Os07g0541900

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0541900| Description = Similar to KI domain interacting kinase 1| Version = NM_001066436.1 GI:115472604 GeneID:4343505| Length = 4870 bp| ...")
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Gene Name

Os07g0541900

Description

Similar to KI domain interacting kinase 1

Version

NM_001066436.1 GI:115472604 GeneID:4343505

Length

4870 bp

Definition

Oryza sativa Japonica Group Os07g0541900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22074585..22079454

Sequence Coding Region

22074736..22075011,22075150..22075300,22075387..22075624,22075721..22075928,22077621..22077748
,22077845..22077982,22078557..22079391

Expression

GEO Profiles:Os07g0541900

Genome Context

<gbrowseImage1> name=NC_008400:22074585..22079454 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22074585..22079454 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggcggcgctcgtcgctcgtccacgccgtcctcctcgcggtcgcggcggtcgcgctgccgctcgccgccggccagccgtggccgagctgcggcaccggcggcacgtacgcggcgaacagcacctacgaaaccaacctcctggacctcatcagcgccctccaggggaacgcctcctcctcccccaccctctacgcctccggcgccgtcggctccggcggccgcgacgccgtctacggcgtcatgctctgccgcggcgacctgagcacctccgactgcaacgactgcggcaccagggccggccaggacgtggggcgagtctgcaaccgcaccagggacgccgccctcgtctacaaccagtgctacgtccgcgtctccgacgccgacttcctcgccgctgccaccaacaactccggcgaggtcgccctcatgagctccaccaacatcacccgcgccgccgacgtcagggcgtacgacgccgcggtggtcagcctcctgaacgccaccgtgcggtacgcggtggagaactcgacgaggatgttcgcgacggggcagcgggtggggagcgacccggggttcagcgacatctactccatggcgcagtgctcgccggcgctgtcgcggccgctgtgccggagctgcctcgacggcctcgtggggcagtggtgggacacgttcccggtgaacgtggagggcgcgaggatcgccggcacgcggtgtaacctgaggtcggagctgaaccagggcacgttctacactggccaaccgatggtggtgctgcgggccgacggactcgcgccggcgcaagggccggcgccggcggctacgacgggaggtaagaataattcagcaagcaaagttctggtaatcgtcgtgccgatagtggccgttgcaatcgtagctgcaacttccttttgtatatggaatgtgcgtaggaaaagaagatcaagaaaagcagaacatttctctgaacttgacgcatctgaggaccttgaaagtgtcaagtcgaccttgataactctagcgtcattgcaagtagcaacagataacttccacgaaagcaagaaactcggtgaagggggatttggtgcagtttataagggacttctttttggacaagaggtagccgtgaagaggctggcaaagggttcaaaccaagggctagaagagcttaagaacgagctagttctagtggccaaactgcatcacaagaatcttgttcgtcttgtggggttttgcctagaggagggagagaggttgcttgtctacaagtacataccgaataaaagccttgacatatttcttttcgactcggagcaaagcagacaacttgattgggcaacacgattcaagatcatcgaaggcattgctagaggactacaatatcttcaccaggactcacagaagaagatcatccaccgtgacatgaaggcgagcaacgtcttgctagatgcagacatgaacccaaagatcggcgacttcggcctcgctaggctctttgggcaggatcagactagagatgtcaccaatcgcatcgttggaacatttgggtacatgtctcctgaatacgtgatccgtgggcagtactctacaaagtcagacgtgtttagctttggcattctcgtcatagagatcgtgacgggacggagaaacagcggcccccatttcttagaacaaaacgaagatttaataagcatagtacggaggcactgggaagagggaaatattgtagagatgactgaccactccttgggaagaaactaccctgaagctgagctgctgaaatgtgtaagcatcggtctcctgtgcgtgcagcaaaaccctgtagatcggcctacaatggcagatgtcatggttttgcttaacagcgatgctaccagcactctgccggcttttgcaactcatagcccaacaatttccatcgaggggaactctggttactctcaaaccgttacacaattgtctcctagatag</cdnaseq>

