Os07g0540800

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0540800| Description = Similar to KI domain interacting kinase 1| Version = NM_001066428.2 GI:297607394 GeneID:4343497| Length = 3572 bp| ...")
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Gene Name

Os07g0540800

Description

Similar to KI domain interacting kinase 1

Version

NM_001066428.2 GI:297607394 GeneID:4343497

Length

3572 bp

Definition

Oryza sativa Japonica Group Os07g0540800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22013239..22016810

Sequence Coding Region

22013239..22013544,22013626..22013776,22013888..22014125,22014466..22014676,22014755..22014870
,22015125..22015256,22015916..22016810

Expression

GEO Profiles:Os07g0540800

Genome Context

<gbrowseImage1> name=NC_008400:22013239..22016810 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22013239..22016810 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgcggccgcggcggcgcaccacctcgccggcgtcgccgcagccttcctcctcgccgtcctcctccacgtccacctcgccgccggtgaagacgaacctccaccgtggtacctgtgcgacccctacagcgcgagcggccgctactcggagaacagcacgttccaggccaacgtcaaccgcctctccgccaccctccccaggaacacctcctcgtctccggccatgtacgccacgggcgccgccggcgacgtcccggacaaggtgtacggctacgcgctctgccgcggcgacgtcgccgacgcccacgcctgcgagcgctgcgtcgcggccgccctccgcgacgcgccgcgggtgtgcccgctcgtcaaggacgcgctcgtcttccacgacctctgccagctccgctactccaaccgcaacttcctcctcgacgacgactactacgtcgccacgtactcgctccagcgctcctcccgcctcgtgagcgcgccggcgccggcggcggtggcggcgttcgacgcggccgtggccatgctcgccaacgccaccgcggagtacgccgcggcggcgaacacgtcgaggcggtacggcacggcggaggaggagggcgtcgacggcgacggcgacagcggccgccccaggatgtacgcgctggcgcagtgcacgccggacaaggcggcggacgtctgccgggcctgcctcacgacgctgaccaccgtgcagctgcccaagctctacagcggcgggaggacgggaggtggggtgttcggggtgtggtgcaacctccggtacgaggtgttccctttcttctccggccgcccgctgctgcatcttccggcgttcgtggaggcgccgccgccagcgacgtcggcggcggcgaccagaagaggagagaaaaagaggaataagacaggtatagttctagccattgttatgcctacaattgctgcaatgctgctcatcgtcgtagcatacttttgttgttggaggaggagacgaccagaagaacagacgtttctgccctacgatattcaaagtattgattcgcttctactcgatctatcaacactacgagctgctacagatgattttgctgaaactaaaatgatcggcagaggagggttcggtatggtttacaagggagtcctgcctgaaggtcaagaagtagctgtgaaaagactttgtcagagttccggacaaggaatagaagagcttaaaagtgagctagttttagttgctaagctttaccacaagaatcttgtaaggcttattggtgtttgcttggaacagcaagagaaaatacttgtctatgaatatatgtcaaataaaagccttgataccattcttttcgatatagacaaaaacatagagctagattggggcaaaaggttcaagattataaatggaattgctcaaggcttgcaataccttcacgaagattctcgattgaagatagtgcaccgagacctcaaagcaagcaacattctattagactttgattacaaccctaagatttctgattttggcttggcgaagatatttgatggggatcaatcaaaagatatcactcatcgaattgccggaacatatggatacatggcgcctgaatacgccatgcatggtcattattcagtcaagttggacgtatttagtttcggcgttttggtactagagatcgtcactggaagaagaaatagtggctcatatgatagcgggcaagatcttgatctcttaaaccatgtgtgggggcactggaccaggggaaatgttgtagagttgattgatccatccttgggcaaccatcctccgatcgagcagatgttgaagtgcatccacatcgggctgttgtgtgttcagaaaagacctgcaagcaggccgacgatttcgtcagtaaacatcatgcttagcagcaacactgttcgtctcccttctctatccaggccggctttctgcatccaggatgttagtgccagtgacagctctaatccgcattcaacagcggtgtcttcgaatgatatgtcaatcacagatcttgtgccgagatga</cdnaseq>

