BGIOSGA013400

From RiceWiki
Revision as of 15:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013400

Description

Phosphatidylinositol-4-phosphate 5-kinase 1

Definition

Oryza sativa Indica Group BGIOSGA013400, complete gene.

LocusTag

OS03G0701800

Ensembl Transcript ID

BGIOSGA013400-TA

Ensembl Protein ID

BGIOSGA013400-PA

Length

5671

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32324033..32329703

Sequence Coding Region

32324033..32324085,32324475..32324513,32324816..32325865,32326436..32326603,32326938..32327103
,32327280..32327390,32327478..32327665,32328183..32328337,32328531..32328699
,32329424..32329703

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32324033..32329703 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32324033..32329703 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGGGCTCCACGTGGTCTCCTTCCTCGTTGTGCTACTGCTGCAGCTGAGATCTTCTGGAATGCATCTTGTGGCTTCTGAGCTATTCTGGGGTAATACCCTTCCAAATGGGGACATCTACGTGGGGAGCTTCGATGGGTTAGTCCCTCATGGACCGGGAAAGTATATGTGGACAGATGGAGCTCTTTATGATGGTGAGTGGGACAAGAGTAAAATGACCGGGAGAGGACTAATTCAGTGGCCTTCTGGTGCATCCTATGAAGGTGACTTCCGTGGAGGTTTCATTGATGGAGCAGGCACTTTCAAGGGAGTTGATGGCTCAGTTTACAAAGGTTCTTGGAGGATGAACAAGAAGCATGGTATGGGGACAATGGTTTACTCTAACTCCGACACTTATGAAGGTTTCTGGAATGAAGGTTTACCTGATGAATTTGGTAAATACACATGGGCTGATGGCAACGTATACATTGGAAGATGGAAATCAGGCAAAATGAATGGCAGCGGGGTAATGCAGTGGATAAATGGTGATACTCTTGACTGTAATTGGCTCAATGGCCTGGCTCATGGCAAAGGTTACTGCAAATATGCATCTGGGGCTTGCTACATTGGTACATGGGATAGAGGACTAAAGGATGGCCATGGTACATTTTATCAACCTGGAAGCAAAATTCCTTGTAACCTTGAAGTTTCTGACTGTCTAACAAGTCATGATGGTACAAGTGCTTCAAGTTCTAGTAATGAAAAGATCACTATTGGACTGTTATTTCTATTGCAAAAACTGTGCAAGAATTGGAGGTTGCGTAGGTTTCTTCATCGGCCCAGACGTATTTCAAATGGTACCACACCAGTTTTCGATGATAATTCTGGAAGCCATCTATGCCAAGATGTATCAAGTAAATCATTTTCAGCTGATGATCAGTGTCTACAAGACAGTGAAGTTGATAAAGATTCAGTTTATGAACGGGAATATGTACAAGGAGTGCTTATCATGGAACAACCAAAAAACGAAGATTCAAGAATGTCGGAGAGCGGTATAGCACAAGAAAATAACTGGGAGAAACAAGCTAAAGGACCAATGGAGACTATTTACAAGGGCCATAGGAGCTATTATCTAATGCTTAACTTGCAACTTGGCATCAGGTATACTGTAGGTAAAATTACCCCTGTGCCTTTGCGTGAAGTTCGTTCAAATGATTTTGGACCTCGAGCACGAATAAAAATGTACTTCCCTTGTGAGGGATCCCAGTATACCCCTCCACACTACTCTGTCGATTTCTTTTGGAAAGACTATTGTCCGATGGTCTTCCGGAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGATAGTCTAAAGGAGCTTTCTTCACCTGGGAAAAGTGGCAGCATTTTCTATCTTTCTCAAGATGAACGTTTTGTTATAAAAACATTGAGGAAAACTGAGCTGAAGATACTATTGAAGATGCTTCCAAAGTATTACAATCATGTCAAAGCTTATGATAATACACTCATTACAAAATTCTTTGGCGTGCACAGGATTACTCTGAAACCTGGAAGAAAGGTCCGTTTTGTTGTCATGGGAAATATGTTTTGTACTGAACTGCGAATTCATCGTAAGTATGACTTAAAGGGCTCTACACAAGGCCGATCAACAAAGAAGCAAAATATAAATGAGAACACAACACTAAAGGACCTTGACCTATCATATGTTTTTCACGTGGATAAACCATGGAGGGAGGCACTTTTCAGGCAGATAGCTCTTGATTGTATGTTCCTGGAATCCCAATCTATAATTGACTATAGCATGCTATTGGGAATCCATTTCCGAGCTCCCAATCACCTGAAGAGTATCACATCATGTCAGAACGCTCTTGAAACTACTGGAATGTCAGCTGAAACGGAATGTAGTGTTGCACTGCATCATGAGGAGACAATTTCTTCAAAGGGATTTCTACTAGTTGCTGCTGATGAGCCAGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTATGAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAGGTTCCGTGTTCAGCTAGGGGTGAATATGCCAGCTCGAGCTCGGAAAGTGCAAGAGGACGTGAACGTAGAAGTAGAAAACAGGGACACCATTGAAGAGTATGATGTTGTCCTATACCTTGGTATCATCGACATACTACAAGAGTATAATGTGTCCAAAAGAGTTGAGCATGCTGTCAAATCACTAAAATTCGACCCTCTTTCGATATCAGCTGTTGATCCAAATTTGTATTCGAGACGATTTATAAGTTTCTTGGAGAAGGTTTTCCCCGAGCAAGATTGA</cdnaseq>

