Os07g0537500

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0537500| Description = Protein of unknown function DUF26 domain containing protein| Version = NM_001066410.1 GI:115472552 GeneID:4343479| L...")
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Gene Name

Os07g0537500

Description

Protein of unknown function DUF26 domain containing protein

Version

NM_001066410.1 GI:115472552 GeneID:4343479

Length

7324 bp

Definition

Oryza sativa Japonica Group Os07g0537500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21793463..21800786

Sequence Coding Region

21793617..21793671,21793705..21793922,21794016..21794166,21794268..21794505,21794625..21794835
,21794918..21795057,21795137..21795274,21799945..21800773

Expression

GEO Profiles:Os07g0537500

Genome Context

<gbrowseImage1> name=NC_008400:21793463..21800786 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21793463..21800786 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcatcgcgctggctgcctctcgatgctgctcaccgccgccgtcgtgctgctggcgctggcgccgcgtggcgcggcgtacccgtggcaggtgtgcggcacgacgggcaacttcacggccaacagcacgtaccaggccaacctcgacgccgtcgcggcggcgctgccccggaacatctcgtcgtcgccggacctcttcgcgaccgccatggtgggcgccgtgccggagcaggtgtcggcgctggcgctgtgccgcggggacgccaacgccacggagtgctccggctgcctcgccacggcgttccaggacgtgcagaacatgtgcgcctacgacaaggacgccgccatctactacgacccttgcatcctctactactccaacgtccccttcctctcctccgtcgacaacgccgcctcgacgagccgcgtcaacctgcagaacgtcacgtcggacccgggcaggttcaacggcatggtggcggcgctggtgaacgccaccgccgactacgccgcgcacaactccacccgccggtacgcgtccggcgaggccgtcctcgacagggagtcggagttccccaaggtgtacagctgggcgcagtgcacgccggacctgacgccggcgcagtgcggcgactgcctcgccgccatcatagccaagctgccgaggttgttcacgaaccgcatcggcggcagggttcttggagtcaggtgcagctaccggtacgaggtaaaccccttcctcaatggcctggtgatggtgcatctgactgcgccaccgattccgacagcatcaccgcccgccgctgccgcggcggcggccggagaagggaaagattacaatgttcctcgcttggttctagcaattttgctgcctactatagcagctttagtgctaatcaacattctagtttggctctgcttctggaggaggatggagaggctacgatcaggagcaactcagccatattccagcaactctgctgaatcggagaatatttcaagtgtggagtcgatgcttatcgacatttcgactttacgagctgctacagggtgttttgcagaacgcaacaagcttggcgaaggtggatttggtgcagtgtacaagggtactctgcctgatggcgatgaaatagcagtgaagagattatcgaagagttcagcacaaggagtgggagagctgaagaacgagctcgcattggttgcaaagctccagcacaagaatcttgtcaggcttgtcggtgtctgcctggagcaagaggagaggcttctcgtctatgagtttgttcccaaccgcagcctcgatcagatcctctttgacgccgacaagcgtcaacagcttgattggggaaagaggtacaagatcatcaacggcattgctcgtggcctgcaatacctccacgaggactcgcagctcaaggtagtccaccgtgatctcaaagcgagcaacatcttgctcgacatgaacatgaacccgaagatctctgactttgggctcgcgaggctcttcgggcgagaccagacgcagggggtcaccaacctcgtcatcggcacatatgggtacatgtcaccggaatatgcgatgcgaggcaactactccctcaagtccgacgtgttcagcttcggcgtcatggtgctggagatcgtgacggggaagaagaacaacgactgctacaactccctgcaatccgaagacctcttaacccttgtgtgggagcagtggacggcgagggcggtgtcggaggcggtcgacccggtgatgggcggcggtttctcgtggagcgacgtgatgcggtgcatccacatcggtctgctctgcgtgcaggagaaccctgcggatcggccggtgatgtcgtcggtggtgatgatgctcggcagcgacacggtgtcgctcagggcgccgtccaagccggcgttctgtgccagctcggggggcacgtcgtctggtacgtcgacggcggcgtcggtgcaaggcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTANST YQANLDAVAAALPRNISSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAF QDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTSRVNLQNVTSDPGRFNGMV AALVNATADYAAHNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAII AKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGLVMVHLTAPPIPTASPPAAAAAAAGE GKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNSAESENIS SVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSAQGVG ELKNELALVAKLQHKNLVRLVGVCLEQEERLLVYEFVPNRSLDQILFDADKRQQLDWG KRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQT QGVTNLVIGTYGYMSPEYAMRGNYSLKSDVFSFGVMVLEIVTGKKNNDCYNSLQSEDL LTLVWEQWTARAVSEAVDPVMGGGFSWSDVMRCIHIGLLCVQENPADRPVMSSVVMML GSDTVSLRAPSKPAFCASSGGTSSGTSTAASVQGK</aaseq>

