BGIOSGA013361

From RiceWiki
Revision as of 15:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013361

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013361, complete gene.

LocusTag

OSJNBA0022C08.9

Ensembl Transcript ID

BGIOSGA013361-TA

Ensembl Protein ID

BGIOSGA013361-PA

Length

6352

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31576246..31582597

Sequence Coding Region

31576246..31576680,31576878..31577336,31580405..31581971,31582194..31582597

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31576246..31582597 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31576246..31582597 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGCTGGAAGCATTCGCGGCCAAGCTGGCGAACGTCCTGGTGGGGATGGCGAAGGAGGAGGTGGAGACGCTCCTGGGCGTGCCCGGCGCGATCGCCAAGCTCGAGACGACGCTCGCCGACCTGAGCAGCATCCTGGCCGACGCCGACCGGAGGCGCATCCACGACCCGGGCGTGGAGCGGTGGGTGAGGGAGCTCAAGGACGCCATGTACGACGCCGACGACATCCTTGACCTCTTCCGCGCCATGGAGGGCGGAGAAGACCCCGGCTCACCGCCAAGAGCTGCTCCGGCGCCGTCGGCGTGCTGGAGCGCCCTCTGCCGCCGCAGCCCTGCCGCTACGCGCAAGATCGGGAGGAAGATCCAGGAGCTCAACCGGAGGGTGGAGGAGATCGCGAAGAGGAGCTCCCGCTTTGGATTTGTCTCCCAAATCGTCAGGCGATGTCATCGCCGTCGCTATCACCGGCGCTGGGGGATAGGCAAGACCACGCTTGCCAGGATGGTCTTCAACGACGCCGTGTTGGAGAGCCACTTCGACAAGAAGGTATGGCTGAGCGTGAATCAGGAGGTCAACGAGGTTCACCTCCTGCACGGCGTGATCGCCGCGTTTGGGGGAAGCTACCATGGCTGCGCCGGGGACAAGGCCCTGCTCGAGGACACGTTGAAGCATGCCGTGAGGCAGAAGAGGTTCCTGCTGGTGATGGATGACGTGTGGAGCGATAGGGTGTGGAGCGATCTGCTCCGAGCACCGCTCGGTGCTTGTGCTCCTGGAAGCCGAGTGTTGGTGACGACGAGGAACGACGGAGTTGCTCGTGGGATGAGAGCCCAGCACCTCCACCGGGTTGAGAAGCTGGATCTAGGTGATTCTTGGTCACTGCTAAAGAAGCAGGTAGTTCTGAACGAGGGCGATGAATCTGAGATTGATGGACTAGAGGACATCGGATTGAAGATCGTAGAAAGATGTGATGGCTTGCCACTTGCGATTAAGGTTGTGGGTGGACTCTTACTGAACAAGGGCAAAACGAGAGATGCTTGGGTGAACGTCTCTAATCACTTTGCATGGTCAATGACAAGAAGCAATGACGACATCAACAAAGCGGTCTATCTGAGCTACGAAGAGCTGCCTCCGCATTTGAAACAGTGCTTCGTGTTCTGCTCACTTTTCCCTAAAGATGAACTGATCATAAGAGGAGTAATAGTCAGGATGTGGATTGCACAAGGTTACGGACATGACATAATGAGATCGACGCTACCTGAAGATTTGGGAGTTGAATATTACAATGAGTTGGTGTCACGGAATCTTCTAGAGCCATACAAACGATCCTATGATCTATCAGCAAGCACAATGCATGATGTTATTCGCTCCTTTGCTCAACAGATAGTTAAAGATGAAGGACTACTTGTCAATGACAGACAAGATGTGCATGGTATTGCAGGTGCTTCAAAGCTGCGTCACTTGTCTGTATCCAAAACTGCAATAGAGCGGGTCGCTATACAAAAGCAAGTGTCATTGAGGACATTGTTGCTCTTTGGGAGATGTATAACTGAGTTGACGTATTTCAGGAACAATATCTCTTGCCTAAGAGTACTACATTTACAAGGTGTAGATCTTGTTGACCTGCCGGACTATATATGCCATCTCAAGCATCTAAGATACTTGGGGCTTGCAAATACAGGCATATCTGCAATCCCTCGAGGCATAGGAAATCTAAAATTTCTACAGTTCATTGACCTTATGGGGTGTCGGAATTTTCATCAGCTTCCTGACAGCATCTTGAAGCTACAGAATATGAGGTTTCTCGACTTCAGGGGCACGAGGTTAACCTCAATTCCTCCAGGTATGGGAAAGCTAGAAAACTTGGTGAACATGTTGGGGTTCCCAACTTATTTGGATGACAGGGGACATGCCTGGAGCAGCTTGGAAGAACTACGGTCTTTGTCGAACCTAAAATGGCTTGATTTAAGAGGTCTAGAGCTTGCATCTTCAGGCTCTATGGCTGCTACAGCAATGCTCAACAGTAAAAAGCACTTGAAAATCTTAGACTTGACATTTGCCAGTAGGCTCACCGACAACGGGATGATCGAAGGAACCAGCAATGTAATCGAGGAGCAGGAACGAGCCGAGGTTGTGTTGAGTAATCTCTGTCCTCCGCCTTGCGTAGAATGTCTTACGGTCAATGGTTACTTTGGATATCGACTACCCCGATGGATGAGAACAATGTCGGACTTTCCAAGCTTAAGGCGTTTGGAGCTGAAGGACTACGTATGCTGCAAGCAGCTGCCTGTCGGCTTGGGCCAGCTCCCTTTTCTTGATTATATTTGGATTGATCATGCTCCATCCATCGTGAGCATTGGCCATGATCTCCTCTTCCTCTCCTCCTCTAGTGCTGATGACCAGAAAGTCACAACTGGAACAAGGATCACTAGGAAGCTGCAGCTCCATGGTCTTTCTCGCGAGAACTTCCCGTCACTTGTGGAGCTCACGTCAGCTGACAACCCGAAGCTGCAGAGGATCTCCAACAGTCCAAGACTGCGACATATCGTCGTTATCAGATGCCCAGGGCTGAAGGTAGTGAAGGATTTGCAATCACTTAGGAGCGTCATTTGGAAGGATTTGGATGCTGATGCCCTCCCAGAGTACCTACGAGAGACAGAGCTAAATAAGCTGGACGTGTACTGCAGTCTAAGATTGCTTAAACTCATATCCTTGCAAGATGGCAGCTATGAGTGGGAAAAGATCCAGCACGTCCAGCTACTGAAGGCATATGGGAAGAGATCAACGGAGGATAAGGTTGACCGGCACATCTTCTACACTAAGGATCCGTACTCGTTTGAAGCAGATATGGGCGAAGATCTATGA</cdnaseq>