Protein Sequence

<aaseq>MPGLHVVSFLVVLLLQLRSSGMHLVASELFWGNTLPNGDIYVGSFDGLVPHGPGKYMWTDGALYDGEWDKSKMTGRGLIQWPSGASYEGDFRGGFIDGAGTFKGVDGSVYKGSWRMNKKHGMGTMVYSNSDTYEGFWNEGLPDEFGKYTWADGNVYIGRWKSGKMNGSGVMQWINGDTLDCNWLNGLAHGKGYCKYASGACYIGTWDRGLKDGHGTFYQPGSKIPCNLEVSDCLTSHDGTSASSSSNEKITIGLLFLLQKLCKNWRLRRFLHRPRRISNGTTPVFDDNSGSHLCQDVSSKSFSADDQCLQDSEVDKDSVYEREYVQGVLIMEQPKNEDSRMSESGIAQENNWEKQAKGPMETIYKGHRSYYLMLNLQLGIRYTVGKITPVPLREVRSNDFGPRARIKMYFPCEGSQYTPPHYSVDFFWKDYCPMVFRNLREMFHIDAADYMMSICGGDSLKELSSPGKSGSIFYLSQDERFVIKTLRKTELKILLKMLPKYYNHVKAYDNTLITKFFGVHRITLKPGRKVRFVVMGNMFCTELRIHRKYDLKGSTQGRSTKKQNINENTTLKDLDLSYVFHVDKPWREALFRQIALDCMFLESQSIIDYSMLLGIHFRAPNHLKSITSCQNALETTGMSAETECSVALHHEETISSKGFLLVAADEPGPAVRGSHIRGSMVRAAEGGYEEVDLVLPGTGRFRVQLGVNMPARARKVQEDVNVEVENRDTIEEYDVVLYLGIIDILQEYNVSKRVEHAVKSLKFDPLSISAVDPNLYSRRFISFLEKVFPEQD</aaseq>

