Os07g0538200

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0538200| Description = Protein of unknown function DUF26 domain containing protein| Version = NM_001066414.1 GI:115472560 GeneID:4343483| L...")
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Gene Name

Os07g0538200

Description

Protein of unknown function DUF26 domain containing protein

Version

NM_001066414.1 GI:115472560 GeneID:4343483

Length

3342 bp

Definition

Oryza sativa Japonica Group Os07g0538200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21815613..21818954

Sequence Coding Region

21815752..21816024,21816139..21816292,21816384..21816621,21816745..21816955,21817040..21817179
,21817274..21817402,21817857..21818811

Expression

GEO Profiles:Os07g0538200

Genome Context

<gbrowseImage1> name=NC_008400:21815613..21818954 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21815613..21818954 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgtctctgtctctctgccgtgttggacggagattactcactactatagtccatccccgtgggaacgaacatggattgagctcctctttgcgcacgccggaaataccccgatggatcgccgtctcatcctgtccgtcgccgtcgccgtcgcgctgctcgcgccccgcgctgccggcgagccatggccggtgtgcgggcaggacttcggcaccttcacgcccaagagcaggttcttcgccaacctccagctcatcgccgccacgctccccggtaacgcctcgtcgtcgccggacctctacgccaccgccgtggacgttggcgccgtcccggagcaggtcaccgccgccgcgctctgccgcggcgacgtcagcgccagctcctgcctcggctgcctcacccaggccttcgccgacctgcccaacgcgtgcggcaactccagggaggccgccacctactacgaccggtgcatggtcagctactccgccatcaacttcctctccggcggcgccggcggcgaagacccggcgaggatcgacgcgtacacggtgaacaacgagaacaaggtcacgtcggagcaggggcggtacaaccgcctcgtggcggcgctcgtcaacgccaccgccgactacgcggcgtacaactcgacgcggcggtacgcggccggcgaggccgacttcgacgcggcgctccccaaggtgtacagcctggcgcagtgcacgccggacctgtcgccggcgaggtgccggagctgcctcgccaagatcgtggcgcaggagctttggtcgtacaaggacgacatcggagggaggaccctctccgtcaggtgcagcttccggatcgagaccaagcctttcctcaatggcacgacgatggtgcggctaccggcgacatcggcgccgtctccggcgccgccggtcaacgcgacgccttcagcggccacgccgggacgagagacaaagtacaaggttccgcgcctggttcttataatactgctccctataatagcagccgtaaaccttgtcgtttgcttctgtgtctggaggaggaagcgtccagtaataacaaaagcaaagcagacaaatgccaactattacgctgaagcagatgacgttgacagcgtagactccatgctcatggacatttctactctgcgagctgcaactggggattttgcagagagcaacaagcttggtgaaggtggatttggagcggtgtacaagggtgttcttccagacggcaacgaaatcgcagtgaagaggctgtcaaagagctcaacacagggagttcaagagctgaagaatgagcttgctctggtcgccaagctgaggcacaagaacctcgtaagctttgtaggcgtctgcctggatcaacacgagaggctgcttgtctacgagttcgttcctaaccggagccttgacctgatcctctttgacactgagaaacgcgagaagcttgactgggaaaagaggtacaggatcataaacggcgtcgctcgaggcctgcaatacctccacgaagactctcagctcaaggtagtccaccgtgatctgaaggcgagcaacatcttgctagacgcgaacatgaaccccaagatctcaaactttggcctcgcgagaattttcggtcaagatcagacccaggctgtcacgaaccgtgtcgtcgacacatatgggtacatggcacctgagtacatgatgcgtggcaactactccgtcaagtcagacgcgttcagcttcggcgtcatggtgctggagatcgtgacgggaaggaagaacaacgacttctacaacaactctcaccaatctgaagatctcctgaacacgatatgggagcgttggatggccggaaccgtggatgagatggtagacccggccatgagcaggtacgtctcggcgagcgacgtgcggaagtgcgtccacgtagcgctcctgtgcgtgcaggaaaaccccgcggatcggccggtgatgtcgtcggtggtgatgatgctcgacagcgagacggtctccctccaggtgccctccaagccggcgttcttcgccaggaacggcggcgctaaacccggcgtcgcgtccgacgagtcgaccgcgtcagtgtag</cdnaseq>