Protein Sequence

<aaseq>MPAAAAAHHLAGVAAAFLLAVLLHVHLAAGEDEPPPWYLCDPYS ASGRYSENSTFQANVNRLSATLPRNTSSSPAMYATGAAGDVPDKVYGYALCRGDVADA HACERCVAAALRDAPRVCPLVKDALVFHDLCQLRYSNRNFLLDDDYYVATYSLQRSSR LVSAPAPAAVAAFDAAVAMLANATAEYAAAANTSRRYGTAEEEGVDGDGDSGRPRMYA LAQCTPDKAADVCRACLTTLTTVQLPKLYSGGRTGGGVFGVWCNLRYEVFPFFSGRPL LHLPAFVEAPPPATSAAATRRGEKKRNKTGIVLAIVMPTIAAMLLIVVAYFCCWRRRR PEEQTFLPYDIQSIDSLLLDLSTLRAATDDFAETKMIGRGGFGMVYKGVLPEGQEVAV KRLCQSSGQGIEELKSELVLVAKLYHKNLVRLIGVCLEQQEKILVYEYMSNKSLDTIL FDIDKNIELDWGKRFKIINGIAQGLQYLHEDSRLKIVHRDLKASNILLDFDYNPKISD FGLAKIFDGDQSKDITHRIAGTYGYMAPEYAMHGHYSVKLDVFSFGVLVLEIVTGRRN SGSYDSGQDLDLLNHVWGHWTRGNVVELIDPSLGNHPPIEQMLKCIHIGLLCVQKRPA SRPTISSVNIMLSSNTVRLPSLSRPAFCIQDVSASDSSNPHSTAVSSNDMSITDLVPR </aaseq>

