BGIOSGA013849

From RiceWiki
Revision as of 15:52, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013849

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013849, complete gene.

LocusTag

OSJNBB0081B07.1

Ensembl Transcript ID

BGIOSGA013849-TA

Ensembl Protein ID

BGIOSGA013849-PA

Length

1515

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38987896..38989410

Sequence Coding Region

38987896..38988423,38988526..38989410

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38987896..38989410 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38987896..38989410 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCACCACCTTCGCCGGCGGTGGAGGGCGGCGCGGCCGCGGCCGCGGCCGGCCATGGCGGACGCGAGCGCCACGTCCTCCTGTTCCCGCTCCCGTACCAGGGCCACATCAACCCCATGCTCCGGCTCGCCGGCGTCCTCCGCGCCCGCGGCTTCGCCGTCACCGTCTTCCACACCCACTTCAACGCCCCGGACGCCGCGCGCCACCCGGAGCACCGCTTCGTCGCCGTCCCCGACGGCATGTCCGGCGCCCGCCCGCCGCCCGTCTCCGTCGGCGACGTCGTTAAGCACATCCGCGCGCTCAACGCCGCGTGCGAGGCCGCGTTCCGGGACCGCCTCGCCGCCGTCCTGGCCGAGTATTCCAGGGACGCCGTCGCGTGCCTCGTCGCCGACGCGCACCTCCTGCGCATGGTCGAGGTGGCCAGGCGGCTCGCCGTGCCCACCCTCGTGCTCCGCACCGGCAGCGCCGCCTGCTTCGCCAGCTTCCTCGCCTACCCGCTCCTCTGCGACAAAGGCTACCTCCCGCTCGACATGCCGGTGAGCGAGCTGCCGCCGTACCGCGTGCGCGACCTGATGCACATCGGAAGGGACGGCCACGAGCTGATGTGCGAGCTGCTGGCCCGCGCCGTGGCGGCGGTGAAGCTCTCGTCGGGGCTCATACTCAACACGTTCGACGCGCTCGAGGCGCCCGAGCTGGCCAAGCTCCGGCGAGACCTCGCCGTGCCGGTGTTCGACATCGGGCCGCTCCACAGGTTCTCCCCCGCCGCCGATGGCAGCCTGCTGCATCAGGACCGGAGCTGCCTCGCGTGGCTGGACGCGCAGGCGGCGGAGTCGGTGCTGTACGTGAGCTTCGGCAGCCTGGCGAGCATGGGCGCGCGGGAGCTCGTCGAGACGGCGTGGGGGATCGCCGGCAGCGGCGTGCCATTCCTCTGGGTGGTCCGGCCAGGCCTCGTCCGCGGGTGCGCGGCGCCGGGCGAGCCGACGCGGCTGCTGCTGCCGGAGGGGTTCGAGGCGGCGACGCGGCGGCGCGGGGTGGTGGTGGCGTGGGCGCCGCAGGAGGAGGTGCTGCGCCACCGCGCCGTGGGCGGGTTCTGGACGCACAGCGGGTGGAACTCGACGACGGAGAGCCTCGCCGAGGGGGTGCCGATGCTGTGCCGGCCAAGCTTCGGCGACCAGATGGGGAACGCGAGGTACGTGGAGCACGTGTGGAAGGCCGGGTTCGAGGTCGGCGGCGAGCTCGAGAGGGGGGCGGTGGAGGCGGCCATCCGGCGGCTCATGGCGGAGAGCGACGGCGGCGAGATGAGGGCGAGGGCGCGCGAGCTGAAGAAGGCGGCGGCGGAGTGCACCGGCAAGCCCGGCTCGTCGGAGATGGCCATCGTCAAAATGGTCACTCACATGCTGTCCCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MTPPPSPAVEGGAAAAAAGHGGRERHVLLFPLPYQGHINPMLRLAGVLRARGFAVTVFHTHFNAPDAARHPEHRFVAVPDGMSGARPPPVSVGDVVKHIRALNAACEAAFRDRLAAVLAEYSRDAVACLVADAHLLRMVEVARRLAVPTLVLRTGSAACFASFLAYPLLCDKGYLPLDMPVSELPPYRVRDLMHIGRDGHELMCELLARAVAAVKLSSGLILNTFDALEAPELAKLRRDLAVPVFDIGPLHRFSPAADGSLLHQDRSCLAWLDAQAAESVLYVSFGSLASMGARELVETAWGIAGSGVPFLWVVRPGLVRGCAAPGEPTRLLLPEGFEAATRRRGVVVAWAPQEEVLRHRAVGGFWTHSGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVGGELERGAVEAAIRRLMAESDGGEMRARARELKKAAAECTGKPGSSEMAIVKMVTHMLSL</aaseq>