Protein Sequence

<aaseq>MAAALEAFAAKLANVLVGMAKEEVETLLGVPGAIAKLETTLADLSSILADADRRRIHDPGVERWVRELKDAMYDADDILDLFRAMEGGEDPGSPPRAAPAPSACWSALCRRSPAATRKIGRKIQELNRRVEEIAKRSSRFGFVSQIVRRCHRRRYHRRWGIGKTTLARMVFNDAVLESHFDKKVWLSVNQEVNEVHLLHGVIAAFGGSYHGCAGDKALLEDTLKHAVRQKRFLLVMDDVWSDRVWSDLLRAPLGACAPGSRVLVTTRNDGVARGMRAQHLHRVEKLDLGDSWSLLKKQVVLNEGDESEIDGLEDIGLKIVERCDGLPLAIKVVGGLLLNKGKTRDAWVNVSNHFAWSMTRSNDDINKAVYLSYEELPPHLKQCFVFCSLFPKDELIIRGVIVRMWIAQGYGHDIMRSTLPEDLGVEYYNELVSRNLLEPYKRSYDLSASTMHDVIRSFAQQIVKDEGLLVNDRQDVHGIAGASKLRHLSVSKTAIERVAIQKQVSLRTLLLFGRCITELTYFRNNISCLRVLHLQGVDLVDLPDYICHLKHLRYLGLANTGISAIPRGIGNLKFLQFIDLMGCRNFHQLPDSILKLQNMRFLDFRGTRLTSIPPGMGKLENLVNMLGFPTYLDDRGHAWSSLEELRSLSNLKWLDLRGLELASSGSMAATAMLNSKKHLKILDLTFASRLTDNGMIEGTSNVIEEQERAEVVLSNLCPPPCVECLTVNGYFGYRLPRWMRTMSDFPSLRRLELKDYVCCKQLPVGLGQLPFLDYIWIDHAPSIVSIGHDLLFLSSSSADDQKVTTGTRITRKLQLHGLSRENFPSLVELTSADNPKLQRISNSPRLRHIVVIRCPGLKVVKDLQSLRSVIWKDLDADALPEYLRETELNKLDVYCSLRLLKLISLQDGSYEWEKIQHVQLLKAYGKRSTEDKVDRHIFYTKDPYSFEADMGEDL</aaseq>