Gene Sequence

<dnaseqindica>3267..3572#3035..3185#2686..2923#2135..2345#1941..2056#1555..1686#1..895#atgcccgcggccgcggcggcgcaccacctcgccggcgtcgccgcagccttcctcctcgccgtcctcctccacgtccacctcgccgccggtgaagacgaacctccaccgtggtacctgtgcgacccctacagcgcgagcggccgctactcggagaacagcacgttccaggccaacgtcaaccgcctctccgccaccctccccaggaacacctcctcgtctccggccatgtacgccacgggcgccgccggcgacgtcccggacaaggtgtacggctacgcgctctgccgcggcgacgtcgccgacgcccacgcctgcgagcgctgcgtcgcggccgccctccgcgacgcgccgcgggtgtgcccgctcgtcaaggacgcgctcgtcttccacgacctctgccagctccgctactccaaccgcaacttcctcctcgacgacgactactacgtcgccacgtactcgctccagcgctcctcccgcctcgtgagcgcgccggcgccggcggcggtggcggcgttcgacgcggccgtggccatgctcgccaacgccaccgcggagtacgccgcggcggcgaacacgtcgaggcggtacggcacggcggaggaggagggcgtcgacggcgacggcgacagcggccgccccaggatgtacgcgctggcgcagtgcacgccggacaaggcggcggacgtctgccgggcctgcctcacgacgctgaccaccgtgcagctgcccaagctctacagcggcgggaggacgggaggtggggtgttcggggtgtggtgcaacctccggtacgaggtgttccctttcttctccggccgcccgctgctgcatcttccggcgttcgtggaggcgccgccgccagcgacgtcggcggcggcgaccagaagaggaggtgagcgacagatggaaaccatttttacttgtttgcatgtgtgaaatcgccttagcgcatttgaataaattaatgcaaataattgaacaaaaaggttttgtgtgactccgttgactgcttgtagagttagagatgggagatgcattttcatcatttgggagcacattgcctgttttctgtacgtcaacaaaatagttactcctccactttagagtataagtcggtcttgattttgattaaagtcaaactatgttaagtttgatcaagtttctagaaaaaaaactagtaatattttataacccaagacaaatatattatcaaaatattcaatattaatttaatgaaactaatttggtgttctaaatattactatatttatctataaacttagttaaacgtaaagtgatttcagtcaaaacaacttataagttataatccgaaatggatggagtattattttttctaaaaaaaaagatatagtgccaattagcaatctggctctttgtgcgtttctgtcaagttttattgtcagaatctgtggaaaattccctgaaaaaatacacatgctacttgtaggcaaatggttttctttcattcaggttctggtcatagttctaactacagagatactatctgaatcgaacagtatttatttgcagagaaaaagaggaataagacaggtatagttctagccattgttatgcctacaattgctgcaatgctgctcatcgtcgtagcatacttttgttgttggaggaggagacgaccagaagaacagacgtttctgccctgtaagtcagctaaatttatgatatgttagcatgccaagtaattgataagtttatagacggcagggaaatggtgatttgtttaaatgttatttttatttaatttcatcaccttgattcttaatgtgtcccagcttgtagtgaaatcacatttcccttctttctctctcttttttttcttgaataagtgaaatcatatttcttgttaagcttagtctttcttttcatctttgtccaaacaacatcaattggttcagacgatattcaaagtattgattcgcttctactcgatctatcaacactacgagctgctacagatgattttgctgaaactaaaatgatcggcagaggagggttcggtatggtttacaaggtacaaatcatacagcgacatgcaactttatcagtcggttatatttttgttgatcagtaagtatgtttacatggatagggagtcctgcctgaaggtcaagaagtagctgtgaaaagactttgtcagagttccggacaaggaatagaagagcttaaaagtgagctagttttagttgctaagctttaccacaagaatcttgtaaggcttattggtgtttgcttggaacagcaagagaaaatacttgtctatgaatatatgtcaaataaaagccttgataccattcttttcggtacgattttctctccagtactccatgtgtttcttacactttaacttttttactaatcattttttagtttgataaaatttgtagataatataacgatatttttgacccaaaacaaacatattaacaaaatgtattcaatgctacaagtaatgaaactaatttggtgttgtcgatgttactaaattttatacacttgatcaaagctaaagaaatttgagtagagaaaaagttaaaacgacttgtaatataaaactataaaactaatgagtagtttcttttaaaaggcttaattgacaacatcaattattaatagtatgtttttttcttgtttgaatgacagatatagacaaaaacatagagctagattggggcaaaaggttcaagattataaatggaattgctcaaggcttgcaataccttcacgaagattctcgattgaagatagtgcaccgagacctcaaagcaagcaacattctattagactttgattacaaccctaagatttctgattttggcttggcgaagatatttgatggggatcaatcaaaagatatcactcatcgaattgccggaacatagtaagtagtaagtatgatatgttaggtttgaattttaacatgatcatggccaacatttatcaaatatggtataccaaatataataggttacaatgtaatgtttttttacagtggatacatggcgcctgaatacgccatgcatggtcattattcagtcaagttggacgtatttagtttcggcgttttggtactagagatcgtcactggaagaagaaatagtggctcatatgatagcgggcaagatcttgatctcttaaaccatgtgagtactttaagtctgttcatgaataattaatcaaacttctcaacatactacttgaataaatgaaccaatttggtgcaggtgtgggggcactggaccaggggaaatgttgtagagttgattgatccatccttgggcaaccatcctccgatcgagcagatgttgaagtgcatccacatcgggctgttgtgtgttcagaaaagacctgcaagcaggccgacgatttcgtcagtaaacatcatgcttagcagcaacactgttcgtctcccttctctatccaggccggctttctgcatccaggatgttagtgccagtgacagctctaatccgcattcaacagcggtgtcttcgaatgatatgtcaatcacagatcttgtgccgagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0540800, RefSeq:Os07g0540800