Gene Sequence

<dnaseqindica>7116..7170#6865..7082#6621..6771#6282..6519#5952..6162#5730..5869#5513..5650#14..842#gtcagctgtgtccatggcgcatcgcgctggctgcctctcgatgctgctcaccgccgccgtcgtgctgctggcgctggcgccgcgtggcgcggcgtacccgtggcaggtgtgcggcacgacgggcaacttcacggccaacagcacgtaccaggccaacctcgacgccgtcgcggcggcgctgccccggaacatctcgtcgtcgccggacctcttcgcgaccgccatggtgggcgccgtgccggagcaggtgtcggcgctggcgctgtgccgcggggacgccaacgccacggagtgctccggctgcctcgccacggcgttccaggacgtgcagaacatgtgcgcctacgacaaggacgccgccatctactacgacccttgcatcctctactactccaacgtccccttcctctcctccgtcgacaacgccgcctcgacgagccgcgtcaacctgcagaacgtcacgtcggacccgggcaggttcaacggcatggtggcggcgctggtgaacgccaccgccgactacgccgcgcacaactccacccgccggtacgcgtccggcgaggccgtcctcgacagggagtcggagttccccaaggtgtacagctgggcgcagtgcacgccggacctgacgccggcgcagtgcggcgactgcctcgccgccatcatagccaagctgccgaggttgttcacgaaccgcatcggcggcagggttcttggagtcaggtgcagctaccggtacgaggtaaaccccttcctcaatggcctggtgatggtgcatctgactgcgccaccgattccgacagcatcaccgcccgccgctgccgcggcggcggccggagaaggtgagtcaaagcatgcttcttttttttctttttgcttactctagattttgcacgtgcgtgatggctttcaaatgattgaaacattgtttagttcatccattggtgacaaaaatgattagcgaagtcccctgaagttggtttgatgtgattgatcttccgttgattaattcaactggtagttaaccttgtgagagtcgttaacgaacactgctagcattgtggagtactatacacatataggctgcgtttgtttcagggtgttcccaacccctgttcctcgttaatagactgctccatttttcgtgcggagtagatgggttcccaaccccatgtgtcgaacacagccataatcggtaggtgatctatctgtgttgtttatttgtgggggtggtgtatagggacagtgtcatttcattttcagtatgtcagcttcagtgtatctacaaaaaaataacaataaaattaaagaatggaattcgtaggccaagtgggattagagatgcagtgcaccaagtagataagatgtcacatttgttggcatttagcccttcacaatgttcctatcatcatacagcctgtggttttgttcttcagtcagcgcctgtaggtttgctccaatacagaggcacattctgaaggcaacacactgtattggctacggcattagcagttagaagcaatgtttgtttaaagagtaaatttcacaaaactatatgtgttttgcacaatctatctatctattatataataattatataattaaagtaatagaaaaaggagccttcacgttcgctctcacggcttaggaattctcacattaatcgaaagaaaataagagaaaaaaacaaaacaccaagtgtattaggattaggtcatgcaaacggacaagaaaaattaaaagttaaaatggacagaacaaatagaaaaaaaaacaaaggatattataatgatagtgtgtaaacagataatgattctttggaatccgtatgagagaatttctgcatgcccatatcacggtaattgacttatcccttttttaattgtacacaatacatgtcatctcaataaatacatgtcctagaaaaacataaataacaaaagtaatcgcatgattttctcgccgcaaattagcacatcagtaatctttttactacaatccacttcatcagcagattaacaaacataaatcttttcatgcaatccgcttcgtcaactagcagaccgaaaatatatataatttacaaataactaaaatttgatattaaaaataattaataaataaaacatatataaaataaaatatgaatattacacatcagtagtttcgtaaagttattgcaaaatttaaaattatgttgtcattttaatatatttaaataatataatgagaaaacatatatgctattatatgagagaaaatataatgatgctagccgcgcaatctgcgcgggccaccatgctagttaacttattaaaggaatagaaaaaggagcctccacgttcgctctcacggcatagaaattctcatattaatcggagaaaaagaaaaacaaagtccatatagaaatacaatttataaataactgaaattcggaattaaaaagtaaggaatattagaagtagagtatagagtccatatagaaatacaattatgaaataatagaaattcggaattaaaaataaggaatattagaagtagagtatagagtccatacagaaatacaattaggaaataatataaattcggaattaaaaataataaatattagaagtagagtatagagtccatataggaatttaaaactaactaaaattcggaataaacataataaaattaaaagtagagtttagagtccatataaaaatacaatttacaaataactaaaattcaaaattaaaaaaaaacatgggaagaagattctaaagtcaatatagggatataatttagaagtaactgaaattcgaaattaaaaattaaagaatattgaaagatgagtttagagtccacatagaaatgcaattagaaataacaaaaattcagaattaaaaataaaaaaatattggaagaagagcctagagtctacatagaaatacaatttacatataacgaaaattcagaatttaaaaaatattaagaataattaataactatacagaacaaatagaaaaaaaaacaaaggatattataatgatagtgtgtaaacagataatgattctttggaatccgtatgagagaatttctgcatgcccatatcacggtaattgacttatcccttttttaattgtacacaatacatgtcatctcaataaatacatgtcctagaaaaacataaataacaaaagtaatcgcatgattttctcgccgcaaattagcacatcagtaatctttttactacaatccacttcatcagcagattaacaaacataaatcttttcatgcaatccgcttcgtcaactagcagaccgaaaatatatataatttacaaataactaaaatttgatattaaaaataattaataactaaaacatatataaaataaaatatgaatattacacatcagtagtttcgtaaagttattgcaaaatttaaaattatgttgtcattttaatatatttgaataatataatgagaaaacatatatgctattatatgagagaaaatataatgatgctagccgcgcaatctgcgcgggccaccatgctagttaacttattaaaggaatagaaaaaggagcctccacgttcgctctcacggcatagaaattctcatattaatcggagaaaaagaaaaacaaagtccatatagaaatacaatttataaataactgaaattcggaattaaaaagtaaggaatattagaagtagagtatagagtccatatagaaatacaattatgaaataatagaaattcggaattaaaaataaggaatattagaagtagagtatagagtccatacagaaatacaattaggaaataatataaattcggaattaaaaataataaatattagaagtagagtatagagtccatataggaatttaaaactaactaaaattcggaataaacataataaaattaaaagtagagtttagagtccatataaaaatacaatttacaaataactaaaattcaaaattaaaaaaaaacatgggaagaagattctaaagtcaatatagggatataatttagaagtaactgaaattcgaaattaaaaattaaagaatattgaaagatgagtttagagtccacatagaaatgcaattagaaataacaaaaattcagaattaaaaataaaaaaatattggaagaagagcctagagtctacatagaaatacaatttacagataacgaaaattcagaatttaaaaaatattaagaataattaataactatcacgtatataaaatacaatatgaatattacacattagtagtttcgtaaagttagtacaaaatttaaaattatgttgtcattttaatatatttgaataatacattaagaaaacatatatgctattatatgagagaaaatataataatgctagccacgtaatctgcgcgagccaccatgctagtttatcataaaactaaatatttaagagcttgtttcacaaaactaaagatttagtgtctccgtttatcacaaaactacaagtactttgtacaatagatcacaaaactacagatttaagaatttgtttcataaaactatagatttagtgtattcgtttatcacagaactacacatttagtgtctttatttatcacaaaactacaaatttagtgttttaaaacctatagttttgtgataatggagacactaaacctgtagttttgtgataaatgaagatattaaatctgtagttttgtaaagcaagttcttaaatatgtagttttataatatattgtgtaaagtacatgtagttttgtgataaacgaagacattgaatctgtatttttgtgaaacaagttcttaatctgtagttttgtgataaatcgtgcaaagtatctgtagttttacgaaagagtgaattgcattggcggtacacgaatttgtcaggtgggtgcaatctagtgcatgaacttataaaatgctcatgttggtgcatgaacttgtctagtgcgtccggaggaaggcgaaaaggacattatatatatagctaatcttattgatttaggggctaattaggatattatgtaaacatatatctgagaaggttgctattagacatacacctcttcaataaaaaaaatagaatatgatatagtgatagtagaaaaagatgaaaaaaaccaagcaaatgatattttggtcctcgttcgcacgaaatagacaagtttgtgtactgaaatgaggattttacaagtttatgtaataaattgtacccacctaacaagtttgtgtaccaccaatacaatttactctttacgaaatttactcttgtttaaatgatcttgacagaataaaaaaatattttttccttcagttttctgaatatacatgacaagaatatggcaaatgagattgaaaatgactgaaaggcgatgttggtacttgcctattagcttctggcagctcttgcacgttgcttgcgtaatgctattgattatgtgtttagttgcaacttactcatttgatctgaaattagtctacatctgtcaattcacagggaaagattacaatgttcctcgcttggttctagcaattttgctgcctactatagcagctttagtgctaatcaacattctagtttggctctgcttctggaggaggatggagaggctacgatcaggagcaactcagccatgtatgccctgcaaaatttttcaaggagaatttgaaacaaattaagttgttagcttacattggcatttatacttgaacagattccagcaactctgctgaatcggagaatatttcaagtgtggagtcgatgcttatcgacatttcgactttacgagctgctacagggtgttttgcagaacgcaacaagcttggcgaaggtggatttggtgcagtgtacaaggtgctgactctaacataactgaagaaagtatcactaaaaatatattcattactaagtgttactattgatttggtctgaacagggtactctgcctgatggcgatgaaatagcagtgaagagattatcgaagagttcagcacaaggagtgggagagctgaagaacgagctcgcattggttgcaaagctccagcacaagaatcttgtcaggcttgtcggtgtctgcctggagcaagaggagaggcttctcgtctatgagtttgttcccaaccgcagcctcgatcagatcctctttggtaccaccaaacttactaatccactcaattttagctaaatatcttcaccattttctctgcaaagttcaataacatcaagctgatcattcactctcaacatgtttttttatcaatatcagacgccgacaagcgtcaacagcttgattggggaaagaggtacaagatcatcaacggcattgctcgtggcctgcaatacctccacgaggactcgcagctcaaggtagtccaccgtgatctcaaagcgagcaacatcttgctcgacatgaacatgaacccgaagatctctgactttgggctcgcgaggctcttcgggcgagaccagacgcagggggtcaccaacctcgtcatcggcacatagtcagtggcagtaacccaaatacagagaacataacaatttgttgaaagctgttgcttggatggtcagttaatgaatagtactttacgctgttgtatttcagtgggtacatgtcaccggaatatgcgatgcgaggcaactactccctcaagtccgacgtgttcagcttcggcgtcatggtgctggagatcgtgacggggaagaagaacaacgactgctacaactccctgcaatccgaagacctcttaacccttgtgagcactaaccatatgatcctactcgtctgttcatggaaaaatgaggtgattgcttagctaaaattgactggattactcgtttttgtgcaggtgtgggagcagtggacggcgagggcggtgtcggaggcggtcgacccggtgatgggcggcggtttctcgtggagcgacgtgatgcggtgcatccacatcggtctgctctgcgtgcaggagaaccctgcggatcggccggtgatgtcgtcggtggtgatgatgctcggcagcgacacggtgtcgctcagggcgccgtccaagccggcgttctgtgccaggaggaacggcggcaccggcggtgccggtgccagctcggggggcacgtcgtctggtacgtcgacggcggcgtcggtgcaaggcaagtaactgtagaagtgtgcaacggtgaaactgtgctcgctgtgtgggatctgccattccgctgaagcattctttgccaggttaggttaggctttcataagtatataacgcaatgtaccagactgattaccaaaagaatcaaagacagcaaaatatactg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0537500, RefSeq:Os07g0537500