCTAGATTCCTTTCATACTAGTCAGGGCAAGGAAAACTGCCAGAGAGTTTGGTATGATTTCTACTTTTTGACATAGCAGAAATGAAGAGACTCATTATTTGTTGTTTTAGTTTTATTTGAGAAGTACTTGATGTGATGTTATTTGGTGATACATAAGATTTGCAGAAAATCTTAGAAAAATTGGAGTTTGCAAAGAATTAATGACCAGTAACTGTCTAGGTATTGACCAATAGCTACACATGTGGTCCAAAAACATAAGCTCAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAAACCGAATGTTTTGTCACAACTTCTCTTCTTCGAAGCATGATAATTCTTGGCTTGCAACTTGGATGAAAAAAAAAACAATGGGCCACACATCAATTTTAAACAAGCAGTTGCGCTAAACGAGGTTGTTATAATCAAGCTTTATGCCAAAAGTAATCTAACCCAGATCAGTTGATCATATTTGTATTATGAGTAAGCTAATTCATGGTATGTACAGAAATGAGTTGGCTAGAGATTAATTAATGTCATCCCGCTCCTAGTCCTAGCTGTTGATCTTATTATATTTATCCAATACAGGTCGTATTAATGCTGGTACTGTTTCAGGAATTACTCTGGATTGATTAGTTCTTCTTGTGCAGACTATAAACTGTGGTGTTTGGTTCATCATCACTGTTTTCTAGACAGCGTGGTGTGGCCTCTATTATTTGATCCATGGAAATGGTGTTGCCTTTGTAGCACCTATTGGCTTATTTTTGTTGCACCTGCGTAGTAATTAGTACCAATTTTTTCCAACTATATGTGAATGAGATATCAGGTAGAAACTGATATCACCCTTGTGGTTTTCTATTTTGAAACATACAAGAGTGGGTTATTGTCTTAGTTTTTGCACCTTATATATTGTGGTTTCATTTTTAAATCAAAATTCGATATGCCTTATATTGCTATATAAAATTGTTTCATGAAATTATTTTTTATCTTCAGAAGATTTTTGATATGGCTTTTATTGCTATATAAAATTGTTTCATGAAATTATTTTTTATCTGCAGAAGATTTTGTACATTTAATGTTGGTACATTGGCTAAATTGGTTTGTTTTCGTGACGTAGGAAGATGGTCAGAATGAAAAGGCTCAGCTCAAACTATGTGGTGACAAAGCTGTTAAGAGAAAGGACTACCGTGGTGCCTCAAATTTCTACAGTCAGGTATGATGATGTGAGCAAGCCTCATTTTTTACATCAAAGACAGTATGGTCTGTTTTGGATATATCTTCTTTGCAACACATGTGCATAGATGTAGAAAAATACTCTAGTCAAAATATTTATGGTGTTTGACTTTTTAGTCAAACTTTTGAAATTTTGACTATCAATTAATTTTAAATTATTTAGTTTCAAAACATAGAATTGGTATGTTTAGATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTATCTTGGGTCGAAAATATTACTACTTTTTTCTATAAACTTGGTCAAACCTGAAGCAGTTTGAATTTGACCAAAGTCAAAACATCTTATAACCTGAAACGGAGGGAGTAAATTGTATGTCTATTTTCCTATATCTGATTATGTCATGGACATTGGACACTTAGAGTTTTTGTGTGCCTAAGCAAATTGACCAGTTGACAATTTGTAACTGCTTCCTCCGTTTCATTATGTAAGACTTTCTAGCATTATCCACATTTATCTAGATATTAATAAATCTACACACATATATATGTCTAAATTCATTAACACATATGTGAATGTGGGCAATGCTAGAAAGTCTTACATTATGAAACGGAGGGAGTATAAGTCTTAACCAAATTACAAACCATTTTTATAATGTAAACTACATGGTGTTGGATAAAATCTATGGCATCTTCTAGATGTGCCGAAGTTGTTTTGTCAGAAAAAGAAGAATACATAGGAGGGACCATGCATCTTTGATTTTATGGAGTGGGGATATCAACCCTCATAGTTATTTTACGAATAACCTATAAAGAGAAGAAAAACGAGAGACTAGGCTGAAAGATTTGCATAAATAATATTTCTTCGTCTGGGTGCTACTATATTAGACAGCTAGCATATGGAAAGTTGGACACTATTAGCTACGGTGGTTTTCAAATTGAAACTTTAGCCTAAAATGAATTCCTGATTGATGCATTCATCTTTCACCAAATTTCCCTTACTGCCTCACTCTTTTATTTTGTACATATTATGCACTTCTATCTTCAATTTGATGTAGGCACTTGAGCTAGATTATTTTGATGCAACCTTGTATTCAAACAGAAGCCTTTGCAACCTACAAATTGGAGAAGCACAAAAGGCTTTGCTTGACGCAGATAGATGTGTAGAACTGCGGCCTAAGTGGGTGAAAGGTCACTACCGGGAAGGAGCTGCTTTGATGGTGCTAAAGGTCAGAAAATTTGTTGCAGTGTGCTAGTCACATGTTGCCCTTTACATAAGCTTCATGTTAGATCATCCCCCCAATTTTCTGTCCACAGGAGCACAAGAAAGCATTTGAGGCATTCTTGAACGCGCTGAAACTGGATCCTGCTAATGCCGAGACTGAGAAAGTGATGTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013334