BGIOSGA013572
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA013572 |
|---|---|
| Description |
Putative topoisomerase VI subunit APutative |
| Definition |
Oryza sativa Indica Group BGIOSGA013572, complete gene. |
| LocusTag |
SPO11-1 |
| Ensembl Transcript ID |
BGIOSGA013572-TA |
| Ensembl Protein ID |
BGIOSGA013572-PA |
| Length |
3710 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:35215500..35219209 |
| Sequence Coding Region |
35215500..35215599,35215694..35215805,35215883..35215959,35216046..35216147,35216242..35216315 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:35215500..35219209 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:35215500..35219209 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGGGAGGGAGAAGAGGCGGCGGGTGGCGGCGCTCGACGGCGAAGAGCGGCGGCGGCGGCAGGAGGAAGCGGCGACCCTCCTCCACAGGATCAGAGGGTTGGTGCGCTGGGTCGTCGCCGAGGTCGCCGCCGGCCGCTCCCCGACCGTCGCGCTCCACCGCTACCAGAACTACTGCTCCTCCGCCTCCGCCGCCGCCGCGTCCCCATGCGCCTGCAGCTACGACGTCCCCGTGGGCACAGATGTACTCTCGCTCCTCCACCGGGGCTCCCACGCCTCCCGGCTCAATGTGCTCCTCAGGGTTCTTCTCGTCGTGCAGCAACTCCTGCAGCAGAACAAGCACTGCTCCAAGAGGGACATCTACTACATGTACCCCTCCATATTCCAAGAACAAGCGGTTGTTGACCGTGCAATCAATGATATATGCGTACTCTTCAAGTGCAGCCGGCACAATCTCAATGTGGTTCCTGTGGCAAAAGGCTTGGTGATGGGCTGGATTAGATTTTTAGAGGGAGAAAAGGAAGTCTATTGTGTAACGAATGTCAATGCTGCCTTCTCTATCCCAGTTAGCATCGAAGCAATAAAAGATGTTGTTAGTGTTGCGGACTACATACTTATTGTCGAGAAGGAGACAGTGTTTCAACGTTTGGCTAATGACAAGTTCTGTGAAAGGAATCGCTGCATTGTGATTACAGGAAGAGGCTACCCAGATATTCCAACAAGAAGATTCTTGCGCTACCTTGTTGAACAGCTGCATTTGCCAGTTTACTGTTTGGTGGATGCAGACCCTTATGGTTTCGACATTCTGGCTACCTACAAATTTGGTTCACTGCAATTGGCATACGATGCAAATTTCCTGCGTGTGCCTGATATTCGGTGGCTTGGGGTCTTCACATCTGATTTTGAGGATTATCGCCTTCCAGACTGCTGCCTACTTCACTTGTCGTCTGAAGACAGAAGGAAAGCTGAAGGAATTCTCTCAAGGTGTTACTTGCACAGGGAAGCCCCACAATGGAGGTTGGAGTTAGAAGCCATGTTGCAAAAGGGTGTCAAATTTGAGATTGAGGCGTTATCTGCATGTTCCATTTCCTTTTTATCAGAAGAGTACATTCCCAAGAAGATCAAACAAGGAAGACATATATAA</cdnaseq> |
| Protein Sequence |