Protein Sequence

<aaseq>MVVSVSLPCWTEITHYYSPSPWERTWIELLFAHAGNTPMDRRLI LSVAVAVALLAPRAAGEPWPVCGQDFGTFTPKSRFFANLQLIAATLPGNASSSPDLYA TAVDVGAVPEQVTAAALCRGDVSASSCLGCLTQAFADLPNACGNSREAATYYDRCMVS YSAINFLSGGAGGEDPARIDAYTVNNENKVTSEQGRYNRLVAALVNATADYAAYNSTR RYAAGEADFDAALPKVYSLAQCTPDLSPARCRSCLAKIVAQELWSYKDDIGGRTLSVR CSFRIETKPFLNGTTMVRLPATSAPSPAPPVNATPSAATPGRETKYKVPRLVLIILLP IIAAVNLVVCFCVWRRKRPVITKAKQTNANYYAEADDVDSVDSMLMDISTLRAATGDF AESNKLGEGGFGAVYKGVLPDGNEIAVKRLSKSSTQGVQELKNELALVAKLRHKNLVS FVGVCLDQHERLLVYEFVPNRSLDLILFDTEKREKLDWEKRYRIINGVARGLQYLHED SQLKVVHRDLKASNILLDANMNPKISNFGLARIFGQDQTQAVTNRVVDTYGYMAPEYM MRGNYSVKSDAFSFGVMVLEIVTGRKNNDFYNNSHQSEDLLNTIWERWMAGTVDEMVD PAMSRYVSASDVRKCVHVALLCVQENPADRPVMSSVVMMLDSETVSLQVPSKPAFFAR NGGAKPGVASDESTASV</aaseq>