Protein Sequence

<aaseq>MRRRSSLVHAVLLAVAAVALPLAAGQPWPSCGTGGTYAANSTYE TNLLDLISALQGNASSSPTLYASGAVGSGGRDAVYGVMLCRGDLSTSDCNDCGTRAGQ DVGRVCNRTRDAALVYNQCYVRVSDADFLAAATNNSGEVALMSSTNITRAADVRAYDA AVVSLLNATVRYAVENSTRMFATGQRVGSDPGFSDIYSMAQCSPALSRPLCRSCLDGL VGQWWDTFPVNVEGARIAGTRCNLRSELNQGTFYTGQPMVVLRADGLAPAQGPAPAAT TGGKNNSASKVLVIVVPIVAVAIVAATSFCIWNVRRKRRSRKAEHFSELDASEDLESV KSTLITLASLQVATDNFHESKKLGEGGFGAVYKGLLFGQEVAVKRLAKGSNQGLEELK NELVLVAKLHHKNLVRLVGFCLEEGERLLVYKYIPNKSLDIFLFDSEQSRQLDWATRF KIIEGIARGLQYLHQDSQKKIIHRDMKASNVLLDADMNPKIGDFGLARLFGQDQTRDV TNRIVGTFGYMSPEYVIRGQYSTKSDVFSFGILVIEIVTGRRNSGPHFLEQNEDLISI VRRHWEEGNIVEMTDHSLGRNYPEAELLKCVSIGLLCVQQNPVDRPTMADVMVLLNSD ATSTLPAFATHSPTISIEGNSGYSQTVTQLSPR</aaseq>