Gene Sequence

<dnaseqindica>1..435#633..1091#4160..5726#5949..6352#ATGGCGGCGGCGCTGGAAGCATTCGCGGCCAAGCTGGCGAACGTCCTGGTGGGGATGGCGAAGGAGGAGGTGGAGACGCTCCTGGGCGTGCCCGGCGCGATCGCCAAGCTCGAGACGACGCTCGCCGACCTGAGCAGCATCCTGGCCGACGCCGACCGGAGGCGCATCCACGACCCGGGCGTGGAGCGGTGGGTGAGGGAGCTCAAGGACGCCATGTACGACGCCGACGACATCCTTGACCTCTTCCGCGCCATGGAGGGCGGAGAAGACCCCGGCTCACCGCCAAGAGCTGCTCCGGCGCCGTCGGCGTGCTGGAGCGCCCTCTGCCGCCGCAGCCCTGCCGCTACGCGCAAGATCGGGAGGAAGATCCAGGAGCTCAACCGGAGGGTGGAGGAGATCGCGAAGAGGAGCTCCCGCTTTGGATTTGTCTCCCAAGTAATCCACTCCTCCTCGGCCCTTCGTCTAACCGATAGACCCATGTGTTCTTGCTCGTCAGAAAGCAGCCGCAACCGCAAGACGGGACCATCCATCATTCGATCCGATGTTGTCGGCGACAAGATAGATCTTCACACAAGGAACCTCGTTGATCTGCTGATTGGCAACAAGCTGGCGGATGGTCGCACGCGCGCAAGATCGTCAGGCGATGTCATCGCCGTCGCTATCACCGGCGCTGGGGGATAGGCAAGACCACGCTTGCCAGGATGGTCTTCAACGACGCCGTGTTGGAGAGCCACTTCGACAAGAAGGTATGGCTGAGCGTGAATCAGGAGGTCAACGAGGTTCACCTCCTGCACGGCGTGATCGCCGCGTTTGGGGGAAGCTACCATGGCTGCGCCGGGGACAAGGCCCTGCTCGAGGACACGTTGAAGCATGCCGTGAGGCAGAAGAGGTTCCTGCTGGTGATGGATGACGTGTGGAGCGATAGGGTGTGGAGCGATCTGCTCCGAGCACCGCTCGGTGCTTGTGCTCCTGGAAGCCGAGTGTTGGTGACGACGAGGAACGACGGAGTTGCTCGTGGGATGAGAGCCCAGCACCTCCACCGGGTTGAGAAGCTGGATCTAGGTGATTCTTGGTCACTGCTAAAGAAGCAGGTAAGACTATCACATAGTATCTATCTATCTATTATCTATCTATCTATTATCTATTATTAAGACAGCTCGAAAAGAAGGCACCACGTTCGCTGTGGAGGCTAGAAATTTCCACATTAATCGGAGAAAAAGAAAAAAAAGAAAAAGAGAGTCCAACTAGAAATACAATCTAAAAAAGAGCTGAAATTCGAAATTAAAAATAAGCAATATTGACAGAAATTTCTATATAAGAACCCAATACGAGATTAATTAAAATTCGAAATAAAAATAAAATAAAATTCAAAATTAGAAAAAGAAAAGGTGAGTCCATGTAGGAATACAATCTAAAAAAAGCTGAAATTCGGAATTAAAAATAAGCAATATTGAAAGAATTTTTCATATAAGAACCCAATTCGAGATTAATCAAAATTCGAAATAAAAATAAAATAAAATTCAAAATTAGAAAAGAAAAGGAGAATCCAAGTAGGAATACAATTTAAAAACAGCTGAAATTCGAAATTAAAAATAAGGAATATTAAAAGAAGAATCCATATAAGAATCCAATACGAGATTAATTAAAATTCGGAATAAAAATAAAAATAAATCCAAAATTAGCAAAAGAAAATAAAAGAAGAGTTCAAGTAGGAATACAATTTAAAATTAGCTGGAATTAGGAATTGAAAATAAGCAATATTAAAAGAAGAATCCATATAAGAACCCAATACGAGATTAATTAAAATTTAGAATAAAAAATAAAATAATAACCAAAATTAGAAAAATTAAAAGAGAGTTCAAGTAGGAATACAATTATAAAACAACGAAAATTGAAAATAAAAAAATAAAAACATTAAAAGAACACAATACAGTATTAGCTAATTTTTTATGAAATAAATTCTGGAATTAGAAAAAGAAAAATAAAATTTCAATTAGGAATACAATTTTTAAATAACTAAAATTTGTGATAAAAATAAAGACTATTAAAATAAAAGACCATCTAAAACACATGACGAAATAAATTAAGTAACATGCCTATAAAGAAGTAGAGTGGTGGTGGTTGATACGACATATAAAAATTGTTAATAAAACATCAAATAAAATCCTAATGACGATTAAAAGGAGGGACGTCAGGCAGACCGTGAAGCAAACAAGTAAGGTGGTGGCCAGGACTTCTAGAAAGTAAAAAAAACATTTATAATCATTTCGATTTTTAAAATCTCAATGACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGCAGAGCCGCCGACGGTTGATGGGACTTCTAGAAAATAAAAAATGAATTCCAATGATAGTTATGTTCAATTTTTAGAATCACAATGACAATAAAGAGTATGCGGCGGACGGGCTGTAAAGGGGCATAGTGGCCTCGTTTGATGGGACTTCTAAAAATTATAAAAAATAAAACAACAAGTTCATTTTTTAAAGGTTCGGAATTTCTAAAAGAGTACAAAAAAAAAACAATGCATAATCAGGTTCGATTTTAAAATCTCAATGACAATAAAGAAAGGAGATAGCGGACGAGCCATAGAGGAGTACAATGGCAAAGCTACTGACGGTTTGGCGGGACTTCTAAAAAGTAAAAATGAACCCAAACGATAATTATGTTCAATTTTTAAAATCTCAATGACAATAAAGAGAAGAGACAGTGGACGGGCCGTACAGGAGTGTAATGGCAACGTTTGACGGGACATCTAGAAATTATAAAAATGAAACTCAACGTGACAATAAACTCTAAAAACTACAAAATCCAATTTTTAAATGTTCCAAGAAGAATGGATAGAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAAGAGATAGCATAAGAGGTAGCAACTGGTGTGACTTTTCAAAACTATATAATTAGAAACACGAGGATGATAAGTTTTGGTCTTTCAAAGTCTTAATACAATGAGATAGCTATTAAATAAATTTTAAGTAAAATCATATTTAAAAAATATATGATTTTGTTTGGGTGCTAGCCGCGCAATTGCGCGGGCTACCCAGCTAGTTAATTACTAATTAGTACTGAGATGCACATTACTAATTACTCCCTCCATCTAATTTTAATAGTCATATTTTATTTTGGCATACTGACCAAGGATAAGTAATTCTACTTATCATCCATTTAAACATGTTATTTCTCGTTAACAAGCGATTCATTAATATTTACATTTCTCGATGCCCATGCAGCCAATCTTGTGTGGAAGAATGAAGAGTCACGCATTAAATCTGAGAAAATCATTAAGATGATAGGTTGTTGGATTGAAATATGCCTATTAAAAATAAATTTTTCAGATTTGGAAATATGACTATCAAAACTAGATGGAGGGAGTACTAATTATTACTCCCTCCATCCCATAATATAAGGGATTTTGAGTTTTTCCTTGCAACGTTTGACCACTCGTCTTATTCAATTTTTTTTGAAATTATTAATTATTTTATTTGTGACTTACTTTATTATCTACAGTACTTTAAGCATAACTTTTCGTTTTTTATATTTGCAAAAAAAAATTTGAATAAGACGAGTGGTCAAATGTTACAAGTAAAAACTAAAATTCCCTTATATTGTGGGACGGAGGGAGTATTAGTACTGGGAATAATTGAATATAGAATAGAAATGTGTATCTCTGTACTACTCCGTCCCAAAATATAAGAACACCGAATAGGACAATTTCTAGGATTACGAATCTGGATATTTCCTAGTACTATGAATCTGGACATATAGCCTGTCTAGATTCGTAGTACTAGGAAATGTCCTATCCGGTGTTCTTATTGGGACGGAGGAAGTACTAATTAGTGAGATGCACATTACTATTCTATATTCAATTATTCACAGCAGCACATACATGCGTTGGTGGATGGTATTTCTCTTGCTCCTACAAAATGTGAGGCTGTTACTAGTATTTCTGCTCAGAGGAAAACAAGTGTTTTTAGCACAAATTAAGCCGTTGAAACCAACGGAAAACAACTTGATGCAATATATTTTACTAGTACTAGGTTTTTTCTCCCTAGTTTTGTTCCTCTCTTGCTCTCTGATGTGGCAATTCTCCAACAGGTAGTTCTGAACGAGGGCGATGAATCTGAGATTGATGGACTAGAGGACATCGGATTGAAGATCGTAGAAAGATGTGATGGCTTGCCACTTGCGATTAAGGTTGTGGGTGGACTCTTACTGAACAAGGGCAAAACGAGAGATGCTTGGGTGAACGTCTCTAATCACTTTGCATGGTCAATGACAAGAAGCAATGACGACATCAACAAAGCGGTCTATCTGAGCTACGAAGAGCTGCCTCCGCATTTGAAACAGTGCTTCGTGTTCTGCTCACTTTTCCCTAAAGATGAACTGATCATAAGAGGAGTAATAGTCAGGATGTGGATTGCACAAGGTTACGGACATGACATAATGAGATCGACGCTACCTGAAGATTTGGGAGTTGAATATTACAATGAGTTGGTGTCACGGAATCTTCTAGAGCCATACAAACGATCCTATGATCTATCAGCAAGCACAATGCATGATGTTATTCGCTCCTTTGCTCAACAGATAGTTAAAGATGAAGGACTACTTGTCAATGACAGACAAGATGTGCATGGTATTGCAGGTGCTTCAAAGCTGCGTCACTTGTCTGTATCCAAAACTGCAATAGAGCGGGTCGCTATACAAAAGCAAGTGTCATTGAGGACATTGTTGCTCTTTGGGAGATGTATAACTGAGTTGACGTATTTCAGGAACAATATCTCTTGCCTAAGAGTACTACATTTACAAGGTGTAGATCTTGTTGACCTGCCGGACTATATATGCCATCTCAAGCATCTAAGATACTTGGGGCTTGCAAATACAGGCATATCTGCAATCCCTCGAGGCATAGGAAATCTAAAATTTCTACAGTTCATTGACCTTATGGGGTGTCGGAATTTTCATCAGCTTCCTGACAGCATCTTGAAGCTACAGAATATGAGGTTTCTCGACTTCAGGGGCACGAGGTTAACCTCAATTCCTCCAGGTATGGGAAAGCTAGAAAACTTGGTGAACATGTTGGGGTTCCCAACTTATTTGGATGACAGGGGACATGCCTGGAGCAGCTTGGAAGAACTACGGTCTTTGTCGAACCTAAAATGGCTTGATTTAAGAGGTCTAGAGCTTGCATCTTCAGGCTCTATGGCTGCTACAGCAATGCTCAACAGTAAAAAGCACTTGAAAATCTTAGACTTGACATTTGCCAGTAGGCTCACCGACAACGGGATGATCGAAGGAACCAGCAATGTAATCGAGGAGCAGGAACGAGCCGAGGTTGTGTTGAGTAATCTCTGTCCTCCGCCTTGCGTAGAATGTCTTACGGTCAATGGTTACTTTGGATATCGACTACCCCGATGGATGAGAACAATGTCGGACTTTCCAAGCTTAAGGCGTTTGGAGCTGAAGGACTACGTATGCTGCAAGCAGCTGCCTGTCGGCTTGGGCCAGCTCCCTTTTCTTGATTATATTTGGATTGATCATGCTCCATCCATCGTGAGCATTGGCCATGATCTCCTCTTCCTCTCCTCCTCTAGTGCTGATGACCAGAAAGTCACAACTGGAACAAGGATCACTAGGAAGCTGCAGCTCCATGGTCTTTCTCGCGGTGATGCTGGTGTTGCATTTCCAAAGCTAGAAACACTGGGTTTAAAGGGGATGTTGGGATGGAGAGTGTAGAACTGGGATCAGCAAACACCAGGGATGCCCGCCTTAGACGTTGTTACCATCACCGGTTGTAAACTACGTTATCTTCCGCTTGGACTTGTGCACCATGCAACCGCACTAAGGGTGCTGAATCTCAGAAATGCGCCGCACCTGATCTCCGTAGAGAACTTCCCGTCACTTGTGGAGCTCACGTCAGCTGACAACCCGAAGCTGCAGAGGATCTCCAACAGTCCAAGACTGCGACATATCGTCGTTATCAGATGCCCAGGGCTGAAGGTAGTGAAGGATTTGCAATCACTTAGGAGCGTCATTTGGAAGGATTTGGATGCTGATGCCCTCCCAGAGTACCTACGAGAGACAGAGCTAAATAAGCTGGACGTGTACTGCAGTCTAAGATTGCTTAAACTCATATCCTTGCAAGATGGCAGCTATGAGTGGGAAAAGATCCAGCACGTCCAGCTACTGAAGGCATATGGGAAGAGATCAACGGAGGATAAGGTTGACCGGCACATCTTCTACACTAAGGATCCGTACTCGTTTGAAGCAGATATGGGCGAAGATCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013361