Gene Sequence

<dnaseqindica>2931..3203#2663..2816#2334..2571#2000..2210#1776..1915#1553..1681#144..1098#atattcaaattcactgctaaaccggtatcttggttgtactagtgtgtgcaaggagacatggattttctatatctcgactagctggatgcaatcgtatccattgttaagcgacaaagttggttcaagaatcagggacgacttgtatggtcgtctctgtctctctgccgtgttggacggagattactcactactatagtccatccccgtgggaacgaacatggattgagctcctctttgcgcacgccggaaataccccgatggatcgccgtctcatcctgtccgtcgccgtcgccgtcgcgctgctcgcgccccgcgctgccggcgagccatggccggtgtgcgggcaggacttcggcaccttcacgcccaagagcaggttcttcgccaacctccagctcatcgccgccacgctccccggtaacgcctcgtcgtcgccggacctctacgccaccgccgtggacgttggcgccgtcccggagcaggtcaccgccgccgcgctctgccgcggcgacgtcagcgccagctcctgcctcggctgcctcacccaggccttcgccgacctgcccaacgcgtgcggcaactccagggaggccgccacctactacgaccggtgcatggtcagctactccgccatcaacttcctctccggcggcgccggcggcgaagacccggcgaggatcgacgcgtacacggtgaacaacgagaacaaggtcacgtcggagcaggggcggtacaaccgcctcgtggcggcgctcgtcaacgccaccgccgactacgcggcgtacaactcgacgcggcggtacgcggccggcgaggccgacttcgacgcggcgctccccaaggtgtacagcctggcgcagtgcacgccggacctgtcgccggcgaggtgccggagctgcctcgccaagatcgtggcgcaggagctttggtcgtacaaggacgacatcggagggaggaccctctccgtcaggtgcagcttccggatcgagaccaagcctttcctcaatggcacgacgatggtgcggctaccggcgacatcggcgccgtctccggcgccgccggtcaacgcgacgccttcagcggccacgccgggacgaggtgagtcgaagtgtgtattactttcgggcggcattactgacattattgcacaattagtcaactacacgtttattatttccaagaaaacccggcaaaaattatttccaagaaaaagctatattttaagtcatttaatttttttctgagtacttgtaggttgtaagtcatttctattatctaaaatgattatttaggtttgatcacgtttgtagaaaaatttagcaacattaacattgaatatattttagtaatatgtttgttctatattgaaaatattaatatattttttttatatattttgttaaatttaaaggaatttgactaagaaaaaattaaacgacttgcagcatgaaataaggggagtagtacagtacagtagtacggaatctgtccatacaattcgacatgttttaacatgataaccttggaaatttgtgaattggtcaattcgcagagacaaagtacaaggttccgcgcctggttcttataatactgctccctataatagcagccgtaaaccttgtcgtttgcttctgtgtctggaggaggaagcgtccagtaataacaaaagcaaagcagacaagtacgtcctacaaaattctccattttaatcatttcagctgacaatgcaaaaaaaaaaaacttatccaattgttgtgatgctgacgtttatgcagatgccaactattacgctgaagcagatgacgttgacagcgtagactccatgctcatggacatttctactctgcgagctgcaactggggattttgcagagagcaacaagcttggtgaaggtggatttggagcggtgtacaaggtactgaaaaagggaaaaaaaaaacaagtctctgaattacaaaccaaaactaatttaattagcatattttgaatcttttcacagggtgttcttccagacggcaacgaaatcgcagtgaagaggctgtcaaagagctcaacacagggagttcaagagctgaagaatgagcttgctctggtcgccaagctgaggcacaagaacctcgtaagctttgtaggcgtctgcctggatcaacacgagaggctgcttgtctacgagttcgttcctaaccggagccttgacctgatcctctttggtaacaatactactactaattgagtctacattaccaattctctcctctgttttctctgcaaagattgatgtcatatcatcgcattgatctattaattaacaccttctctttgatcattgtcagacactgagaaacgcgagaagcttgactgggaaaagaggtacaggatcataaacggcgtcgctcgaggcctgcaatacctccacgaagactctcagctcaaggtagtccaccgtgatctgaaggcgagcaacatcttgctagacgcgaacatgaaccccaagatctcaaactttggcctcgcgagaattttcggtcaagatcagacccaggctgtcacgaaccgtgtcgtcgacacatagttagtaacaacataaactgtagtagttgttcagtcatccagtaattaagtagtgactaatcatgacttcaaattatctttgctgttgcagtgggtacatggcacctgagtacatgatgcgtggcaactactccgtcaagtcagacgcgttcagcttcggcgtcatggtgctggagatcgtgacgggaaggaagaacaacgacttctacaacaactctcaccaatctgaagatctcctgaacacggtgaacatacaacatagtagttcatatctctgaacatctgataacctgcactctgcagattacagtgcagtttggctgatctatgtgtgatgctgcactacaaaaatgatgcagatatgggagcgttggatggccggaaccgtggatgagatggtagacccggccatgagcaggtacgtctcggcgagcgacgtgcggaagtgcgtccacgtagcgctcctgtgcgtgcaggaaaaccccgcggatcggccggtgatgtcgtcggtggtgatgatgctcgacagcgagacggtctccctccaggtgccctccaagccggcgttcttcgccaggaacggcggcgctaaacccggcgtcgcgtccgacgagtcgaccgcgtcagtgtagaacctgtcatagagagagcttcgatcggtccaggatatggaacttcttgcgctgctgattagtggctcccactctgaaaggaggattgtgctactgtacggacaatgtaagaatcatgaaaagtttgcacaatttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0538200, RefSeq:Os07g0538200