<aaseq>MAGREKRRRVAALDGEERRRRQEEAATLLHRIRGLVRWVVAEVAAGRSPTVALHRYQNYCSSASAAAASPCACSYDVPVGTDVLSLLHRGSHASRLNVLLRVLLVVQQLLQQNKHCSKRDIYYMYPSIFQEQAVVDRAINDICVLFKCSRHNLNVVPVAKGLVMGWIRFLEGEKEVYCVTNVNAAFSIPVSIEAIKDVVSVADYILIVEKETVFQRLANDKFCERNRCIVITGRGYPDIPTRRFLRYLVEQLHLPVYCLVDADPYGFDILATYKFGSLQLAYDANFLRVPDIRWLGVFTSDFEDYRLPDCCLLHLSSEDRRKAEGILSRCYLHREAPQWRLELEAMLQKGVKFEIEALSACSISFLSEEYIPKKIKQGRHI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..100#195..306#384..460#547..648#743..816#1051..1067#1357..1426#1514..1550#2026..2073#2166..2224#2314..2345#2423..2528#2920..3040#3159..3222#3584..3710#ATGGCGGGGAGGGAGAAGAGGCGGCGGGTGGCGGCGCTCGACGGCGAAGAGCGGCGGCGGCGGCAGGAGGAAGCGGCGACCCTCCTCCACAGGATCAGAGGTGCACTCCCCCTCCCTCTCGTGATCAATCGCTTAAAAAACTTCTGAATCCTTCATCAACCGAAGTAAACACGCGTCCCTCGTTTTTTGCGCAGGGTTGGTGCGCTGGGTCGTCGCCGAGGTCGCCGCCGGCCGCTCCCCGACCGTCGCGCTCCACCGCTACCAGAACTACTGCTCCTCCGCCTCCGCCGCCGCCGCGTCCCCATGGTCGGTTTCCGCGTCTCGCCCTACCCTACCATCTCATCGGCCGTTTCAAATTCTCACCCCGCTGTATGCGCTTGCAGCGCCTGCAGCTACGACGTCCCCGTGGGCACAGATGTACTCTCGCTCCTCCACCGGGGCTCCCACGCCTCCCGGCTCAGTACGCGTCGTTGATTTTTGTCTCAACCTGCGTATCTACGATCATGTTAATGTTAATCAGTTTGGGATGTTTTAATCGATGTGCAGATGTGCTCCTCAGGGTTCTTCTCGTCGTGCAGCAACTCCTGCAGCAGAACAAGCACTGCTCCAAGAGGGACATCTACTACATGTACCCCTCCATATTCCAAGGTCTGCATAGGTTCCATGCCTCCGCTTCTGCTTTTGTTTCCTGCTGTGTGTGACAATTGGAATTCTGACACCTGTTTTTGTCTAAATACTGCAGAACAAGCGGTTGTTGACCGTGCAATCAATGATATATGCGTACTCTTCAAGTGCAGCCGGCACAATCTCAATGTGGTATGTACCGCGTAATCTGTGTTATTTTCCTTCAGAATCTTCAGTTTTGCTTCTAGAAGTTGCGTGTGCATCACATAATAAGATTCCACTTTCCAGCTGCTACATCCTTTGTGCCCACATTTCTGTCATTAATCACCTGGAGCCTTTTTTTTCTCAATGCTGTTTTACATCTTGAATTCATGTGTATGTACTGTCATAACTGACTGGAATGTGTGCTACCTTGGCTGCTTGCAGGTTCCTGTGGCAAAAGGGTAGGAACTCTGTCAACTATCATAGAGTTGGAGTGTCTGAAGATATGTTTAACTCATTCTACTGTCCTATTGATTGTCCATGCCAATACTTAATAAGATAACTTCTAACCCCTTATCTTCCAAGCACTTGGTCTGCTTAAAACAAAATCTGGATGTAAATAGTGAGATGCTTCTCTTTTAGCAAGGGCTTATAGAGCACTGTGAAGCTACCATTACAGTGCTATGCTCATATATTCTTCACCTATTCATTTCCCCTGTTAAAAACTCATCAATGTCTTTATTATTCCAGCTTGGTGATGGGCTGGATTAGATTTTTAGAGGGAGAAAAGGAAGTCTATTGTGTAACGAATGTCAATGCTGTAAGTTCTATGAGTTTCCTTTAATCACTGTAATATGTTTCTTTCTTTTTATTGATATGGTTTGATTTTTGCCTTCTTCAAATGCAGGCCTTCTCTATCCCAGTTAGCATCGAAGCAATAAAAGGTTGTTCAGAAATTTAAAGATCTAAAATTCAGTATTTATGTTACTGTTAATCTGCACTGAAAATAATTCCTTTACAATTTGCTGACATGGATTGCGTGAGGGGTTGGACCATAATCTCAATTATTCAGAATTAGCCACCATCCTTTGTTTTGAGAGAATCCACTTTGATATATTCTGAATCGAATAGCTAGGATTGATCTCTTAGCAAGGTGCTGTTCATTAGACTAAAGAATAAAGTCAGTGCTTAGTATCTTTACCCGTCTTGATTTAAGATATGCCAGAAAAAGACTGGACAACAAGTGAACCCACAGTTTATTCTTCATTTTCCTTACAAATATGCGGTTGATTATACTTATATCTTTTACTCACTTTATGTTACAGATTTCCTCTCTTGTTATCTGTGAACTTCAGTGTTATCCCTGATGCCTGAATTATATCTCAAGGAAATTAAGCTATCTTAGGTTTTCTCTTGTAGATGTTGTTAGTGTTGCGGACTACATACTTATTGTCGAGAAGGAGACAGGTATGAGGCTTAAAGATTCCTCATGTGCATGTGATACTTGTACTCTTCCAGTTCCAGCCTTCCTACAGTTCGCTTCTGTACTCTCCTTGCAGTGTTTCAACGTTTGGCTAATGACAAGTTCTGTGAAAGGAATCGCTGCATTGTGATTACAGTACTTACTAACTGCTGAATCTGGTGTTATACACAAAATATCTTCTTGCATTTATTCTTATCTAGTTTGATGTTGTTCTGTCTGCTCAGGGAAGAGGCTACCCAGATATTCCAACAAGAAGGCATATACTCTTTGTTATACTTTTCTCTTTTATTTTTCTGAATTGATATTTCAAATGTAAATACTTTATTTTTCCAGATTCTTGCGCTACCTTGTTGAACAGCTGCATTTGCCAGTTTACTGTTTGGTGGATGCAGACCCTTATGGTTTCGACATTCTGGCTACCTACAAATTTGGTTCACTGGTGGGTCATGATTTATCTAATTAGCTGTTTGCTTTGTATTTGCTATTATGCACTATCTGAGCATACCTGTTAATTAAAAATCACATATAACCACTTTATGCAAATGACTACTACACTTTCCTTATCAGTAGCTCCCAATAGCTGGATTGACCTTTATGCATTACATTTTTGTCCAGTATCAAGGCACATTTGAATCAAACAGTATGCCTTCAGTTTGTTTGGCAGCTCTAAGCCCTTTTAGCATGTCTTGTTTTCACGATATTCTGTCCCATTTTGCTGGTAGATTTGGACCTTGCAAGTTTATTTAATTTTCCTTGAAAGCTTGGTGTATTTATTTGTGTTAACTAACTACCTTCTGCAATGCGCTTGTGTAATTCTCATTCTATTTAAGCAATTGGCATACGATGCAAATTTCCTGCGTGTGCCTGATATTCGGTGGCTTGGGGTCTTCACATCTGATTTTGAGGATTATCGCCTTCCAGACTGCTGCCTACTTCACTTGTCGTCTGAAGGTGACTAAACTGAGGGATATAAATGACTGACATTTCTACAACTTTTTCTTGGAACTTATAAGTACCTTGTTTGTTCTTATTCAATTGTCAACCTCATGCTTCATGTATTCTGTTGCAGACAGAAGGAAAGCTGAAGGAATTCTCTCAAGGTGTTACTTGCACAGGGAAGCCCCACAATGGAGGTAAGGTTGTACTTTTCGTACCCGTATTACAAGCAATTCATGATTATGATGGGAGTTTACAAGTTAGAGCTCGGACTTAGCTAGTGGAACATTTCTTTGCTTTTGTTTTAACAGTAGTTAAAGTCATTTTTTTGAAGACTTTCTTATGAAAAACAGGCCAGCTTACTAATAAAAGCTGTACTCCTAACTTAGTGCCTTCCCTTCAGTCTCATTTCCTTAGTTTGAAAAACTCCACTACGCCCAGTAGGTGCAAGTTTTGGGGATGAATTTTAGTGTACCACTTGCCTAGGAAGACTTGGCCCATTTTATTTCCAGTAACTTTAGCCCTGAATTTTTTACACTGATATACTTTATTTGGCAGGTTGGAGTTAGAAGCCATGTTGCAAAAGGGTGTCAAATTTGAGATTGAGGCGTTATCTGCATGTTCCATTTCCTTTTTATCAGAAGAGTACATTCCCAAGAAGATCAAACAAGGAAGACATATATAA</dnaseqindica> |
| External Link(s) |