Gene Sequence

<dnaseqindica>1..53#443..481#784..1833#2404..2571#2906..3071#3248..3358#3446..3633#4151..4305#4499..4667#5392..5671#ATGCCGGGGCTCCACGTGGTCTCCTTCCTCGTTGTGCTACTGCTGCAGCTGAGGTACGTTCTTGCTTGCTTGGATTGGCGCGGTGATCTGGAAGGCCGCTTGCGCTGTAACCAGGAGTCGTTCTGGGTAGCTTGATCTGTCTTGTTGATGCGAGCTCGAGATGATGCTCTTCTGGGAGCAGCGTTTATCCGGTTTGCTTGAACAATACAAGAGGATATTTAGTTTTCTCTATTTGCTTTTTGTCACTTTGAGCTGGGCTAGTGTGATTGCAAAGTTTGCAACTGCTTTCAGTTGTACGTGGTAACGGAAATCTGCTTTGCTGAAGGCATTAGAGTTGTTATGTCTGGGATGTATTTCGATGTATCTGGGAGATTAAACCTGTTTTCGGTCAGAATTGGTTATGCTCGAATACTGGATCATAGTTTTTGCTGCCTTGTTTCAGATCTTCTGGAATGCATCTTGTGGCTTCTGAGCTATTCTGGTAAAATCTTGACATGGCCCGAGCAGAGACAAGCAAGGGGAGCATCCAGAGGTGTGATAATTCTCGTGTCTGTCTCTGCGTATTCTTCATTTTTTTTTCTTGGTAGGAATTACAAGTGCTTCATCGTGTTCTTCCCACATATTGAAAAGTACATTAAAATCAGCGCAAAGTTTGCAATCATCCACTGCCCCGACTCTCCAGCTGTCCAGCACTAATTGCGTTGCTTTACGATTGGGCAATTTAGTTTTGCAAGCACCACACAATGTAATTTGAATCTCATATATATTTTTTATTCTGGCTAGGGGTAATACCCTTCCAAATGGGGACATCTACGTGGGGAGCTTCGATGGGTTAGTCCCTCATGGACCGGGAAAGTATATGTGGACAGATGGAGCTCTTTATGATGGTGAGTGGGACAAGAGTAAAATGACCGGGAGAGGACTAATTCAGTGGCCTTCTGGTGCATCCTATGAAGGTGACTTCCGTGGAGGTTTCATTGATGGAGCAGGCACTTTCAAGGGAGTTGATGGCTCAGTTTACAAAGGTTCTTGGAGGATGAACAAGAAGCATGGTATGGGGACAATGGTTTACTCTAACTCCGACACTTATGAAGGTTTCTGGAATGAAGGTTTACCTGATGAATTTGGTAAATACACATGGGCTGATGGCAACGTATACATTGGAAGATGGAAATCAGGCAAAATGAATGGCAGCGGGGTAATGCAGTGGATAAATGGTGATACTCTTGACTGTAATTGGCTCAATGGCCTGGCTCATGGCAAAGGTTACTGCAAATATGCATCTGGGGCTTGCTACATTGGTACATGGGATAGAGGACTAAAGGATGGCCATGGTACATTTTATCAACCTGGAAGCAAAATTCCTTGTAACCTTGAAGTTTCTGACTGTCTAACAAGTCATGATGGTACAAGTGCTTCAAGTTCTAGTAATGAAAAGATCACTATTGGACTGTTATTTCTATTGCAAAAACTGTGCAAGAATTGGAGGTTGCGTAGGTTTCTTCATCGGCCCAGACGTATTTCAAATGGTACCACACCAGTTTTCGATGATAATTCTGGAAGCCATCTATGCCAAGATGTATCAAGTAAATCATTTTCAGCTGATGATCAGTGTCTACAAGACAGTGAAGTTGATAAAGATTCAGTTTATGAACGGGAATATGTACAAGGAGTGCTTATCATGGAACAACCAAAAAACGAAGATTCAAGAATGTCGGAGAGCGGTATAGCACAAGAAAATAACTGGGAGAAACAAGCTAAAGGACCAATGGAGACTATTTACAAGGGCCATAGGAGCTATTATCTAATGCTTAACTTGCAACTTGGCATCAGGTAAGCTTCATTGTATGAATGCATCATTGTTTGCTATACAAGCTTTGGAGGGTTACACTCCGTGCTTATTATATTTTCTGGTTTGTTCTGGATATATCCATTTAGGACAAGGGCACCTTCCATTTAGATCGATACATACGTGTAAAGCAAACTCTTTTTTGACAATTCAAGCATAAATTAGTGACTGAAGAATCAATAATCATTTCAGTGGGGAAAAATTAACCACCAGTTAGAATGTTCTCACTATGAGTGACAACAAAAGTAGTTTCTTCTTTCGGGAAAAAGTGCCTTCTCTTTTTGAAAAATGACATAAGTAGTTGTATTTTGATATGGAGGGAGTATGTCATAATGCATCTAGTCACGAGCCATCTGTTAATTTTTTACTAGCATGTTATTTGTCTTATCATAATAGTGATTGGATGGTATAATAGCCATATTTTATGAAAAACATCGATTACCTCATGAAATATAATTTTTTTATGTTATTTTTTATGTTTACCTCACGACATGTAACTAGTTGATGTTCTTTTTAATGATTACCCCATTTGACTATACAGTACTTCTATGCAGGTATACTGTAGGTAAAATTACCCCTGTGCCTTTGCGTGAAGTTCGTTCAAATGATTTTGGACCTCGAGCACGAATAAAAATGTACTTCCCTTGTGAGGGATCCCAGTATACCCCTCCACACTACTCTGTCGATTTCTTTTGGAAAGACTATTGTCCGATGGTCTTCCGGTATATCTCTTTCCAATCTTCTCATTGTGCGATAGTCTAGTACTTCATACTGTTCTTTTATTATATCATCTGATTGTATTACATAGGTGGTCCACGCATTCTGTACTGAACATGGGTGGTTGCTCCTCTGTGGTTCACCCCTCCCTTGTTAACTGTAGGAAATTGCAACCATGATCTTATGTATATATATGCTATCACTATCATATTTTCAGATAACACTGCAGGATGATACAGACATTGTTTAGAAATGCATCGACTTGAAAGTTCGATCAATTCTGTCAATTGTTCTTGTAATTTTCTCCATATCTTATTAGCTCATAATTTACTCTACCAGGAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGATAGTCTAAAGGAGCTTTCTTCACCTGGGAAAAGTGGCAGCATTTTCTATCTTTCTCAAGATGAACGTTTTGTTATAAAAACATTGAGGAAAACTGAGCTGAAGGTATGACCCACCCTCAGTTTTTTTCTTGCAATAACAATAGTGTTATTTGTTAATTAAAAATGACTAAAACTGAGCTTTACAAGAACAACAAAGATTTGTGCTAAAAACCGTGTATATCCTTGTTAAGTGATAAGATATGCCTACTGCAGATTGGTTTGATGTAATACGTGCTGCAGATACTATTGAAGATGCTTCCAAAGTATTACAATCATGTCAAAGCTTATGATAATACACTCATTACAAAATTCTTTGGCGTGCACAGGATTACTCTGAAACCTGGAAGAAAGGTACATTATCATATCATACTGTTGTGTTGAATGTTGTTGTCTATTTGTACACATTTGCTATATTAATTCTATGTATGGTGTTAATAGGTCCGTTTTGTTGTCATGGGAAATATGTTTTGTACTGAACTGCGAATTCATCGTAAGTATGACTTAAAGGGCTCTACACAAGGCCGATCAACAAAGAAGCAAAATATAAATGAGAACACAACACTAAAGGACCTTGACCTATCATATGTTTTTCACGTGGATAAACCATGGAGGGAGGCACTTTTCAGGCAAATTGCTACTTTCTTGCTCCTCTTTTTTCTGAACATCTTACTGTCGTCTTTCATGGTTTTGTCTATATTGGCTTGAAGTCCAGGTTCCATAACTTACCGTTTATGATGTTACTTCTGGAGATTGTGTTCACTGGGTAGTCCCTTCTGGAAAATTAAAAAGAACAGTAGATTTAAATGACTTGTGCAGATTCCTGCTTCAGTCCCATGATTGGTGGACATCAAAATTATTTTCTACTATTTTGATATTGATTCTTATCCTATTCTTGAGATCTGAAGAATACTTAAGATGGACAATTTTTATTTATACTATAGCAATAAATAGATTTTTTTAAATATAAACAACTAGATTAAAGAGGCAAACCATATTTTAAGCAGTGTCCGACCATGCATACAAGAGATTGAATTCCAGCTGTCTAGTTCAGTTTTGCATATTACTGCTCCATTTCTGCTGTGCTATTTTTCTTAACATGGTTGACGATGATATCTTGAGAGCCAACAGTTGTACTATTTTCAGGCAGATAGCTCTTGATTGTATGTTCCTGGAATCCCAATCTATAATTGACTATAGCATGCTATTGGGAATCCATTTCCGAGCTCCCAATCACCTGAAGAGTATCACATCATGTCAGAACGCTCTTGAAACTACTGGAATGTCAGCTGAAACGGAATGTACGTATAAACCTTAAGTACATCTGAGTTCTCTTTATTATATTCCTCTGAAAATTTGTCCTTTTACTAAATCTGAAGTCAGGACTACACCAGATTCTTTATATCATTACATCAACCAATTGCCTATCTTCAGCTTTTGACTTCCATTTGTTGCCTAATGGTAATATCTTAGTCTTTTTTTCACCTTAATCAGGTAGTGTTGCACTGCATCATGAGGAGACAATTTCTTCAAAGGGATTTCTACTAGTTGCTGCTGATGAGCCAGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTATGAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAGGTAGATTGACTTGTACTTAATTATTTCAAAGTTCAACTTAGCATTGGGTATATTTGTTGCTGCACAATCTGAACATGCATAGAAGAAAGAATATAAATTGCGTAGTATAGCTATCACACTCTTCAGGAAAGATTTCTTAGTATATCAGTGTGTTCTAAAGTACAAAGTACAATGAACTTGTTGGTGACTTGATCCATTATTTGATTTTTTGAACTTTTATATCAACCCTTTAGCTTTAAAATAAACATTCACAATACAACTCAACGTTGGGTGAACCATGGCAGCTCCACCAGACAACACGATAATTTTATGACTATTCAATGCAACATCTACGTTTGCAAGTTGATAGTTAAGTGTGAATTCTCGAAGCATTCATAGATGTAGAGCATATAATAGCTCGTGCATATAATATCATTTTTGTGCATGGTAAAACAAGGTCAAGTGTGCGTTCATATATTTGGAAAGAAATATCAGTAATATACATTGCCTGTCTTCTTTAGTGCACATACGGCGGTGGTTTTACACTTTTTTGCACCTGTGCCCCTGCTATACTAACTTAAACTTACCGTTGGTGCAGTTGCATATCATAAGTGCAGAAAATCCCAACCACATATTCACACGTTTTACATGCCGTCAATGTTTTTTTCTGAAACTATGGTCTGCGTGGTACTTTGTTTTCACAAAGATGCATTCTGTTTCTGACTCATTTGTTCGTTATTTTCAGGTTCCGTGTTCAGCTAGGGGTGAATATGCCAGCTCGAGCTCGGAAAGTGCAAGAGGACGTGAACGTAGAAGTAGAAAACAGGGACACCATTGAAGAGTATGATGTTGTCCTATACCTTGGTATCATCGACATACTACAAGAGTATAATGTGTCCAAAAGAGTTGAGCATGCTGTCAAATCACTAAAATTCGACCCTCTTTCGATATCAGCTGTTGATCCAAATTTGTATTCGAGACGATTTATAAGTTTCTTGGAGAAGGTTTTCCCCGAGCAAGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013400