Gene Sequence

<dnaseqindica>1..528#631..1515#ATGACGCCACCACCTTCGCCGGCGGTGGAGGGCGGCGCGGCCGCGGCCGCGGCCGGCCATGGCGGACGCGAGCGCCACGTCCTCCTGTTCCCGCTCCCGTACCAGGGCCACATCAACCCCATGCTCCGGCTCGCCGGCGTCCTCCGCGCCCGCGGCTTCGCCGTCACCGTCTTCCACACCCACTTCAACGCCCCGGACGCCGCGCGCCACCCGGAGCACCGCTTCGTCGCCGTCCCCGACGGCATGTCCGGCGCCCGCCCGCCGCCCGTCTCCGTCGGCGACGTCGTTAAGCACATCCGCGCGCTCAACGCCGCGTGCGAGGCCGCGTTCCGGGACCGCCTCGCCGCCGTCCTGGCCGAGTATTCCAGGGACGCCGTCGCGTGCCTCGTCGCCGACGCGCACCTCCTGCGCATGGTCGAGGTGGCCAGGCGGCTCGCCGTGCCCACCCTCGTGCTCCGCACCGGCAGCGCCGCCTGCTTCGCCAGCTTCCTCGCCTACCCGCTCCTCTGCGACAAAGGCTACCTCCCGGTGCAAGGCATGCCATGATCCAATCGATCTATCAACTGATTTGTTTCTCATCGATCGATTGATCCAATGATCCGACATGGTTTGGTTGCAGAGTCGTCGCAGCTCGACATGCCGGTGAGCGAGCTGCCGCCGTACCGCGTGCGCGACCTGATGCACATCGGAAGGGACGGCCACGAGCTGATGTGCGAGCTGCTGGCCCGCGCCGTGGCGGCGGTGAAGCTCTCGTCGGGGCTCATACTCAACACGTTCGACGCGCTCGAGGCGCCCGAGCTGGCCAAGCTCCGGCGAGACCTCGCCGTGCCGGTGTTCGACATCGGGCCGCTCCACAGGTTCTCCCCCGCCGCCGATGGCAGCCTGCTGCATCAGGACCGGAGCTGCCTCGCGTGGCTGGACGCGCAGGCGGCGGAGTCGGTGCTGTACGTGAGCTTCGGCAGCCTGGCGAGCATGGGCGCGCGGGAGCTCGTCGAGACGGCGTGGGGGATCGCCGGCAGCGGCGTGCCATTCCTCTGGGTGGTCCGGCCAGGCCTCGTCCGCGGGTGCGCGGCGCCGGGCGAGCCGACGCGGCTGCTGCTGCCGGAGGGGTTCGAGGCGGCGACGCGGCGGCGCGGGGTGGTGGTGGCGTGGGCGCCGCAGGAGGAGGTGCTGCGCCACCGCGCCGTGGGCGGGTTCTGGACGCACAGCGGGTGGAACTCGACGACGGAGAGCCTCGCCGAGGGGGTGCCGATGCTGTGCCGGCCAAGCTTCGGCGACCAGATGGGGAACGCGAGGTACGTGGAGCACGTGTGGAAGGCCGGGTTCGAGGTCGGCGGCGAGCTCGAGAGGGGGGCGGTGGAGGCGGCCATCCGGCGGCTCATGGCGGAGAGCGACGGCGGCGAGATGAGGGCGAGGGCGCGCGAGCTGAAGAAGGCGGCGGCGGAGTGCACCGGCAAGCCCGGCTCGTCGGAGATGGCCATCGTCAAAATGGTCACTCACATGCTGTCCCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013849