Gene Sequence

<dnaseqindica>4444..4719#4155..4305#3831..4068#3527..3734#1707..1834#1473..1610#64..898#agcttactagctttccatcatcccaccactgcctctgctaagctactctgaccggccggcgccatgcggcggcgctcgtcgctcgtccacgccgtcctcctcgcggtcgcggcggtcgcgctgccgctcgccgccggccagccgtggccgagctgcggcaccggcggcacgtacgcggcgaacagcacctacgaaaccaacctcctggacctcatcagcgccctccaggggaacgcctcctcctcccccaccctctacgcctccggcgccgtcggctccggcggccgcgacgccgtctacggcgtcatgctctgccgcggcgacctgagcacctccgactgcaacgactgcggcaccagggccggccaggacgtggggcgagtctgcaaccgcaccagggacgccgccctcgtctacaaccagtgctacgtccgcgtctccgacgccgacttcctcgccgctgccaccaacaactccggcgaggtcgccctcatgagctccaccaacatcacccgcgccgccgacgtcagggcgtacgacgccgcggtggtcagcctcctgaacgccaccgtgcggtacgcggtggagaactcgacgaggatgttcgcgacggggcagcgggtggggagcgacccggggttcagcgacatctactccatggcgcagtgctcgccggcgctgtcgcggccgctgtgccggagctgcctcgacggcctcgtggggcagtggtgggacacgttcccggtgaacgtggagggcgcgaggatcgccggcacgcggtgtaacctgaggtcggagctgaaccagggcacgttctacactggccaaccgatggtggtgctgcgggccgacggactcgcgccggcgcaagggccggcgccggcggctacgacgggaggtgagcatacaacatactccctccgtttcgaaatgtttgacgccattaactttttagtacatgtttgaccgttcgtcttattaaaaaattttaagtaactattaattctttttctattatttaattcattgttaaatatattttcatgtaggcatataattttacatatttcataaaagtttttgaataagacgaacggtcaaacatatgctaaaaagtcaacggtgtcaaacatttcaaaacggagagagtatttagttggagatgtattttcaatcctcgcggagaactggagatatccgctcatttcttacatatgccatccaaataatctatttaaattaatatgaaaaatatcagtccacaaaaatacatggttaaattcaacttctacaaaatccaataaaaaaaacaaattaaattgaaaatagttaacgtgcattcacaattatattttgtttgttgagaagcagctagcagcctagcactgtgttgttgtaatgaggtgctacatagaagaaaaggtacagtactttggatacttgaactgatcattttctatgcaaaagtgcaggtaagaataattcagcaagcaaagttctggtaatcgtcgtgccgatagtggccgttgcaatcgtagctgcaacttccttttgtatatggaatgtgcgtaggaaaagaagatcaagaaaagcagaacatttctctgaacgtgagtcctctacaaaatttagcgtagaattcttcaaaaattccatctaacattcgaatatcaattaactatatcaaattcatgtaaattttccagttgacgcatctgaggaccttgaaagtgtcaagtcgaccttgataactctagcgtcattgcaagtagcaacagataacttccacgaaagcaagaaactcggtgaagggggatttggtgcagtttataaggtaaactagcatgctggcccgcgcagattgcgcggctagcatcattatattttctctcatataatagcatatttgctttctcattatatttttcaaatatattaaaatgaaacataattttaaattttacaataactttatgaaactactaatgtgtaatattcatattgtatttttatatacgtgttagttattaattatttttaatatcaaattttagttatttgtaaattatatatattcctatatgtactatagacctgtcttttaatatttctttttttattccgaattttctgtaaattgtatttctatatagactctaagctcttcttccaatattatttatttttatttctgaatttttattatttctaattgtatttctatgtggactctaaactcatctttcaatattctttaatttttaatttcgaattttagttacttctaaatcgtattcctatattgactttaaactcttcttcccgtgtttttcttaatttcgaattttagttacttgtaaattgtatttttatacggactctaaactctacttttaattttattatgtgtattctgaattttagttagttttaaattcctatatggactctgtactctacttctaatattccttatttttttatttccgaatttctattctttttcttaattgtatttttatatggactctatactctacttctaatattccttatttttaattccgaatttcagttattttctaattatatttctatatggactctatgctctacttctaatattccttatttttaattccgaatttcagttacttcctaattgtatttctatatggactctagtctcctcttctaatattccttatttttaattctgaatttcagttatttcttaattgtatttctttatggactctagtctcctcttctaatattccttattttttaattccgaatttcagttatttctaaattgtatttctatatggactgtactctcctattctaatattccttattttttaattctgaatttcagctttgctttttctttttcttcgattaatgtgagaatttctatgccatgagagcggactgtactctcctattctaatatttcttattttttaattccaaatttcagctttgctttttctttttttccgattaatgtgagaatttctaggccatgagagcgaacgtggaggctactttttctattcctttaataatataatagatggtactccctccatcccaaaatataaaaaatttaagtgaatataatacattccagtactacgaatctgaacaggctaaaatatatcacatccacccataattctttatattttgggacgggagagtagtagttcacaggtaacttttgaacaattgctgatttccttttagaaaagaattattgatttgaaggtatgaatcgagaacggtaaaaatatgaaattctaaatatgtcttgattcctgagcgcactagtactccattgctaatttgttatagtttatttttacaaaagatctttgatctggctttattggaaaaaccaaatattgtaaattagtagcatatgcatgttagagtcttaagtcattacaaaattcaccatttctgtccatatctccatgtataaagcaaattagctaataaactaagaattattcagggacttctttttggacaagaggtagccgtgaagaggctggcaaagggttcaaaccaagggctagaagagcttaagaacgagctagttctagtggccaaactgcatcacaagaatcttgttcgtcttgtggggttttgcctagaggagggagagaggttgcttgtctacaagtacataccgaataaaagccttgacatatttcttttcggtacaattataattaccttttaatctacatatatatacccctttcgtttgctgacatgcaataattacaataatctcttcatcacgtgtcaattagactcggagcaaagcagacaacttgattgggcaacacgattcaagatcatcgaaggcattgctagaggactacaatatcttcaccaggactcacagaagaagatcatccaccgtgacatgaaggcgagcaacgtcttgctagatgcagacatgaacccaaagatcggcgacttcggcctcgctaggctctttgggcaggatcagactagagatgtcaccaatcgcatcgttggaacattgtaacgaagtcaaacactttatctgtttgtgcttatatgtagctaacaaactaacatgtacatttttttcttgttgttgcatgcagtgggtacatgtctcctgaatacgtgatccgtgggcagtactctacaaagtcagacgtgtttagctttggcattctcgtcatagagatcgtgacgggacggagaaacagcggcccccatttcttagaacaaaacgaagatttaataagcatagtgagtatcctgctaactcatagacaaatacggagtatattgataccgcttacattttaatatttgcatttgaagataaccatgcaatatatgatctgcaatattaacatataactcacaatatgtaactgattctaggtacggaggcactgggaagagggaaatattgtagagatgactgaccactccttgggaagaaactaccctgaagctgagctgctgaaatgtgtaagcatcggtctcctgtgcgtgcagcaaaaccctgtagatcggcctacaatggcagatgtcatggttttgcttaacagcgatgctaccagcactctgccggcttttgcaactcatagcccaacaatttccatcgaggggaactctggttactctcaaaccgttacacaattgtctcctagatagcagggggctaaaacatagttggtactagaaaataccccgcgagttgctgcgggatataatgtatctaaacaaaatgaagtgaaattctaagagaacaattgatccatcacatttagacatagtgcataccaataaaagaaagcgaaattct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0541900, RefSeq:Os07g0541900